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    LOC100814025 NADH-quinone oxidoreductase subunit B 1 [ Glycine max (soybean) ]

    Gene ID: 100814025, updated on 26-Jun-2024

    Summary

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    Gene symbol
    LOC100814025
    Gene description
    NADH-quinone oxidoreductase subunit B 1
    Locus tag
    GLYMA_14G093300v4
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Glycine max
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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    Genomic context

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    See LOC100814025 in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    104 current Glycine_max_v4.0 (GCF_000004515.6) 14 NC_038250.2 (8922339..8924591, complement)
    103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 14 NC_038250.1 (8671760..8674076, complement)

    Chromosome 14 - NC_038250.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106795997 Neighboring gene small nucleolar RNA R16 Neighboring gene far upstream element-binding protein 1 Neighboring gene NADH-quinone oxidoreductase subunit B 1 Neighboring gene adenosine kinase 1-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables 4 iron, 4 sulfur cluster binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables NADH dehydrogenase (ubiquinone) activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables quinone binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in aerobic respiration IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in electron transport coupled proton transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in mitochondrial respiratory chain complex I assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    NADH-quinone oxidoreductase subunit B 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Glycine_max_v4.0 Primary Assembly

    Genomic

    1. NC_038250.2 Reference Glycine_max_v4.0 Primary Assembly

      Range
      8922339..8924591 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003544474.4 → XP_003544522.1  NADH-quinone oxidoreductase subunit B 1

      UniProtKB/TrEMBL
      I1M904
      Conserved Domains (1) summary
      PRK06411
      Location:56 → 207
      PRK06411; NADH-quinone oxidoreductase subunit NuoB
    Nucleotide Protein
    Heading Accession and Version

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