ATRX ATRX chromatin remodeler [Macaca mulatta (Rhesus monkey)] - Gene

Summary

Official Symbol: ATRXprovided by VGNC
Official Full Name: ATRX chromatin remodelerprovided by VGNC
Primary source: VGNC:VGNC:70195
See related: Ensembl:ENSMMUG00000022574
Gene type: protein coding
RefSeq status: MODEL
Organism: Macaca mulatta
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs: human mouse all
NEW: Try the new Gene table
Try the new Transcript table

Genomic context

Location:: chromosome: X

Exon count:: 36

Annotation release	Status	Assembly	Chr	Location
103	current	Mmul_10 (GCF_003339765.1)	X	NC_041774.1 (74196331..74480944, complement)
102	previous assembly	Mmul_8.0.1 (GCF_000772875.2)	X	NC_027913.1 (71306511..71595897, complement)

Chromosome X - NC_041774.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to reference sequence details

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the page Help

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

Go to the top of the page Help

Markers

RH47714 (e-PCR)
- UniSTS:57350

ATRX_1237 (e-PCR)
- UniSTS:277020

ATRX_v351 (e-PCR)
- UniSTS:277020

MARC_6759-6760:992007400:1 (e-PCR)
- UniSTS:231262

GDB:596198 (e-PCR)
- UniSTS:158053

GDB:596204 (e-PCR)
- UniSTS:158057

GDB:596209 (e-PCR)
- UniSTS:158060

GDB:596212 (e-PCR)
- UniSTS:158061

GDB:596216 (e-PCR)
- UniSTS:158063

GDB:596219 (e-PCR)
- UniSTS:158064

GDB:596225 (e-PCR)
- UniSTS:158067

GDB:596231 (e-PCR)
- UniSTS:158071

GDB:596234 (e-PCR)
- UniSTS:158072

GDB:596239 (e-PCR)
- UniSTS:158075

GDB:596244 (e-PCR)
- UniSTS:158076

GDB:596250 (e-PCR)
- UniSTS:158077

GDB:596255 (e-PCR)
- UniSTS:158078

GDB:596258 (e-PCR)
- UniSTS:158079

GDB:596262 (e-PCR)
- UniSTS:158080

GDB:596276 (e-PCR)
- UniSTS:158082

GDB:596281 (e-PCR)
- UniSTS:158084

GDB:596290 (e-PCR)
- UniSTS:158086

GDB:596303 (e-PCR)
- UniSTS:158089

GDB:596309 (e-PCR)
- UniSTS:158091

DXS9779 (e-PCR)
- UniSTS:75921

SHGC-6680 (e-PCR)
- UniSTS:15519

NoName (e-PCR)
- UniSTS:99785

DXS56 (e-PCR)
- UniSTS:148171

Homology

NCBI Orthologs

Orthologs from OrthoDB

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables ATP binding	IEA Inferred from Electronic Annotation more info	PubMed
enables ATP-dependent chromatin remodeler activity	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

Go to the top of the page Help

Preferred Names: transcriptional regulator ATRX

XP_001099769.2

EC 3.6.4.12

XP_001099874.2

EC 3.6.4.12

XP_014983197.1

EC 3.6.4.12

XP_014983198.1

EC 3.6.4.12

XP_014983199.1

EC 3.6.4.12

XP_014983200.1

EC 3.6.4.12

XP_014983201.1

EC 3.6.4.12

XP_014983202.1

EC 3.6.4.12

XP_014983203.1

EC 3.6.4.12

XP_014983204.1

EC 3.6.4.12

XP_028698346.1

EC 3.6.4.12

XP_028698347.1

EC 3.6.4.12

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

NC_041774.1 Reference Mmul_10 Primary Assembly

Range

74196331..74480944 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_001099769.4 → XP_001099769.2 transcriptional regulator ATRX isoform X4

UniProtKB/TrEMBL

H9ZAD4

Conserved Domains (4) summary

cd00046
Location:1548 → 1710

DEXDc; DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.

cd00079
Location:1977 → 2123

HELICc; Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast initiation factor 4A, Ski2p, and Hepatitis C virus NS3 helicases; this domain is found in a wide variety of helicases and helicase related proteins; may ...

cd11726
Location:129 → 232

ADDz_ATRX; ADDz domain found in ATRX (alpha-thalassemia/mental retardation, X-linked)

pfam00176
Location:1523 → 1849

SNF2_N; SNF2 family N-terminal domain
XM_028842513.1 → XP_028698346.1 transcriptional regulator ATRX isoform X8

UniProtKB/TrEMBL

A0A5F8A4B1

Conserved Domains (5) summary

PTZ00121
Location:793 → 1391

PTZ00121; MAEBL; Provisional

COG0553
Location:1474 → 2124

HepA; Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination and repair]

PTZ00108
Location:654 → 857

PTZ00108; DNA topoisomerase 2-like protein; Provisional

cd11726
Location:167 → 270

ADDz_ATRX; ADDz domain found in ATRX (alpha-thalassemia/mental retardation, X-linked)

cd18068
Location:1499 → 1742

DEXHc_ATRX; DEXH-box helicase domain of ATRX
XM_001099874.4 → XP_001099874.2 transcriptional regulator ATRX isoform X1

UniProtKB/TrEMBL

F6ZEI1, F6ZEY8, H9ZAD4

Related

ENSMMUP00000029720.4, ENSMMUT00000031765.4

Conserved Domains (4) summary

cd00046
Location:1586 → 1748

DEXDc; DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.

cd00079
Location:2015 → 2161

HELICc; Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast initiation factor 4A, Ski2p, and Hepatitis C virus NS3 helicases; this domain is found in a wide variety of helicases and helicase related proteins; may ...

cd11726
Location:167 → 270

ADDz_ATRX; ADDz domain found in ATRX (alpha-thalassemia/mental retardation, X-linked)

pfam00176
Location:1561 → 1887

SNF2_N; SNF2 family N-terminal domain
XM_015127717.2 → XP_014983203.1 transcriptional regulator ATRX isoform X9

UniProtKB/TrEMBL

A0A5F8AI56

Related

ENSMMUP00000077585.1, ENSMMUT00000107563.1

Conserved Domains (4) summary

cd00046
Location:1518 → 1680

DEXDc; DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.

cd00079
Location:1947 → 2093

HELICc; Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast initiation factor 4A, Ski2p, and Hepatitis C virus NS3 helicases; this domain is found in a wide variety of helicases and helicase related proteins; may ...

cd11726
Location:128 → 231

ADDz_ATRX; ADDz domain found in ATRX (alpha-thalassemia/mental retardation, X-linked)

pfam00176
Location:1493 → 1819

SNF2_N; SNF2 family N-terminal domain
XM_015127714.2 → XP_014983200.1 transcriptional regulator ATRX isoform X6

UniProtKB/TrEMBL

H9ZAD4

Related

ENSMMUP00000029719.4, ENSMMUT00000031764.4

Conserved Domains (4) summary

cd00046
Location:1547 → 1709

DEXDc; DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.

cd00079
Location:1976 → 2122

HELICc; Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast initiation factor 4A, Ski2p, and Hepatitis C virus NS3 helicases; this domain is found in a wide variety of helicases and helicase related proteins; may ...

cd11726
Location:128 → 231

ADDz_ATRX; ADDz domain found in ATRX (alpha-thalassemia/mental retardation, X-linked)

pfam00176
Location:1522 → 1848

SNF2_N; SNF2 family N-terminal domain
XM_015127711.2 → XP_014983197.1 transcriptional regulator ATRX isoform X2

UniProtKB/TrEMBL

F6ZEY8, H9ZAD4

Conserved Domains (4) summary

cd00046
Location:1585 → 1747

DEXDc; DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.

cd00079
Location:2014 → 2160

HELICc; Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast initiation factor 4A, Ski2p, and Hepatitis C virus NS3 helicases; this domain is found in a wide variety of helicases and helicase related proteins; may ...

cd11726
Location:166 → 269

ADDz_ATRX; ADDz domain found in ATRX (alpha-thalassemia/mental retardation, X-linked)

pfam00176
Location:1560 → 1886

SNF2_N; SNF2 family N-terminal domain
XM_015127712.2 → XP_014983198.1 transcriptional regulator ATRX isoform X3

UniProtKB/TrEMBL

F6UJ05, F6ZEY8

Related

ENSMMUP00000040966.3, ENSMMUT00000047933.3

Conserved Domains (4) summary

cd00046
Location:1557 → 1719

DEXDc; DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.

cd00079
Location:1986 → 2132

HELICc; Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast initiation factor 4A, Ski2p, and Hepatitis C virus NS3 helicases; this domain is found in a wide variety of helicases and helicase related proteins; may ...

cd11726
Location:167 → 270

ADDz_ATRX; ADDz domain found in ATRX (alpha-thalassemia/mental retardation, X-linked)

pfam00176
Location:1532 → 1858

SNF2_N; SNF2 family N-terminal domain
XM_015127713.2 → XP_014983199.1 transcriptional regulator ATRX isoform X5

UniProtKB/TrEMBL

F6ZEY8

Conserved Domains (4) summary

cd00046
Location:1547 → 1709

DEXDc; DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.

cd00079
Location:1976 → 2122

HELICc; Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast initiation factor 4A, Ski2p, and Hepatitis C virus NS3 helicases; this domain is found in a wide variety of helicases and helicase related proteins; may ...

cd11726
Location:128 → 231

ADDz_ATRX; ADDz domain found in ATRX (alpha-thalassemia/mental retardation, X-linked)

pfam00176
Location:1522 → 1848

SNF2_N; SNF2 family N-terminal domain
XM_015127718.2 → XP_014983204.1 transcriptional regulator ATRX isoform X11

UniProtKB/TrEMBL

H9ZAD4

Conserved Domains (5) summary

cd00079
Location:1922 → 2068

HELICc; Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast initiation factor 4A, Ski2p, and Hepatitis C virus NS3 helicases; this domain is found in a wide variety of helicases and helicase related proteins; may ...

cd11726
Location:74 → 177

ADDz_ATRX; ADDz domain found in ATRX (alpha-thalassemia/mental retardation, X-linked)

pfam00176
Location:1468 → 1794

SNF2_N; SNF2 family N-terminal domain

cl25574
Location:561 → 764

TOP2c; TopoisomeraseII

cl26511
Location:700 → 1339

Neuromodulin_N; Gap junction protein N-terminal region
XM_028842514.1 → XP_028698347.1 transcriptional regulator ATRX isoform X10

UniProtKB/TrEMBL

F6ZEY8

Conserved Domains (5) summary

PTZ00121
Location:709 → 1348

PTZ00121; MAEBL; Provisional

COG0553
Location:1449 → 2099

HepA; Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination and repair]

PTZ00108
Location:570 → 773

PTZ00108; DNA topoisomerase 2-like protein; Provisional

cd11726
Location:112 → 215

ADDz_ATRX; ADDz domain found in ATRX (alpha-thalassemia/mental retardation, X-linked)

cd18068
Location:1474 → 1717

DEXHc_ATRX; DEXH-box helicase domain of ATRX
XM_015127716.2 → XP_014983202.1 transcriptional regulator ATRX isoform X7

UniProtKB/TrEMBL

F6ZEY8

Conserved Domains (5) summary

PTZ00121
Location:738 → 1377

PTZ00121; MAEBL; Provisional

COG0553
Location:1478 → 2128

HepA; Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination and repair]

PTZ00108
Location:599 → 802

PTZ00108; DNA topoisomerase 2-like protein; Provisional

cd11726
Location:112 → 215

ADDz_ATRX; ADDz domain found in ATRX (alpha-thalassemia/mental retardation, X-linked)

cd18068
Location:1503 → 1746

DEXHc_ATRX; DEXH-box helicase domain of ATRX
XM_015127715.2 → XP_014983201.1 transcriptional regulator ATRX isoform X7

UniProtKB/TrEMBL

F6ZEY8

Conserved Domains (5) summary

PTZ00121
Location:738 → 1377

PTZ00121; MAEBL; Provisional

COG0553
Location:1478 → 2128

HepA; Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination and repair]

PTZ00108
Location:599 → 802

PTZ00108; DNA topoisomerase 2-like protein; Provisional

cd11726
Location:112 → 215

ADDz_ATRX; ADDz domain found in ATRX (alpha-thalassemia/mental retardation, X-linked)

cd18068
Location:1503 → 1746

DEXHc_ATRX; DEXH-box helicase domain of ATRX