U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    LRCH3 leucine rich repeats and calponin homology domain containing 3 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 722180, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    LRCH3provided by VGNC
    Official Full Name
    leucine rich repeats and calponin homology domain containing 3provided by VGNC
    Primary source
    VGNC:VGNC:74382
    See related
    Ensembl:ENSMMUG00000000184
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LRCH3 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    23
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 2 NC_041755.1 (285093..386606, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 2 NC_027894.1 (204436553..204536710)

    Chromosome 2 - NC_041755.1Genomic Context describing neighboring genes Neighboring gene ribosomal protein L35a Neighboring gene IQ motif containing G Neighboring gene U6 spliceosomal RNA Neighboring gene forty-two-three domain containing 1 Neighboring gene microRNA mir-922

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    leucine-rich repeat and calponin homology domain-containing protein 3

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041755.1 Reference Mmul_10 Primary Assembly

      Range
      285093..386606 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028843512.1 → XP_028699345.1  leucine-rich repeat and calponin homology domain-containing protein 3 isoform X9

      UniProtKB/TrEMBL
      A0A5F8AAE8
      Related
      ENSMMUP00000037549.3, ENSMMUT00000044535.3
      Conserved Domains (3) summary
      smart00033
      Location:633 → 707
      CH; Calponin homology domain
      COG4886
      Location:77 → 285
      LRR; Leucine-rich repeat (LRR) protein [Transcription]
      sd00033
      Location:61 → 83
      LRR_RI; leucine-rich repeat [structural motif]

    2. XM_015132636.2 → XP_014988122.1  leucine-rich repeat and calponin homology domain-containing protein 3 isoform X6

      UniProtKB/TrEMBL
      A0A5F7ZRR7, A0A5F8AAE8
      Related
      ENSMMUP00000067332.1, ENSMMUT00000082910.1
      Conserved Domains (4) summary
      sd00033
      Location:61 → 83
      LRR_RI; leucine-rich repeat [structural motif]
      pfam00307
      Location:626 → 734
      CH; Calponin homology (CH) domain
      pfam12799
      Location:106 → 144
      LRR_4; Leucine Rich repeats (2 copies)
      pfam13855
      Location:152 → 208
      LRR_8; Leucine rich repeat

    3. XM_015132637.2 → XP_014988123.1  leucine-rich repeat and calponin homology domain-containing protein 3 isoform X8

      UniProtKB/TrEMBL
      A0A5F8A552
      Conserved Domains (4) summary
      smart00033
      Location:657 → 731
      CH; Calponin homology domain
      sd00033
      Location:61 → 83
      LRR_RI; leucine-rich repeat [structural motif]
      pfam12799
      Location:106 → 144
      LRR_4; Leucine Rich repeats (2 copies)
      pfam13855
      Location:152 → 208
      LRR_8; Leucine rich repeat

    4. XM_028843511.1 → XP_028699344.1  leucine-rich repeat and calponin homology domain-containing protein 3 isoform X7

      UniProtKB/TrEMBL
      A0A5F8A552
      Conserved Domains (3) summary
      smart00033
      Location:657 → 731
      CH; Calponin homology domain
      COG4886
      Location:77 → 285
      LRR; Leucine-rich repeat (LRR) protein [Transcription]
      sd00033
      Location:61 → 83
      LRR_RI; leucine-rich repeat [structural motif]

    5. XM_015132633.2 → XP_014988119.1  leucine-rich repeat and calponin homology domain-containing protein 3 isoform X4

      UniProtKB/TrEMBL
      A0A1D5R9K1, A0A5F8A552
      Related
      ENSMMUP00000070586.1, ENSMMUT00000094483.1
      Conserved Domains (4) summary
      sd00033
      Location:61 → 83
      LRR_RI; leucine-rich repeat [structural motif]
      pfam00307
      Location:650 → 758
      CH; Calponin homology (CH) domain
      pfam12799
      Location:106 → 144
      LRR_4; Leucine Rich repeats (2 copies)
      pfam13855
      Location:152 → 208
      LRR_8; Leucine rich repeat

    6. XM_015132635.2 → XP_014988121.1  leucine-rich repeat and calponin homology domain-containing protein 3 isoform X5

      UniProtKB/TrEMBL
      A0A1D5QCK2, A0A5F8AAE8
      Related
      ENSMMUP00000045771.2, ENSMMUT00000077599.2
      Conserved Domains (4) summary
      smart00033
      Location:615 → 717
      CH; Calponin homology domain
      sd00033
      Location:61 → 83
      LRR_RI; leucine-rich repeat [structural motif]
      pfam12799
      Location:106 → 144
      LRR_4; Leucine Rich repeats (2 copies)
      pfam13855
      Location:152 → 208
      LRR_8; Leucine rich repeat

    7. XM_015132631.2 → XP_014988117.1  leucine-rich repeat and calponin homology domain-containing protein 3 isoform X2

      UniProtKB/TrEMBL
      A0A5F8A552
      Conserved Domains (4) summary
      smart00033
      Location:639 → 741
      CH; Calponin homology domain
      sd00033
      Location:61 → 83
      LRR_RI; leucine-rich repeat [structural motif]
      pfam12799
      Location:106 → 144
      LRR_4; Leucine Rich repeats (2 copies)
      pfam13855
      Location:152 → 208
      LRR_8; Leucine rich repeat

    8. XM_015132632.2 → XP_014988118.1  leucine-rich repeat and calponin homology domain-containing protein 3 isoform X3

      UniProtKB/TrEMBL
      A0A5F8AAE8
      Conserved Domains (4) summary
      smart00033
      Location:633 → 735
      CH; Calponin homology domain
      sd00033
      Location:61 → 83
      LRR_RI; leucine-rich repeat [structural motif]
      pfam12799
      Location:106 → 144
      LRR_4; Leucine Rich repeats (2 copies)
      pfam13855
      Location:152 → 208
      LRR_8; Leucine rich repeat

    9. XM_015132630.2 → XP_014988116.1  leucine-rich repeat and calponin homology domain-containing protein 3 isoform X1

      UniProtKB/TrEMBL
      A0A5F8A552
      Conserved Domains (4) summary
      smart00033
      Location:657 → 759
      CH; Calponin homology domain
      sd00033
      Location:61 → 83
      LRR_RI; leucine-rich repeat [structural motif]
      pfam12799
      Location:106 → 144
      LRR_4; Leucine Rich repeats (2 copies)
      pfam13855
      Location:152 → 208
      LRR_8; Leucine rich repeat

    10. XM_028843513.1 → XP_028699346.1  leucine-rich repeat and calponin homology domain-containing protein 3 isoform X10

      Conserved Domains (2) summary
      COG4886
      Location:77 → 285
      LRR; Leucine-rich repeat (LRR) protein [Transcription]
      sd00033
      Location:61 → 83
      LRR_RI; leucine-rich repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.