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    LAMP3 lysosomal associated membrane protein 3 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 574213, updated on 17-Aug-2024

    Summary

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    Official Symbol
    LAMP3provided by VGNC
    Official Full Name
    lysosomal associated membrane protein 3provided by VGNC
    Primary source
    VGNC:VGNC:74045
    See related
    Ensembl:ENSMMUG00000010555
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See LAMP3 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 2 NC_041755.1 (88379254..88434521, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 2 NC_027894.1 (109904566..109960331)

    Chromosome 2 - NC_041755.1Genomic Context describing neighboring genes Neighboring gene defective in cullin neddylation 1 domain containing 1 Neighboring gene uncharacterized LOC114676305 Neighboring gene methylcrotonyl-CoA carboxylase subunit 1 Neighboring gene non-histone chromosomal protein HMG-17 pseudogene Neighboring gene MCF.2 cell line derived transforming sequence-like 2 Neighboring gene UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5 Neighboring gene uncharacterized LOC114676306

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Restricted SIV replication in rhesus macaque lung tissues during the acute phase of infection. Fuller CL, et al. Am J Pathol, 2002 Sep. PMID 12213725, Free PMC Article
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    lysosome-associated membrane glycoprotein 3
    Names
    DC LAMP
    DC-lysosome-associated membrane glycoprotein
    LAMP-3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001032872.1 → NP_001028044.1  lysosome-associated membrane glycoprotein 3 precursor

      See identical proteins and their annotated locations for NP_001028044.1

      Status: PROVISIONAL

      Source sequence(s)
      AF416334
      UniProtKB/Swiss-Prot
      Q8MJJ2
      UniProtKB/TrEMBL
      G7MJ70
      Related
      ENSMMUP00000074108.1, ENSMMUT00000083884.1
      Conserved Domains (1) summary
      pfam01299
      Location:124 → 416
      Lamp; Lysosome-associated membrane glycoprotein (Lamp)

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041755.1 Reference Mmul_10 Primary Assembly

      Range
      88379254..88434521 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015131495.2 → XP_014986981.1  lysosome-associated membrane glycoprotein 3 isoform X2

      UniProtKB/TrEMBL
      G7MJ70
      Conserved Domains (1) summary
      pfam01299
      Location:124 → 372
      Lamp; Lysosome-associated membrane glycoprotein (Lamp)

    2. XM_015131494.2 → XP_014986980.1  lysosome-associated membrane glycoprotein 3 isoform X1

      UniProtKB/TrEMBL
      A0A5F7ZF43, G7MJ70
      Related
      ENSMMUP00000064209.1, ENSMMUT00000107486.1
      Conserved Domains (1) summary
      pfam01299
      Location:124 → 418
      Lamp; Lysosome-associated membrane glycoprotein (Lamp)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8MJJ2.1 GenPept UniProtKB/Swiss-Prot:Q8MJJ2

    Gene LinkOut

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