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    LOC100374550 cyclin-F-like [ Saccoglossus kowalevskii ]

    Gene ID: 100374550, updated on 22-Jan-2025

    Summary

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    Gene symbol
    LOC100374550
    Gene description
    cyclin-F-like
    See related
    EnsemblRapid:LOC100374550
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Saccoglossus kowalevskii
    Lineage
    Eukaryota; Metazoa; Hemichordata; Enteropneusta; Harrimaniidae; Saccoglossus
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    Genomic context

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    See LOC100374550 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    101 current Skow_1.1 (GCF_000003605.2) Unplaced Scaffold NW_003151259.1 (214519..225990, complement)

    NW_003151259.1Genomic Context describing neighboring genes Neighboring gene tyrosine--tRNA ligase, mitochondrial-like Neighboring gene uncharacterized LOC100373492 Neighboring gene protein HID1-like Neighboring gene 5-azacytidine-induced protein 1-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_003151259 unplaced scaffold reference Skow_1.1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cyclin-dependent protein serine/threonine kinase regulator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in mitotic cell cycle phase transition IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of cyclin-dependent protein serine/threonine kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in centrosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of cyclin-dependent protein kinase holoenzyme complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cyclin-F-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Saccoglossus kowalevskii Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Skow_1.1 Primary Assembly

    Genomic

    1. NW_003151259.1 Reference Skow_1.1 Primary Assembly

      Range
      214519..225990 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006823939.1 → XP_006824002.1  cyclin-F-like

      Related
      XP_006824002.1, XM_006823939.1
      Conserved Domains (3) summary
      smart00256
      Location:23 → 61
      FBOX; A Receptor for Ubiquitination Targets
      pfam00134
      Location:270 → 392
      Cyclin_N; Cyclin, N-terminal domain
      pfam02984
      Location:394 → 515
      Cyclin_C; Cyclin, C-terminal domain
    Nucleotide Protein
    Heading Accession and Version

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