U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    LOC100246937 tubby-like F-box protein 8 [ Vitis vinifera (wine grape) ]

    Gene ID: 100246937, updated on 3-Dec-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC100246937
    Gene description
    tubby-like F-box protein 8
    Locus tag
    VIT_00034528001
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Vitis vinifera
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; Vitales; Vitaceae; Viteae; Vitis
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC100246937 in Genome Data Viewer
    Location:
    chromosome: 18
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ASM3070453v1 (GCF_030704535.1) 18 NC_081822.1 (24217500..24223493, complement)
    102 previous assembly 12X (GCF_000003745.3) 18 NC_012024.3 (19867314..19873294, complement)

    Chromosome 18 - NC_081822.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC109121621 Neighboring gene uncharacterized LOC104882691 Neighboring gene small nucleolar RNA snoR118 Neighboring gene uncharacterized LOC104882677 Neighboring gene auxin-induced protein 5NG4-like Neighboring gene trihelix transcription factor DF1

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    tubby-like F-box protein 8

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_030704535.1-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3070453v1 Primary Assembly

    Genomic

    1. NC_081822.1 Reference ASM3070453v1 Primary Assembly

      Range
      24217500..24223493 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_010666827.3 → XP_010665129.1  tubby-like F-box protein 8 isoform X1

      See identical proteins and their annotated locations for XP_010665129.1

      UniProtKB/TrEMBL
      A5AJR7
      Conserved Domains (2) summary
      pfam01167
      Location:116 → 420
      Tub; Tub family
      pfam12937
      Location:53 → 95
      F-box-like

    2. XM_010666825.3 → XP_010665127.1  tubby-like F-box protein 8 isoform X1

      See identical proteins and their annotated locations for XP_010665127.1

      UniProtKB/TrEMBL
      A5AJR7
      Conserved Domains (2) summary
      pfam01167
      Location:116 → 420
      Tub; Tub family
      pfam12937
      Location:53 → 95
      F-box-like

    3. XM_002267878.4 → XP_002267914.1  tubby-like F-box protein 8 isoform X1

      See identical proteins and their annotated locations for XP_002267914.1

      UniProtKB/TrEMBL
      A5AJR7
      Conserved Domains (2) summary
      pfam01167
      Location:116 → 420
      Tub; Tub family
      pfam12937
      Location:53 → 95
      F-box-like

    4. XM_059735056.1 → XP_059591039.1  tubby-like F-box protein 8 isoform X2

      UniProtKB/TrEMBL
      A5AJR7, F6GY33

    5. XM_059735059.1 → XP_059591042.1  tubby-like F-box protein 8 isoform X2

      UniProtKB/TrEMBL
      A5AJR7, F6GY33

    6. XM_019216713.2 → XP_019072258.1  tubby-like F-box protein 8 isoform X1

      UniProtKB/TrEMBL
      A5AJR7
      Conserved Domains (2) summary
      pfam01167
      Location:116 → 420
      Tub; Tub family
      pfam12937
      Location:53 → 95
      F-box-like

    7. XM_019216712.2 → XP_019072257.1  tubby-like F-box protein 8 isoform X1

      UniProtKB/TrEMBL
      A5AJR7
      Conserved Domains (2) summary
      pfam01167
      Location:116 → 420
      Tub; Tub family
      pfam12937
      Location:53 → 95
      F-box-like

    8. XM_010666826.3 → XP_010665128.1  tubby-like F-box protein 8 isoform X1

      See identical proteins and their annotated locations for XP_010665128.1

      UniProtKB/TrEMBL
      A5AJR7
      Conserved Domains (2) summary
      pfam01167
      Location:116 → 420
      Tub; Tub family
      pfam12937
      Location:53 → 95
      F-box-like

    9. XM_059735057.1 → XP_059591040.1  tubby-like F-box protein 8 isoform X2

      UniProtKB/TrEMBL
      A5AJR7, F6GY33

    10. XM_059735055.1 → XP_059591038.1  tubby-like F-box protein 8 isoform X1

      UniProtKB/TrEMBL
      A5AJR7

    11. XM_059735058.1 → XP_059591041.1  tubby-like F-box protein 8 isoform X2

      UniProtKB/TrEMBL
      A5AJR7, F6GY33
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials