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    g6pd glucose-6-phosphate dehydrogenase [ Pimephales promelas (fathead minnow) ]

    Gene ID: 120488160, updated on 21-Mar-2024

    Summary

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    Gene symbol
    g6pd
    Gene description
    glucose-6-phosphate dehydrogenase
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pimephales promelas
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Leuciscidae; Pogonichthyinae; Pimephales
    Orthologs
    human zebrafish all
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    Genomic context

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    See g6pd in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    100 current EPA_FHM_2.0 (GCF_016745375.1) Unplaced Scaffold NW_024121299.1 (1553179..1573467, complement)

    NW_024121299.1Genomic Context describing neighboring genes Neighboring gene voltage-dependent L-type calcium channel subunit beta-3-like Neighboring gene N-alpha-acetyltransferase 10, NatA catalytic subuni Neighboring gene polypeptide N-acetylgalactosaminyltransferase 6-like Neighboring gene testis-expressed protein 49-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_024121299 Unplaced Scaffold Reference EPA_FHM_2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Toxicogenomics of water chemistry influence on chronic lead exposure to the fathead minnow (Pimephales promelas). Mager EM, et al. Aquat Toxicol, 2008 May 1. PMID 18346799
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables NADP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables glucose-6-phosphate dehydrogenase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in glucose metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in pentose-phosphate shunt, oxidative branch IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    glucose-6-phosphate 1-dehydrogenase
    Names
    glucose-6-phosphate-1-dehydrogenase

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Pimephales promelas Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference EPA_FHM_2.0 Primary Assembly

    Genomic

    1. NW_024121299.1 Reference EPA_FHM_2.0 Primary Assembly

      Range
      1553179..1573467 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_039684685.1 → XP_039540619.1  glucose-6-phosphate 1-dehydrogenase isoform X1

      UniProtKB/TrEMBL
      B2BP35
      Conserved Domains (1) summary
      PTZ00309
      Location:74 → 560
      PTZ00309; glucose-6-phosphate 1-dehydrogenase; Provisional

    2. XM_039684687.1 → XP_039540621.1  glucose-6-phosphate 1-dehydrogenase isoform X3

      UniProtKB/TrEMBL
      B2BP35
      Conserved Domains (1) summary
      PTZ00309
      Location:28 → 514
      PTZ00309; glucose-6-phosphate 1-dehydrogenase; Provisional

    3. XM_039684686.1 → XP_039540620.1  glucose-6-phosphate 1-dehydrogenase isoform X2

      UniProtKB/TrEMBL
      B2BP35
      Conserved Domains (1) summary
      PTZ00309
      Location:63 → 549
      PTZ00309; glucose-6-phosphate 1-dehydrogenase; Provisional

    4. XM_039684689.1 → XP_039540623.1  glucose-6-phosphate 1-dehydrogenase isoform X3

      UniProtKB/TrEMBL
      B2BP35
      Conserved Domains (1) summary
      PTZ00309
      Location:28 → 514
      PTZ00309; glucose-6-phosphate 1-dehydrogenase; Provisional

    5. XM_039684690.1 → XP_039540624.1  glucose-6-phosphate 1-dehydrogenase isoform X3

      UniProtKB/TrEMBL
      B2BP35
      Conserved Domains (1) summary
      PTZ00309
      Location:28 → 514
      PTZ00309; glucose-6-phosphate 1-dehydrogenase; Provisional

    6. XM_039684688.1 → XP_039540622.1  glucose-6-phosphate 1-dehydrogenase isoform X3

      UniProtKB/TrEMBL
      B2BP35
      Conserved Domains (1) summary
      PTZ00309
      Location:28 → 514
      PTZ00309; glucose-6-phosphate 1-dehydrogenase; Provisional
    Nucleotide Protein
    Heading Accession and Version

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