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    stcD putative outer membrane lipoprotein [ Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 ]

    Gene ID: 1253670, updated on 6-Jun-2024

    Summary

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    Gene symbol
    stcD
    Gene description
    putative outer membrane lipoprotein
    Locus tag
    STM2149
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 (strain: LT2, serovar: Typhimurium, sub-species: enterica, culture-collection: ATCC:700720, culture-collection: SGSC:1412, type-material: type strain of Salmonella enterica)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella
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    Genomic context

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    Sequence:
    NC_003197.2 (2242830..2243848, complement)

    NC_003197.2Genomic Context describing neighboring genes Neighboring gene hydroxy-methylpyrimidine kinase (HMP kinase) Neighboring gene hydoxyethylthiazole kinase (THZ kinase) Neighboring gene putative periplasmic protein Neighboring gene putative outer membrane protein Neighboring gene putative periplasmic chaperone protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003197.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Complete genome sequence of Salmonella enterica serovar Typhimurium LT2. McClelland M, et al. Nature, 2001 Oct 25. PMID 11677609

    GeneRIFs: Gene References Into Functions

    General gene information

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    regulatory

    • Loc: c2243848-2243843 regulatory_class = ribosome_binding_site

    General protein information

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    Preferred Names
    putative outer membrane lipoprotein
    NP_461093.1
    • similar to E. coli putative type-1 fimbrial protein (AAC75169.1); Blastp hit to AAC75169.1 (344 aa), 50% identity in aa 3 - 344

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003197.2 Reference assembly

      Range
      2242830..2243848 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_461093.1 putative outer membrane lipoprotein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]

      See identical proteins and their annotated locations for NP_461093.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A0A7CZZ1, A0A0A7D0Z2, A0A3Z3U3D9, A0A5T2YBV9, A0A5T7SCE7, A0A5X0ZNZ3, A0A6X8Q7M7, A0A729FHW6, A0A739DUF8, A0A754P1J7, A0A758YGN6
      Conserved Domains (1) summary
      PRK15252
      Location:1 → 335
      PRK15252; putative fimbrial-like adhesin protein
    Nucleotide Protein
    Heading Accession and Version

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