U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    LOC114245257 protein spaetzle-like [ Bombyx mandarina (wild silkworm) ]

    Gene ID: 114245257, updated on 21-Dec-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC114245257
    Gene description
    protein spaetzle-like
    See related
    EnsemblRapid:LOC114245257
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Bombyx mandarina
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Bombycoidea; Bombycidae; Bombycinae; Bombyx
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC114245257 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    100 current ASM398793v1 (GCF_003987935.1) Unplaced Scaffold NW_021011531.1 (2074302..2093737)

    NW_021011531.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114245240 Neighboring gene uncharacterized LOC114245255 Neighboring gene protein CutA homolog Neighboring gene calcium-activated potassium channel slo

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NW_021011531 Unplaced Scaffold Reference ASM398793v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables Toll binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables growth factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in central nervous system formation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in innate immune response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of Toll signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    protein spaetzle-like

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Bombyx mandarina Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM398793v1 Primary Assembly

    Genomic

    1. NW_021011531.1 Reference ASM398793v1 Primary Assembly

      Range
      2074302..2093737
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028177360.1 → XP_028033161.1  protein spaetzle-like

      UniProtKB/TrEMBL
      A0A6J2JTK4
      Related
      XP_028033161.1, XM_028177360.1
      Conserved Domains (1) summary
      pfam16077
      Location:179 → 271
      Spaetzle
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases