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    BSN bassoon presynaptic cytomatrix protein [ Macaca nemestrina (pig-tailed macaque) ]

    Gene ID: 105480446, updated on 13-Mar-2024

    Summary

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    Gene symbol
    BSN
    Gene description
    bassoon presynaptic cytomatrix protein
    See related
    Ensembl:ENSMNEG00000044956
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca nemestrina
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See BSN in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    101 current Mnem_1.0 (GCF_000956065.1) Unplaced Scaffold NW_012018354.1 (20352682..20489080)

    NW_012018354.1Genomic Context describing neighboring genes Neighboring gene nicolin 1, tubulin polyglutamylase complex subunit Neighboring gene aminomethyltransferase Neighboring gene dystroglycan 1 Neighboring gene ring finger protein 123 Neighboring gene acylaminoacyl-peptide hydrolase Neighboring gene macrophage stimulating 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_012018354 Unplaced Scaffold Reference Mnem_1.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables structural constituent of presynaptic active zone IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in presynaptic active zone assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein localization to synapse IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in GABA-ergic synapse IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in axon IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytoskeleton of presynaptic active zone IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in glutamatergic synapse IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein bassoon

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca nemestrina Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mnem_1.0

    Genomic

    1. NW_012018354.1 Reference Mnem_1.0

      Range
      20352682..20489080
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011739343.2 → XP_011737645.1  protein bassoon

      UniProtKB/TrEMBL
      A0A2K6E9G6
      Conserved Domains (6) summary
      cd15773
      Location:95 → 158
      FYVE1_BSN; FYVE-related domain 1 found in protein bassoon
      cl25549
      Location:2288 → 2356
      ARGLU; Arginine and glutamate-rich 1
      cl26247
      Location:126 → 279
      DNA_pol3_delta2; DNA polymerase III, delta subunit
      cl26386
      Location:3733 → 3854
      DNA_pol3_gamma3; DNA polymerase III subunits gamma and tau domain III
      cl26464
      Location:3415 → 3837
      Atrophin-1; Atrophin-1 family
      cl28890
      Location:392 → 456
      FYVE_like_SF; FYVE domain like superfamily

    2. XM_024792323.1 → XP_024648091.1  protein bassoon

      UniProtKB/TrEMBL
      A0A2K6E9G6
      Related
      ENSMNEP00000044799.1, ENSMNET00000069310.1
      Conserved Domains (6) summary
      cd15773
      Location:95 → 158
      FYVE1_BSN; FYVE-related domain 1 found in protein bassoon
      cl25549
      Location:2288 → 2356
      ARGLU; Arginine and glutamate-rich 1
      cl26247
      Location:126 → 279
      DNA_pol3_delta2; DNA polymerase III, delta subunit
      cl26386
      Location:3733 → 3854
      DNA_pol3_gamma3; DNA polymerase III subunits gamma and tau domain III
      cl26464
      Location:3415 → 3837
      Atrophin-1; Atrophin-1 family
      cl28890
      Location:392 → 456
      FYVE_like_SF; FYVE domain like superfamily
    Nucleotide Protein
    Heading Accession and Version

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