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    RLP21 receptor like protein 21 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 817085, updated on 18-Sep-2024

    Summary

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    Official Symbol
    RLP21
    Official Full Name
    receptor like protein 21
    Primary source
    TAIR:AT2G25470
    Locus tag
    AT2G25470
    See related
    Araport:AT2G25470
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AtRLP21; F13B15.13; F13B15_13; receptor like protein 21
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    Genomic context

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    See RLP21 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    7
    Sequence:
    Chromosome: 2; NC_003071.7 (10838294..10842016)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein Neighboring gene EEIG1/EHBP1 protein amino-terminal domain protein Neighboring gene TPX2 (targeting protein for Xklp2) protein family Neighboring gene prolamin-like protein (DUF784)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The leucine-rich repeat as a protein recognition motif. Kobe B, et al. Curr Opin Struct Biol, 2001 Dec. PMID 11751054
    2. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_128104.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within signal transduction IC
    Inferred by Curator
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    receptor like protein 21
    NP_180117.4
    • receptor like protein 21 (RLP21); INVOLVED IN: signal transduction; LOCATED IN: chloroplast; EXPRESSED IN: hypocotyl; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 14 (TAIR:AT1G74180.1); Has 123339 Blast hits to 32686 proteins in 1192 species: Archae - 50; Bacteria - 9219; Metazoa - 30627; Fungi - 1506; Plants - 72809; Viruses - 37; Other Eukaryotes - 9091 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      10838294..10842016
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001335998.1 → NP_001325074.1  receptor like protein 21 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B226

    2. NM_001335999.1 → NP_001325073.1  receptor like protein 21 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      A0A1P8B265, Q9SKK2
      UniProtKB/TrEMBL
      A0A5S9X137, A0A654EW44
      Conserved Domains (2) summary
      sd00033
      Location:582 → 603
      LRR_RI; leucine-rich repeat [structural motif]
      cl26793
      Location:377 → 903
      PLN00113; leucine-rich repeat receptor-like protein kinase; Provisional

    3. NM_128104.5 → NP_180117.4  receptor like protein 21 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_180117.4

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9X137, A0A654EW44, F4IRP9
      Conserved Domains (5) summary
      COG4886
      Location:245 → 498
      LRR; Leucine-rich repeat (LRR) protein [Transcription]
      cd00116
      Location:115 → 283
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
      sd00033
      Location:539 → 560
      LRR_RI; leucine-rich repeat [structural motif]
      pfam08263
      Location:17 → 61
      LRRNT_2; Leucine rich repeat N-terminal domain
      pfam13855
      Location:771 → 830
      LRR_8; Leucine rich repeat
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SKK2.2

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