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    LOC543703 blind [ Solanum lycopersicum (tomato) ]

    Gene ID: 543703, updated on 1-Nov-2024

    Summary

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    Gene symbol
    LOC543703
    Gene description
    blind
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Solanum lycopersicum
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Solanum subgen. Lycopersicon
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    Genomic context

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    See LOC543703 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_09 current SLM_r2.1 (GCF_036512215.1) 11 NC_090810.1 (59021662..59023407)
    103 previous assembly SL3.0 (GCF_000188115.4) 11 NC_015448.3 (53897656..53899398)

    Chromosome 11 - NC_090810.1Genomic Context describing neighboring genes Neighboring gene alpha-L-fucosidase 1 Neighboring gene putative late blight resistance protein homolog R1A-10 Neighboring gene glyoxalase-I Neighboring gene probable CoA ligase CCL7 Neighboring gene uncharacterized LOC112940243

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The tomato Blind gene encodes a MYB transcription factor that controls the formation of lateral meristems. Schmitz G, et al. Proc Natl Acad Sci U S A, 2002 Jan 22. PMID 11805344, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    blind

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001247714.2 → NP_001234643.1  blind

      See identical proteins and their annotated locations for NP_001234643.1

      Status: VALIDATED

      Source sequence(s)
      AEKE03003147, AF426174
      UniProtKB/TrEMBL
      Q8W1R8
      Conserved Domains (2) summary
      smart00717
      Location:14 → 64
      SANT; SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
      pfam00249
      Location:14 → 62
      Myb_DNA-binding; Myb-like DNA-binding domain

    RefSeqs of Annotated Genomes: GCF_036512215.1-RS_2024_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference SLM_r2.1 Primary Assembly

    Genomic

    1. NC_090810.1 Reference SLM_r2.1 Primary Assembly

      Range
      59021662..59023407
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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