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    CG17715 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 3355129, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG17715provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0041004
    Locus tag
    Dmel_CG17715
    See related
    AllianceGenome:FB:FBgn0041004
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    BcDNA:RE07178; BcDNA:RE63764; CG18603; Dmel\CG17715
    Summary
    Predicted to be active in mitochondrion. Is expressed in adult head. Orthologous to human TMEM65 (transmembrane protein 65). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG17715 in Genome Data Viewer
    Location:
    40F7-40F7; 2-54 cM
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (22844220..22854541)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (22736952..22747273)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR43266 Neighboring gene light Neighboring gene pseudo

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evolution of heterochromatic genes of Drosophila. Yasuhara JC, et al. Proc Natl Acad Sci U S A, 2005 Aug 2. PMID 16033869, Free PMC Article
    2. A circular RNA-gawky-chromatin regulatory axis modulates stress-induced transcription. Su R, et al. Nucleic Acids Res, 2024 Apr 24. PMID 38416578, Free PMC Article
    3. Genetic analysis of RpL38 and RpL5, two minute genes located in the centric heterochromatin of chromosome 2 of Drosophila melanogaster. Marygold SJ, et al. Genetics, 2005 Feb. PMID 15520262, Free PMC Article
    4. Cytogenetic and molecular characterization of heterochromatin gene models in Drosophila melanogaster. Rossi F, et al. Genetics, 2007 Feb. PMID 17110485, Free PMC Article
    5. The paradox of functional heterochromatin. Dimitri P, et al. Bioessays, 2005 Jan. PMID 15612038

    See all (28) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    • Annotated by Drosophila Heterochromatin Genome Project, Lawrence Berkeley National Lab, http://www.dhgp.org

    Gene Ontology Provided by FlyBase

    Component Evidence Code Pubs
    located_in mitochondrial inner membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    is_active_in mitochondrion IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG17715-PA
    CG17715-PB
    CG17715-PC
    CG17715-PD
    CG17715-PE
    CG17715-PF
    CG17715-PG
    CG17715-PH

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      22844220..22854541
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001259206.2 → NP_001246135.1  uncharacterized protein Dmel_CG17715, isoform G [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001246135.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      M9NDV5
      Conserved Domains (1) summary
      pfam10507
      Location:151 → 258
      DUF2453; Protein of unknown function (DUF2453)

    2. NM_001042945.3 → NP_001036410.1  uncharacterized protein Dmel_CG17715, isoform D [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001036410.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8SYF7
      Conserved Domains (1) summary
      pfam10507
      Location:151 → 258
      DUF2453; Protein of unknown function (DUF2453)

    3. NM_001042943.3 → NP_001036408.1  uncharacterized protein Dmel_CG17715, isoform F [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001036408.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q5LJR2
      Conserved Domains (1) summary
      pfam10507
      Location:110 → 217
      DUF2453; Protein of unknown function (DUF2453)

    4. NM_001042942.3 → NP_001036407.1  uncharacterized protein Dmel_CG17715, isoform E [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001036407.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q5LJR0

    5. NM_001042944.3 → NP_001036409.1  uncharacterized protein Dmel_CG17715, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001036409.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q5LJR0

    6. NM_001042946.3 → NP_001036411.1  uncharacterized protein Dmel_CG17715, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001036411.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8SYF7
      Conserved Domains (1) summary
      pfam10507
      Location:151 → 258
      DUF2453; Protein of unknown function (DUF2453)

    7. NM_001259207.2 → NP_001246136.1  uncharacterized protein Dmel_CG17715, isoform H [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001246136.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      M9NFF0
      Conserved Domains (1) summary
      pfam10507
      Location:147 → 252
      DUF2453; Protein of unknown function (DUF2453)

    8. NM_001042947.3 → NP_001036412.1  uncharacterized protein Dmel_CG17715, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001036412.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q5LJR2
      Conserved Domains (1) summary
      pfam10507
      Location:110 → 217
      DUF2453; Protein of unknown function (DUF2453)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    M9NDV5 M9NDV5
    M9NFF0 M9NFF0
    Q5LJR0 Q5LJR0
    Q5LJR2 Q5LJR2
    Q8SYF7 Q8SYF7

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