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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001033351.2 → NP_001028523.1 glutamate receptor ionotropic, NMDA 3A isoform 2 precursor
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) uses an alternate in-frame splice site in the 3' coding region, compared to variant 1. This results in a shorter protein (isoform 2), compared to isoform 1.
- Source sequence(s)
-
AK044171, AK138366, AL732521, AW494659
- Consensus CDS
-
CCDS51175.1
- UniProtKB/TrEMBL
-
A2AIR4
- Related
- ENSMUSP00000075970.4, ENSMUST00000076674.4
- Conserved Domains (3) summary
-
- cd06377
Location:30 → 497
- PBP1_iGluR_NMDA_NR3; N-terminal leucine/isoleucine/valine-binding protein (LIVBP)-like domain of the NR3 subunit of NMDA receptor family
- cd13720
Location:512 → 908
- PBP2_iGluR_NMDA_Nr3; The ligand-binding domain of the NR3 subunit of ionotropic NMDA (N-methyl-D-aspartate) glutamate receptors, a member of the type 2 periplasmic binding fold protein superfamily
- pfam00060
Location:676 → 942
- Lig_chan; Ligand-gated ion channel
-
NM_001276355.1 → NP_001263284.1 glutamate receptor ionotropic, NMDA 3A isoform 1 precursor
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1).
- Source sequence(s)
-
AK044171, AK138366, AL732521, AW494659, BQ180214
- Consensus CDS
-
CCDS71385.1
- UniProtKB/Swiss-Prot
- A2AIR4, A2AIR5, Q69Z52
- Related
- ENSMUSP00000091381.5, ENSMUST00000093859.11
- Conserved Domains (3) summary
-
- cd13720
Location:512 → 908
- PBP2_iGluR_NMDA_Nr3; The ligand-binding domain of the NR3 subunit of ionotropic NMDA (N-methyl-D-aspartate) glutamate receptors, a member of the type 2 periplasmic binding fold protein superfamily
- cd06377
Location:40 → 496
- PBP1_iGluR_NMDA_NR3; N-terminal leucine-isoleucine-valine-binding protein (LIVBP)-like domain of the NR3 subunit of NMDA receptor family
- pfam00060
Location:676 → 942
- Lig_chan; Ligand-gated ion channel
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000070.7 Reference GRCm39 C57BL/6J
- Range
-
49661611..49846023 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_006537913.4 → XP_006537976.1 glutamate receptor ionotropic, NMDA 3A isoform X1
- Conserved Domains (3) summary
-
- cd13720
Location:512 → 908
- PBP2_iGluR_NMDA_Nr3; The ligand-binding domain of the NR3 subunit of ionotropic NMDA (N-methyl-D-aspartate) glutamate receptors, a member of the type 2 periplasmic binding fold protein superfamily
- pfam00060
Location:676 → 942
- Lig_chan; Ligand-gated ion channel
- cd06377
Location:40 → 496
- PBP1_iGluR_NMDA_NR3; N-terminal leucine-isoleucine-valine-binding protein (LIVBP)-like domain of the NR3 subunit of NMDA receptor family
-
XM_006537914.4 → XP_006537977.1 glutamate receptor ionotropic, NMDA 3A isoform X2
- Conserved Domains (2) summary
-
- cd13720
Location:512 → 908
- PBP2_iGluR_NMDA_Nr3; The ligand-binding domain of the NR3 subunit of ionotropic NMDA (N-methyl-D-aspartate) glutamate receptors, a member of the type 2 periplasmic binding fold protein superfamily
- cd06377
Location:40 → 496
- PBP1_iGluR_NMDA_NR3; N-terminal leucine-isoleucine-valine-binding protein (LIVBP)-like domain of the NR3 subunit of NMDA receptor family