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    BRDT bromodomain testis associated [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 711998, updated on 17-Aug-2024

    Summary

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    Official Symbol
    BRDTprovided by VGNC
    Official Full Name
    bromodomain testis associatedprovided by VGNC
    Primary source
    VGNC:VGNC:70282
    See related
    Ensembl:ENSMMUG00000014018
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See BRDT in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    22
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (132168129..132232259, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (92574017..92643494)

    Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene lysophosphatidylcholine acyltransferase 2b, pseudogene Neighboring gene epoxide hydrolase 4 Neighboring gene uncharacterized LOC114678196 Neighboring gene transforming growth factor beta receptor 3 Neighboring gene U2 spliceosomal RNA

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables lysine-acetylated histone binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in chromatin remodeling IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of transcription elongation by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of chromatin IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    bromodomain testis-specific protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041754.1 Reference Mmul_10 Primary Assembly

      Range
      132168129..132232259 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015144774.2 → XP_015000260.2  bromodomain testis-specific protein isoform X1

      UniProtKB/TrEMBL
      A0A1D5Q1K8, F7AWF3, G7MHW3
      Related
      ENSMMUP00000018423.4, ENSMMUT00000019675.4
      Conserved Domains (4) summary
      cd05497
      Location:27 → 133
      Bromo_Brdt_I_like; Bromodomain, Brdt_like subfamily, repeat I. Human Brdt is a testis-specific member of the BET subfamily of bromodomain proteins; the first bromodomain in Brdt has been shown to be essential for male germ cell differentiation. Bromodomains are 110 amino ...
      cd05498
      Location:272 → 373
      Bromo_Brdt_II_like; Bromodomain, Brdt_like subfamily, repeat II. Human Brdt is a testis-specific member of the BET subfamily of bromodomain proteins; the first bromodomain in Brdt has been shown to be essential for male germ cell differentiation. Bromodomains are 110 amino ...
      pfam17105
      Location:905 → 947
      BRD4_CDT; C-terminal domain of bromodomain protein 4
      pfam17035
      Location:509 → 571
      BET; Bromodomain extra-terminal - transcription regulation

    2. XM_015144738.2 → XP_015000224.2  bromodomain testis-specific protein isoform X1

      UniProtKB/TrEMBL
      A0A1D5Q1K8, F7AWF3, G7MHW3
      Conserved Domains (4) summary
      cd05497
      Location:27 → 133
      Bromo_Brdt_I_like; Bromodomain, Brdt_like subfamily, repeat I. Human Brdt is a testis-specific member of the BET subfamily of bromodomain proteins; the first bromodomain in Brdt has been shown to be essential for male germ cell differentiation. Bromodomains are 110 amino ...
      cd05498
      Location:272 → 373
      Bromo_Brdt_II_like; Bromodomain, Brdt_like subfamily, repeat II. Human Brdt is a testis-specific member of the BET subfamily of bromodomain proteins; the first bromodomain in Brdt has been shown to be essential for male germ cell differentiation. Bromodomains are 110 amino ...
      pfam17105
      Location:905 → 947
      BRD4_CDT; C-terminal domain of bromodomain protein 4
      pfam17035
      Location:509 → 571
      BET; Bromodomain extra-terminal - transcription regulation

    3. XM_015144730.2 → XP_015000216.2  bromodomain testis-specific protein isoform X1

      UniProtKB/TrEMBL
      A0A1D5Q1K8, F7AWF3, G7MHW3
      Conserved Domains (4) summary
      cd05497
      Location:27 → 133
      Bromo_Brdt_I_like; Bromodomain, Brdt_like subfamily, repeat I. Human Brdt is a testis-specific member of the BET subfamily of bromodomain proteins; the first bromodomain in Brdt has been shown to be essential for male germ cell differentiation. Bromodomains are 110 amino ...
      cd05498
      Location:272 → 373
      Bromo_Brdt_II_like; Bromodomain, Brdt_like subfamily, repeat II. Human Brdt is a testis-specific member of the BET subfamily of bromodomain proteins; the first bromodomain in Brdt has been shown to be essential for male germ cell differentiation. Bromodomains are 110 amino ...
      pfam17105
      Location:905 → 947
      BRD4_CDT; C-terminal domain of bromodomain protein 4
      pfam17035
      Location:509 → 571
      BET; Bromodomain extra-terminal - transcription regulation

    4. XM_015144742.2 → XP_015000228.2  bromodomain testis-specific protein isoform X1

      UniProtKB/TrEMBL
      A0A1D5Q1K8, F7AWF3, G7MHW3
      Related
      ENSMMUP00000041920.2, ENSMMUT00000076393.2
      Conserved Domains (4) summary
      cd05497
      Location:27 → 133
      Bromo_Brdt_I_like; Bromodomain, Brdt_like subfamily, repeat I. Human Brdt is a testis-specific member of the BET subfamily of bromodomain proteins; the first bromodomain in Brdt has been shown to be essential for male germ cell differentiation. Bromodomains are 110 amino ...
      cd05498
      Location:272 → 373
      Bromo_Brdt_II_like; Bromodomain, Brdt_like subfamily, repeat II. Human Brdt is a testis-specific member of the BET subfamily of bromodomain proteins; the first bromodomain in Brdt has been shown to be essential for male germ cell differentiation. Bromodomains are 110 amino ...
      pfam17105
      Location:905 → 947
      BRD4_CDT; C-terminal domain of bromodomain protein 4
      pfam17035
      Location:509 → 571
      BET; Bromodomain extra-terminal - transcription regulation

    5. XM_015144751.2 → XP_015000237.2  bromodomain testis-specific protein isoform X1

      UniProtKB/TrEMBL
      A0A1D5Q1K8, F7AWF3, G7MHW3
      Conserved Domains (4) summary
      cd05497
      Location:27 → 133
      Bromo_Brdt_I_like; Bromodomain, Brdt_like subfamily, repeat I. Human Brdt is a testis-specific member of the BET subfamily of bromodomain proteins; the first bromodomain in Brdt has been shown to be essential for male germ cell differentiation. Bromodomains are 110 amino ...
      cd05498
      Location:272 → 373
      Bromo_Brdt_II_like; Bromodomain, Brdt_like subfamily, repeat II. Human Brdt is a testis-specific member of the BET subfamily of bromodomain proteins; the first bromodomain in Brdt has been shown to be essential for male germ cell differentiation. Bromodomains are 110 amino ...
      pfam17105
      Location:905 → 947
      BRD4_CDT; C-terminal domain of bromodomain protein 4
      pfam17035
      Location:509 → 571
      BET; Bromodomain extra-terminal - transcription regulation

    6. XM_015144758.2 → XP_015000244.2  bromodomain testis-specific protein isoform X1

      UniProtKB/TrEMBL
      A0A1D5Q1K8, F7AWF3, G7MHW3
      Conserved Domains (4) summary
      cd05497
      Location:27 → 133
      Bromo_Brdt_I_like; Bromodomain, Brdt_like subfamily, repeat I. Human Brdt is a testis-specific member of the BET subfamily of bromodomain proteins; the first bromodomain in Brdt has been shown to be essential for male germ cell differentiation. Bromodomains are 110 amino ...
      cd05498
      Location:272 → 373
      Bromo_Brdt_II_like; Bromodomain, Brdt_like subfamily, repeat II. Human Brdt is a testis-specific member of the BET subfamily of bromodomain proteins; the first bromodomain in Brdt has been shown to be essential for male germ cell differentiation. Bromodomains are 110 amino ...
      pfam17105
      Location:905 → 947
      BRD4_CDT; C-terminal domain of bromodomain protein 4
      pfam17035
      Location:509 → 571
      BET; Bromodomain extra-terminal - transcription regulation

    7. XM_015144771.2 → XP_015000257.2  bromodomain testis-specific protein isoform X2

      UniProtKB/TrEMBL
      G7MHW3
      Conserved Domains (4) summary
      cd05497
      Location:27 → 133
      Bromo_Brdt_I_like; Bromodomain, Brdt_like subfamily, repeat I. Human Brdt is a testis-specific member of the BET subfamily of bromodomain proteins; the first bromodomain in Brdt has been shown to be essential for male germ cell differentiation. Bromodomains are 110 amino ...
      smart00297
      Location:223 → 279
      BROMO; bromo domain
      pfam17105
      Location:808 → 850
      BRD4_CDT; C-terminal domain of bromodomain protein 4
      pfam17035
      Location:412 → 474
      BET; Bromodomain extra-terminal - transcription regulation

    8. XM_015144744.2 → XP_015000230.2  bromodomain testis-specific protein isoform X1

      UniProtKB/TrEMBL
      A0A1D5Q1K8, F7AWF3, G7MHW3
      Conserved Domains (4) summary
      cd05497
      Location:27 → 133
      Bromo_Brdt_I_like; Bromodomain, Brdt_like subfamily, repeat I. Human Brdt is a testis-specific member of the BET subfamily of bromodomain proteins; the first bromodomain in Brdt has been shown to be essential for male germ cell differentiation. Bromodomains are 110 amino ...
      cd05498
      Location:272 → 373
      Bromo_Brdt_II_like; Bromodomain, Brdt_like subfamily, repeat II. Human Brdt is a testis-specific member of the BET subfamily of bromodomain proteins; the first bromodomain in Brdt has been shown to be essential for male germ cell differentiation. Bromodomains are 110 amino ...
      pfam17105
      Location:905 → 947
      BRD4_CDT; C-terminal domain of bromodomain protein 4
      pfam17035
      Location:509 → 571
      BET; Bromodomain extra-terminal - transcription regulation
    Nucleotide Protein
    Heading Accession and Version

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