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    PDCD1LG2 programmed cell death 1 ligand 2 [ Sagmatias obliquidens (Pacific white-sided dolphin) ]

    Gene ID: 113620109, updated on 7-Jan-2025

    Summary

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    Gene symbol
    PDCD1LG2
    Gene description
    programmed cell death 1 ligand 2
    See related
    EnsemblRapid:ENSLOBG00000005204
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Sagmatias obliquidens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Sagmatias
    Orthologs
    human mouse all
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    Genomic context

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    See PDCD1LG2 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    100 current ASM367639v1 (GCF_003676395.1) Unplaced Scaffold NW_020837951.1 (55421210..55513409)

    NW_020837951.1Genomic Context describing neighboring genes Neighboring gene plasminogen receptor with a C-terminal lysine Neighboring gene CD274 molecule Neighboring gene thyroid transcription factor 1-associated protein 26-like Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC113620112 Neighboring gene uncharacterized LOC113620111 Neighboring gene U6 spliceosomal RNA Neighboring gene transfer RNA glycine (anticodon CCC) Neighboring gene RIC1 homolog, RAB6A GEF complex partner 1 Neighboring gene endoplasmic reticulum metallopeptidase 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_020837951 Unplaced Scaffold Reference ASM367639v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by GO

    Process Evidence Code Pubs
    involved_in T cell costimulation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cell surface receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cellular response to lipopolysaccharide IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in immune response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of T cell proliferation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of T cell proliferation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in external side of plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    programmed cell death 1 ligand 2

    NCBI Reference Sequences (RefSeq)

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    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Lagenorhynchus obliquidens Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM367639v1 Primary Assembly

    Genomic

    1. NW_020837951.1 Reference ASM367639v1 Primary Assembly

      Range
      55421210..55513409
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_027105827.1 → XP_026961628.1  programmed cell death 1 ligand 2 isoform X2

      Conserved Domains (2) summary
      smart00410
      Location:30 → 119
      IG_like; Immunoglobulin like
      cl11960
      Location:135 → 201
      Ig; Immunoglobulin domain

    2. XM_027105826.1 → XP_026961627.1  programmed cell death 1 ligand 2 isoform X1

      Conserved Domains (2) summary
      smart00410
      Location:30 → 119
      IG_like; Immunoglobulin like
      cl11960
      Location:135 → 201
      Ig; Immunoglobulin domain

    3. XM_027105828.1 → XP_026961629.1  programmed cell death 1 ligand 2 isoform X3

      Conserved Domains (2) summary
      smart00410
      Location:30 → 119
      IG_like; Immunoglobulin like
      cl11960
      Location:135 → 201
      Ig; Immunoglobulin domain

    4. XM_027105829.1 → XP_026961630.1  programmed cell death 1 ligand 2 isoform X4

      Conserved Domains (2) summary
      smart00410
      Location:30 → 119
      IG_like; Immunoglobulin like
      cl11960
      Location:135 → 201
      Ig; Immunoglobulin domain

    5. XM_027105830.1 → XP_026961631.1  programmed cell death 1 ligand 2 isoform X5

      Related
      ENSLOBP00000006911.1, ENSLOBT00000007634.1
      Conserved Domains (2) summary
      smart00410
      Location:30 → 119
      IG_like; Immunoglobulin like
      cl11960
      Location:135 → 201
      Ig; Immunoglobulin domain
    Nucleotide Protein
    Heading Accession and Version

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