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    cytochrome c oxidase-like protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 829939, updated on 18-Sep-2024

    Summary

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    Official Full Name
    cytochrome c oxidase-like protein
    Primary source
    TAIR:AT4G37830
    Locus tag
    AT4G37830
    See related
    Araport:AT4G37830
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    4
    Sequence:
    Chromosome: 4; NC_003075.7 (17787524..17788834, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene EPIDERMAL PATTERNING FACTOR-like protein Neighboring gene uncharacterized protein Neighboring gene miscRNA Neighboring gene hexokinase-like 3

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The role of a disulfide bridge in the stability and folding kinetics of Arabidopsis thaliana cytochrome c(6A). Mason JM, et al. Biochim Biophys Acta, 2012 Feb. PMID 22085909
    2. Experimental analysis of the Arabidopsis mitochondrial proteome highlights signaling and regulatory components, provides assessment of targeting prediction programs, and indicates plant-specific mitochondrial proteins. Heazlewood JL, et al. Plant Cell, 2004 Jan. PMID 14671022, Free PMC Article
    3. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Markers

    NM_001085041.2
    NM_001342457.1
    NM_119944.4

    Gene Ontology Provided by TAIR

    Component Evidence Code Pubs
    located_in mitochondrion HDA PubMed 
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  
    part_of respiratory chain complex IV IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    cytochrome c oxidase-like protein
    NP_001078510.1
    • cytochrome c oxidase-related; FUNCTIONS IN: cytochrome-c oxidase activity; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome c oxidase, subunit VIa (InterPro:IPR001349); Has 37 Blast hits to 37 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    NP_195496.1
    • cytochrome c oxidase-related; FUNCTIONS IN: cytochrome-c oxidase activity; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome c oxidase, subunit VIa (InterPro:IPR001349); Has 184 Blast hits to 184 proteins in 52 species: Archae - 0; Bacteria - 0; Metazoa - 127; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      17787524..17788834 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_119944.4 → NP_195496.1  cytochrome c oxidase-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_195496.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8L974, Q9T070
      UniProtKB/TrEMBL
      A0A178V2F3, A0A654FWG7
      Conserved Domains (1) summary
      PLN02595
      Location:1 → 102
      PLN02595; cytochrome c oxidase subunit VI protein

    2. NM_001085041.2 → NP_001078510.1  cytochrome c oxidase-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001078510.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V2F3, F4JSU5
      Conserved Domains (1) summary
      PLN02595
      Location:1 → 92
      PLN02595; cytochrome c oxidase subunit VI protein

    3. NM_001342457.1 → NP_001329576.1  cytochrome c oxidase-like protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B847
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9T070.1

    Gene LinkOut

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