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    ACT-like superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 832604, updated on 18-Sep-2024

    Summary

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    Official Full Name
    ACT-like superfamily protein
    Primary source
    TAIR:AT5G25320
    Locus tag
    AT5G25320
    See related
    Araport:AT5G25320
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F18G18.60; F18G18_60
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    7
    Sequence:
    Chromosome: 5; NC_003076.8 (8787196..8789846, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene F-box protein Neighboring gene pseudo Neighboring gene Exostosin family protein Neighboring gene Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein Neighboring gene Ubiquitin-like superfamily protein Neighboring gene EIN3-binding F box protein 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    ACT-like superfamily protein
    NP_197914.1
    • ACT-like superfamily protein; FUNCTIONS IN: amino acid binding; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Amino acid-binding ACT (InterPro:IPR002912); BEST Arabidopsis thaliana protein match is: ACT domain repeat 3 (TAIR:AT1G76990.5); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      8787196..8789846 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001343917.1 → NP_001330097.1  ACT-like superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B9Q4

    2. NM_122441.2 → NP_197914.1  ACT-like superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_197914.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4JWR0
      UniProtKB/TrEMBL
      A0A5S9Y725
      Conserved Domains (4) summary
      cd04895
      Location:37 → 108
      ACT_ACR_1; ACT domain-containing protein which is composed almost entirely of four ACT domain repeats (the "ACR" protein)
      cd04897
      Location:296 → 370
      ACT_ACR_3; ACT domain-containing protein which is composed almost entirely of four ACT domain repeats (the "ACR" protein)
      cd04925
      Location:135 → 208
      ACT_ACR_2; ACT domain-containing protein which is composed almost entirely of four ACT domain repeats (the "ACR" protein)
      cd04926
      Location:374 → 445
      ACT_ACR_4; C-terminal ACT domain, of a novel type of ACT domain-containing protein which is composed almost entirely of four ACT domain repeats (the "ACR" protein)

    3. NM_001343918.1 → NP_001330098.1  ACT-like superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B9R3, A0A5S9Y725
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    F4JWR0.1

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