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    gcn-1 TOG domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 190051, updated on 9-Dec-2024

    Summary

    Official Symbol
    gcn-1
    Official Full Name
    TOG domain-containing protein
    Primary source
    WormBase:WBGene00021697
    Locus tag
    CELE_Y48G9A.3
    See related
    AllianceGenome:WB:WBGene00021697
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable protein kinase regulator activity. Involved in positive regulation of peptidyl-serine phosphorylation; regulation of apoptotic process; and regulation of translation. Acts upstream of with a positive effect on positive regulation of gene expression. Acts upstream of or within with a negative effect on negative regulation of translation. Predicted to be located in cytosolic ribosome. Predicted to be active in cytosol. Is expressed in several structures, including body wall musculature; head neurons; hermaphrodite gonad; intestinal cell; and pharyngeal neurons. Orthologous to human GCN1 (GCN1 activator of EIF2AK4). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

    See gcn-1 in Genome Data Viewer
    Location:
    chromosome: III
    Exon count:
    28
    Sequence:
    Chromosome: III; NC_003281.10 (2151945..2197908)

    Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene Conserved secreted protein Neighboring gene GBD/FH3 domain-containing protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial Neighboring gene ncRNA Neighboring gene Cystatin domain-containing protein

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables protein kinase regulator activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    is_active_in cytosol IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in cytosol ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    located_in cytosolic ribosome ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 

    General protein information

    Preferred Names
    TOG domain-containing protein
    NP_001367648.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003281.10 Reference assembly

      Range
      2151945..2197908
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001381763.1NP_001367648.1  TOG domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      B3CJ34
      Conserved Domains (2) summary
      COG5181
      Location:19342054
      HSH155; U2 snRNP spliceosome subunit [RNA processing and modification]
      sd00044
      Location:14301456
      HEAT; HEAT repeat [structural motif]