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    VC5.2 Laminin EGF-like domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 179097, updated on 18-Sep-2024

    Summary

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    Official Symbol
    VC5.2
    Official Full Name
    Laminin EGF-like domain-containing protein
    Primary source
    WormBase:WBGene00020908
    Locus tag
    CELE_VC5.2
    See related
    AllianceGenome:WB:WBGene00020908
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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    Genomic context

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    See VC5.2 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    7
    Sequence:
    Chromosome: V; NC_003283.11 (7085956..7088854)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Polyprotein allergen nematode domain-containing protein Neighboring gene Histone acetyltransferase Tip60 homolog Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Nuclear Hormone Receptor family Neighboring gene Nuclear Hormone Receptor family

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    Laminin EGF-like domain-containing protein
    NP_504797.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      7085956..7088854
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_072396.7 → NP_504797.1  Laminin EGF-like domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_504797.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9TYU4
      Conserved Domains (2) summary
      cd00055
      Location:487 → 531
      EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
      pfam16469
      Location:310 → 429
      NPA; Nematode polyprotein allergen ABA-1
    Nucleotide Protein
    Heading Accession and Version

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