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    C53A5.9 Kelch repeat protein [ Caenorhabditis elegans ]

    Gene ID: 183739, updated on 9-Dec-2024

    Summary

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    Official Symbol
    C53A5.9
    Official Full Name
    Kelch repeat protein
    Primary source
    WormBase:WBGene00008267
    Locus tag
    CELE_C53A5.9
    See related
    AllianceGenome:WB:WBGene00008267
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable ubiquitin-like ligase-substrate adaptor activity. Predicted to be involved in proteasome-mediated ubiquitin-dependent protein catabolic process. Predicted to be part of Cul3-RING ubiquitin ligase complex. Predicted to be active in cytoplasm. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See C53A5.9 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    5
    Sequence:
    Chromosome: V; NC_003283.11 (14556966..14558857, complement)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Fibronectin type-III domain-containing protein Neighboring gene Serpentine receptor class gamma-47 Neighboring gene Serpentine Receptor, class T Neighboring gene Kelch-like protein 10

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables ubiquitin-like ligase-substrate adaptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    part_of Cul3-RING ubiquitin ligase complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    Kelch repeat protein
    NP_506605.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      14556966..14558857 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_074204.5 → NP_506605.2  Kelch repeat protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_506605.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      O17700
      Conserved Domains (3) summary
      smart00612
      Location:249 → 293
      Kelch; Kelch domain
      sd00038
      Location:237 → 279
      Kelch; KELCH repeat [structural motif]
      pfam01344
      Location:377 → 423
      Kelch_1; Kelch motif
    Nucleotide Protein
    Heading Accession and Version

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