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    CD6 CD6 molecule [ Bos taurus (domestic cattle) ]

    Gene ID: 282881, updated on 30-Jan-2025

    Summary

    Official Symbol
    CD6provided by VGNC
    Official Full Name
    CD6 moleculeprovided by VGNC
    Primary source
    VGNC:VGNC:27041
    See related
    BGD:BT18907; EnsemblRapid:ENSBTAG00070034886
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
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    Genomic context

    See CD6 in Genome Data Viewer
    Location:
    chromosome: 29
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 29 NC_037356.1 (37311466..37357287)

    Chromosome 29 - NC_037356.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 132A Neighboring gene solute carrier family 15 member 3 Neighboring gene uncharacterized LOC112444913 Neighboring gene CD5 molecule

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_037356.1 Chromosome 29 Reference ARS-UCD2.0 Primary Assembly

    Expression

    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    General gene information

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in extracellular space PubMed 
    located_in plasma membrane PubMed 

    General protein information

    Preferred Names
    T-cell differentiation antigen CD6
    Names
    CD6 antigen

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037356.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      37311466..37357287
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005226875.5XP_005226932.1  T-cell differentiation antigen CD6 isoform X5

      UniProtKB/TrEMBL
      A0A3Q1M536
      Related
      ENSBTAP00070047765.1, ENSBTAT00070078360.1
      Conserved Domains (2) summary
      smart00202
      Location:165264
      SR; Scavenger receptor Cys-rich
      pfam00530
      Location:170264
      SRCR; Scavenger receptor cysteine-rich domain
    2. XM_005226873.5XP_005226930.1  T-cell differentiation antigen CD6 isoform X1

      UniProtKB/TrEMBL
      A0A3Q1M536
      Conserved Domains (2) summary
      smart00202
      Location:165264
      SR; Scavenger receptor Cys-rich
      pfam00530
      Location:170264
      SRCR; Scavenger receptor cysteine-rich domain
    3. XM_005226874.5XP_005226931.1  T-cell differentiation antigen CD6 isoform X2

      UniProtKB/TrEMBL
      A0A3Q1M536
      Conserved Domains (2) summary
      smart00202
      Location:165264
      SR; Scavenger receptor Cys-rich
      pfam00530
      Location:170264
      SRCR; Scavenger receptor cysteine-rich domain
    4. XM_005226876.5XP_005226933.1  T-cell differentiation antigen CD6 isoform X6

      UniProtKB/TrEMBL
      A0A3Q1M536
      Conserved Domains (2) summary
      smart00202
      Location:165264
      SR; Scavenger receptor Cys-rich
      pfam00530
      Location:170264
      SRCR; Scavenger receptor cysteine-rich domain
    5. XM_002699258.6XP_002699304.2  T-cell differentiation antigen CD6 isoform X3

      UniProtKB/TrEMBL
      A0A3Q1M536, A0A3Q1MDQ0
      Related
      ENSBTAP00070047752.1, ENSBTAT00070078336.1
      Conserved Domains (2) summary
      smart00202
      Location:165264
      SR; Scavenger receptor Cys-rich
      pfam00530
      Location:170264
      SRCR; Scavenger receptor cysteine-rich domain
    6. XM_010820988.4XP_010819290.1  T-cell differentiation antigen CD6 isoform X4

      UniProtKB/TrEMBL
      A0A3Q1M536
      Conserved Domains (2) summary
      smart00202
      Location:165264
      SR; Scavenger receptor Cys-rich
      pfam00530
      Location:170264
      SRCR; Scavenger receptor cysteine-rich domain
    7. XM_024987592.2XP_024843360.1  T-cell differentiation antigen CD6 isoform X7

      UniProtKB/TrEMBL
      A0A3Q1M536, A0A3Q1MEX7
      Conserved Domains (1) summary
      smart00202
      Location:165264
      SR; Scavenger receptor Cys-rich
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