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    hypothetical protein (DUF674) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 820068, updated on 18-Sep-2024

    Summary

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    Official Full Name
    hypothetical protein (DUF674)
    Primary source
    TAIR:AT3G09140
    Locus tag
    AT3G09140
    See related
    Araport:AT3G09140
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    3
    Sequence:
    Chromosome: 3; NC_003074.8 (2800853..2802795, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene hypothetical protein (DUF674) Neighboring gene uncharacterized protein Neighboring gene phytochromobilin:ferredoxin oxidoreductase, chloroplast / phytochromobilin synthase (HY2) Neighboring gene RNA-binding (RRM/RBD/RNP motifs) family protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001125131.1
    NM_111749.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    hypothetical protein (DUF674)
    NP_001118603.1
    • Protein of unknown function (DUF674); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF674 (InterPro:IPR007750); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF674) (TAIR:AT5G01150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    NP_187526.2
    • Protein of unknown function (DUF674); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF674 (InterPro:IPR007750); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF674) (TAIR:AT5G01150.1); Has 424 Blast hits to 257 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 422; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      2800853..2802795 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001125131.1 → NP_001118603.1  hypothetical protein (DUF674) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001118603.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9XBI7, A0A654FFZ6, F4IYN1
      Conserved Domains (1) summary
      pfam05056
      Location:7 → 468
      DUF674; Protein of unknown function (DUF674)

    2. NM_111749.2 → NP_187526.2  hypothetical protein (DUF674) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_187526.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VE33, Q6DYD0
      Conserved Domains (1) summary
      pfam05056
      Location:6 → 496
      DUF674; Protein of unknown function (DUF674)
    Nucleotide Protein
    Heading Accession and Version

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