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hypothetical protein (DUF674) [Arabidopsis thaliana]

NCBI Reference Sequence: NP_187526.2

Identical Proteins FASTA Graphics 

LOCUS       NP_187526                530 aa            linear   PLN 20-OCT-2022
DEFINITION  hypothetical protein (DUF674) [Arabidopsis thaliana].
ACCESSION   NP_187526
VERSION     NP_187526.2
DBLINK      BioProject: PRJNA116
            BioSample: SAMN03081427
DBSOURCE    REFSEQ: accession NM_111749.2
KEYWORDS    RefSeq.
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (residues 1 to 530)
  AUTHORS   Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
            Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
            Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
            Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
            Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
            Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
            Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
            Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
            Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
            Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
            Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
            Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
            Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
            Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
            Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
            Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
            Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
            Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
            Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
            Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
            Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
            Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
            Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
            Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
            Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
            Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
            Yamada,M., Yasuda,M. and Tabata,S.
  CONSRTM   European Union Chromosome 3 Arabidopsis Sequencing Consortium;
            Institute for Genomic Research; Kazusa DNA Research Institute
  TITLE     Sequence and analysis of chromosome 3 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 408 (6814), 820-822 (2000)
   PUBMED   11130713
REFERENCE   2  (residues 1 to 530)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-OCT-2022) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (residues 1 to 530)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
REFERENCE   4  (residues 1 to 530)
  AUTHORS   Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
  CONSRTM   TAIR
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
            Institution, 260 Panama Street, Stanford, CA, USA
COMMENT     REVIEWED REFSEQ: This record has been curated by TAIR and Araport.
            The reference sequence is identical to AEE74727.
            
            On Nov 3, 2005 this sequence version replaced NP_187526.1.
            Method: conceptual translation.
FEATURES             Location/Qualifiers
     source          1..530
                     /organism="Arabidopsis thaliana"
                     /db_xref="taxon:3702"
                     /chromosome="3"
                     /ecotype="Columbia"
     Protein         1..530
                     /product="hypothetical protein (DUF674)"
                     /calculated_mol_wt=59599
     Region          7..496
                     /region_name="DUF674"
                     /note="Protein of unknown function (DUF674); pfam05056"
                     /db_xref="CDD:461537"
     CDS             1..530
                     /locus_tag="AT3G09140"
                     /coded_by="NM_111749.2:23..1615"
                     /inference="Similar to RNA sequence,
                     EST:INSD:EG431037.1,INSD:EG431038.1,INSD:EG442137.1,
                     INSD:EG430157.1,INSD:EG431031.1,INSD:EG442788.1,
                     INSD:EG431050.1,INSD:EG431032.1,INSD:EG431045.1,
                     INSD:EG431049.1,INSD:EG431034.1,INSD:EG430170.1,
                     INSD:EG431046.1,INSD:EG430169.1,INSD:EG431047.1,
                     INSD:EG442136.1,INSD:EG431051.1,INSD:EG431053.1,
                     INSD:EG431054.1,INSD:EG430175.1,INSD:EG431042.1,
                     INSD:EG431048.1,INSD:EG431033.1,INSD:EG431036.1,
                     INSD:EG431035.1,INSD:EG442146.1,INSD:EG430176.1,
                     INSD:EG431044.1,INSD:EG431043.1"
                     /inference="Similar to RNA sequence, mRNA:INSD:AY630775.1"
                     /note="Protein of unknown function (DUF674); CONTAINS
                     InterPro DOMAIN/s: Protein of unknown function DUF674
                     (InterPro:IPR007750); BEST Arabidopsis thaliana protein
                     match is: Protein of unknown function (DUF674)
                     (TAIR:AT5G01150.1); Has 424 Blast hits to 257 proteins in
                     14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
                     2; Plants - 422; Viruses - 0; Other Eukaryotes - 0
                     (source: NCBI BLink)."
                     /db_xref="GeneID:820068"
                     /db_xref="TAIR:AT3G09140"
                     /db_xref="Araport:AT3G09140"
ORIGIN      
        1 maestkskkl svrllidelk nkvvlaesgk dfvdvlfsfl alpmgtivrl lekhqkspqv
       61 gigcfnnlyk svsemdlesf qteackqvll yprsvnlekf rnmklkiddt ravkyfvcsg
      121 fkescrhhys isnteececg eivdskvvkr vmnreikgle eeqvqgrilr kdndgvffsc
      181 kassfiitdd lkveassmdn vlntlrglgy adtsklseil lhvgvsevff tvssyvglrs
      241 lniyvllsvc lchqqvltll ecfftsdlpl tdtflkkqss lqmirsripl sptlqgsgdg
      301 avpgqtitfk afvrkpniki lcvecgadfi dllftflalp lesvwnisag nislgcignl
      361 frsfkridas sssktklpsf yscpkqlldv vteqqeiycs fkcvvetnne ydfkftrkmp
      421 prpnslkekn qnmfftnkts vlyltsfgfm kqntrflvtd dlvikpknlv snisllklnm
      481 hldkedveeh vitigkleai sllraslmts saltssfwsl iskkakaetq
//
Feature
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Protein clusters for NP_187526.2

Reference sequence information

  • RefSeq mRNA
    See reference mRNA sequence for the AT3G09140 gene (NM_111749.2).
  • RefSeq protein isoforms
    See the other reference sequence protein isoform for the AT3G09140 gene (NP_001118603.1).

More about the AT3G09140 gene

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