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    CG18480 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 34920, updated on 24-Oct-2024

    Summary

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    Official Symbol
    CG18480provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0028518
    Locus tag
    Dmel_CG18480
    See related
    AllianceGenome:FB:FBgn0028518
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    BcDNA:LP11031; BG:DS07108.4; CT42128; Dmel\CG18480
    Orthologs
    all
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    Genomic context

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    See CG18480 in Genome Data Viewer
    Location:
    35D3-35D3; 2-51 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (15630002..15634987)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (15630002..15634987)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene Odorant receptor 35a Neighboring gene uncharacterized protein Neighboring gene stolid Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Larval density can be used to predict genetic modifiers of glucagon signaling in Drosophila melanogaster. Nicol A, et al. PLoS One, 2024. PMID 39196987, Free PMC Article
    2. GATA factors participate in tissue-specific immune responses in Drosophila larvae. Senger K, et al. Proc Natl Acad Sci U S A, 2006 Oct 24. PMID 17032752, Free PMC Article
    3. Gene expression profiling of brakeless mutant Drosophila embryos. Crona F, et al. Data Brief, 2015 Dec. PMID 26509186, Free PMC Article
    4. Genome features of "Dark-fly", a Drosophila line reared long-term in a dark environment. Izutsu M, et al. PLoS One, 2012. PMID 22432011, Free PMC Article
    5. An exploration of the sequence of a 2.9-Mb region of the genome of Drosophila melanogaster: the Adh region. Ashburner M, et al. Genetics, 1999 Sep. PMID 10471707, Free PMC Article

    See all (28) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG18480-PA
    CG18480-PB
    CG18480-PC

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      15630002..15634987
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001299031.1 → NP_001285960.1  uncharacterized protein Dmel_CG18480, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001285960.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VJN8
      Conserved Domains (3) summary
      cd00116
      Location:76 → 230
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
      sd00033
      Location:76 → 99
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:74 → 134
      LRR_8; Leucine rich repeat

    2. NM_001299032.1 → NP_001285961.1  uncharacterized protein Dmel_CG18480, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001285961.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VJN8
      Conserved Domains (3) summary
      cd00116
      Location:76 → 230
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
      sd00033
      Location:76 → 99
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:74 → 134
      LRR_8; Leucine rich repeat

    3. NM_135917.4 → NP_609761.1  uncharacterized protein Dmel_CG18480, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_609761.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VJN8
      Related
      FBpp0080314
      Conserved Domains (3) summary
      cd00116
      Location:76 → 230
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
      sd00033
      Location:76 → 99
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:74 → 134
      LRR_8; Leucine rich repeat
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q95R94 Q95R94
    Q9VJN8 Q9VJN8

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