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    MTF1 metal regulatory transcription factor 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 714795, updated on 17-Aug-2024

    Summary

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    Official Symbol
    MTF1provided by VGNC
    Official Full Name
    metal regulatory transcription factor 1provided by VGNC
    Primary source
    VGNC:VGNC:74946
    Locus tag
    EGK_00584
    See related
    Ensembl:ENSMMUG00000023275
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See MTF1 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (186717897..186771162)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (37013566..37068032, complement)

    Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene splicing factor 3a subunit 3 Neighboring gene inositol polyphosphate-5-phosphatase B Neighboring gene U6 spliceosomal RNA Neighboring gene chromosome 1 C1orf122 homolog Neighboring gene yrdC N6-threonylcarbamoyltransferase domain containing Neighboring gene mannosidase endo-alpha like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription activator activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in central nervous system development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    metal regulatory transcription factor 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001257795.1 → NP_001244724.1  metal regulatory transcription factor 1

      See identical proteins and their annotated locations for NP_001244724.1

      Status: PROVISIONAL

      Source sequence(s)
      JU334604
      UniProtKB/TrEMBL
      A0A1D5QTP0, A0A8J8XR09, G7MFY1
      Related
      ENSMMUP00000051420.1, ENSMMUT00000075991.2
      Conserved Domains (3) summary
      COG5048
      Location:93 → 291
      COG5048; FOG: Zn-finger [General function prediction only]
      COG5189
      Location:285 → 315
      SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
      sd00017
      Location:234 → 253
      ZF_C2H2; C2H2 Zn finger [structural motif]

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041754.1 Reference Mmul_10 Primary Assembly

      Range
      186717897..186771162
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015135552.2 → XP_014991038.1  metal regulatory transcription factor 1 isoform X1

      UniProtKB/TrEMBL
      A0A1D5QTP0, A0A8J8XR09, G7MFY1
      Conserved Domains (3) summary
      COG5048
      Location:93 → 291
      COG5048; FOG: Zn-finger [General function prediction only]
      COG5189
      Location:285 → 315
      SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
      sd00017
      Location:234 → 253
      ZF_C2H2; C2H2 Zn finger [structural motif]

    2. XM_015135545.2 → XP_014991031.1  metal regulatory transcription factor 1 isoform X1

      UniProtKB/TrEMBL
      A0A1D5QTP0, A0A8J8XR09, G7MFY1
      Conserved Domains (3) summary
      COG5048
      Location:93 → 291
      COG5048; FOG: Zn-finger [General function prediction only]
      COG5189
      Location:285 → 315
      SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
      sd00017
      Location:234 → 253
      ZF_C2H2; C2H2 Zn finger [structural motif]

    3. XM_028845210.1 → XP_028701043.1  metal regulatory transcription factor 1 isoform X2

      Conserved Domains (3) summary
      COG5048
      Location:5 → 203
      COG5048; FOG: Zn-finger [General function prediction only]
      COG5189
      Location:197 → 227
      SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
      sd00017
      Location:146 → 165
      ZF_C2H2; C2H2 Zn finger [structural motif]
    Nucleotide Protein
    Heading Accession and Version

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