ATG2A autophagy related 2A [Macaca mulatta (Rhesus monkey)] - Gene

Summary

Official Symbol: ATG2Aprovided by VGNC
Official Full Name: autophagy related 2Aprovided by VGNC
Primary source: VGNC:VGNC:70145
See related: Ensembl:ENSMMUG00000003973
Gene type: protein coding
RefSeq status: MODEL
Organism: Macaca mulatta
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 14

Exon count:: 41

Annotation release	Status	Assembly	Chr	Location
103	current	Mmul_10 (GCF_003339765.1)	14	NC_041767.1 (9618457..9641675)
102	previous assembly	Mmul_8.0.1 (GCF_000772875.2)	14	NC_027906.1 (9540354..9563758)

Chromosome 14 - NC_041767.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

REN56896 (e-PCR)
- UniSTS:381696

REN56897 (e-PCR)
- UniSTS:381697

REN56898 (e-PCR)
- UniSTS:381698

REN56901 (e-PCR)
- UniSTS:381701

REN56902 (e-PCR)
- UniSTS:381702

REN56904 (e-PCR)
- UniSTS:381704

REN56914 (e-PCR)
- UniSTS:381714

ECD15967 (e-PCR)
- UniSTS:296982

REN56922 (e-PCR)
- UniSTS:381722

REN56924 (e-PCR)
- UniSTS:381724

REN56927 (e-PCR)
- UniSTS:381727

REN56928 (e-PCR)
- UniSTS:381728

REN56930 (e-PCR)
- UniSTS:381730

RH65343 (e-PCR)
- UniSTS:10787

REN56933 (e-PCR)
- UniSTS:381733

REN56934 (e-PCR)
- UniSTS:381734

REN56935 (e-PCR)
- UniSTS:381735

REN56942 (e-PCR)
- UniSTS:381742

REN56943 (e-PCR)
- UniSTS:381743

REN56957 (e-PCR)
- UniSTS:381757

REN56958 (e-PCR)
- UniSTS:381758

REN56959 (e-PCR)
- UniSTS:381759

REN56960 (e-PCR)
- UniSTS:381760

REN56964 (e-PCR)
- UniSTS:381764

REN56965 (e-PCR)
- UniSTS:381765

REN56968 (e-PCR)
- UniSTS:381768

REN56969 (e-PCR)
- UniSTS:381769

REN56970 (e-PCR)
- UniSTS:381770

REN56971 (e-PCR)
- UniSTS:381771

REN56973 (e-PCR)
- UniSTS:381773

REN56974 (e-PCR)
- UniSTS:381774

REN56979 (e-PCR)
- UniSTS:381779

REN56981 (e-PCR)
- UniSTS:381781

REN56985 (e-PCR)
- UniSTS:381785

REN56988 (e-PCR)
- UniSTS:381788

REN56992 (e-PCR)
- UniSTS:381792

ECD21967 (e-PCR)
- UniSTS:302958

ECD02674 (e-PCR)
- UniSTS:283768

ECD01657 (e-PCR)
- UniSTS:282758

ECD07078 (e-PCR)
- UniSTS:288136

ECD09411 (e-PCR)
- UniSTS:290454

ECD00392 (e-PCR)
- UniSTS:281503

ECD04265 (e-PCR)
- UniSTS:285343

ECD15598 (e-PCR)
- UniSTS:296615

ECD09947 (e-PCR)
- UniSTS:290987

ECD04293 (e-PCR)
- UniSTS:285371

ECD17928 (e-PCR)
- UniSTS:298940

G33103 (e-PCR)
- UniSTS:38336

ECD02751 (e-PCR)
- UniSTS:283845

GDB:182516 (e-PCR)
- UniSTS:155384

REN56893 (e-PCR)
- UniSTS:381693

REN56894 (e-PCR)
- UniSTS:381694

REN56895 (e-PCR)
- UniSTS:381695

Homology

NCBI Orthologs

Orthologs from OrthoDB

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables phosphatidylinositol-3-phosphate binding	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in autophagosome assembly	IEA Inferred from Electronic Annotation more info	PubMed
involved_in autophagy of mitochondrion	IEA Inferred from Electronic Annotation more info	PubMed
involved_in piecemeal microautophagy of the nucleus	IEA Inferred from Electronic Annotation more info	PubMed
involved_in reticulophagy	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in extrinsic component of membrane	IEA Inferred from Electronic Annotation more info	PubMed
located_in phagophore assembly site	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: autophagy-related protein 2 homolog A

Names: ATG2 autophagy related 2 homolog A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

NC_041767.1 Reference Mmul_10 Primary Assembly

Range

9618457..9641675

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_015113835.2 → XP_014969321.2 autophagy-related protein 2 homolog A isoform X2

UniProtKB/TrEMBL

H9Z6R3

Conserved Domains (3) summary

COG5043
Location:43 → 240

MRS6; Vacuolar protein sorting-associated protein [Intracellular trafficking and secretion]

pfam13329
Location:1119 → 1234

ATG2_CAD; Autophagy-related protein 2 CAD motif

pfam12624
Location:14 → 108

Chorein_N; N-terminal region of Chorein or VPS13
XM_028833256.1 → XP_028689089.1 autophagy-related protein 2 homolog A isoform X8

UniProtKB/TrEMBL

H9Z6R3

Conserved Domains (2) summary

pfam13329
Location:1054 → 1169

ATG2_CAD; Autophagy-related protein 2 CAD motif

pfam12624
Location:1 → 43

Chorein_N; N-terminal region of Chorein or VPS13
XM_015113834.2 → XP_014969320.2 autophagy-related protein 2 homolog A isoform X1

UniProtKB/TrEMBL

H9Z6R3

Conserved Domains (3) summary

COG5043
Location:43 → 240

MRS6; Vacuolar protein sorting-associated protein [Intracellular trafficking and secretion]

pfam13329
Location:1119 → 1234

ATG2_CAD; Autophagy-related protein 2 CAD motif

pfam12624
Location:14 → 108

Chorein_N; N-terminal region of Chorein or VPS13
XM_015113837.2 → XP_014969323.2 autophagy-related protein 2 homolog A isoform X3

UniProtKB/TrEMBL

H9Z6R3

Conserved Domains (3) summary

COG5043
Location:43 → 240

MRS6; Vacuolar protein sorting-associated protein [Intracellular trafficking and secretion]

pfam13329
Location:1111 → 1226

ATG2_CAD; Autophagy-related protein 2 CAD motif

pfam12624
Location:14 → 108

Chorein_N; N-terminal region of Chorein or VPS13
XM_015113838.2 → XP_014969324.2 autophagy-related protein 2 homolog A isoform X4

UniProtKB/TrEMBL

H9FRR2, H9Z6R3

Conserved Domains (4) summary

COG5043
Location:43 → 240

MRS6; Vacuolar protein sorting-associated protein [Intracellular trafficking and secretion]

pfam13329
Location:1119 → 1234

ATG2_CAD; Autophagy-related protein 2 CAD motif

pfam09333
Location:1841 → 1934

ATG_C; Autophagy-related protein C terminal domain

pfam12624
Location:14 → 108

Chorein_N; N-terminal region of Chorein or VPS13
XM_001114733.3 → XP_001114733.2 autophagy-related protein 2 homolog A isoform X5

UniProtKB/TrEMBL

H9FRR2, H9Z6R3

Conserved Domains (4) summary

COG5043
Location:43 → 240

MRS6; Vacuolar protein sorting-associated protein [Intracellular trafficking and secretion]

pfam13329
Location:1119 → 1234

ATG2_CAD; Autophagy-related protein 2 CAD motif

pfam09333
Location:1839 → 1932

ATG_C; Autophagy-related protein C terminal domain

pfam12624
Location:14 → 108

Chorein_N; N-terminal region of Chorein or VPS13
XM_028833254.1 → XP_028689087.1 autophagy-related protein 2 homolog A isoform X6

UniProtKB/TrEMBL

F6XYK2, H9FRR2, H9Z6R3

Related

ENSMMUP00000005302.4, ENSMMUT00000005632.4

Conserved Domains (4) summary

COG5043
Location:43 → 240

MRS6; Vacuolar protein sorting-associated protein [Intracellular trafficking and secretion]

pfam13329
Location:1111 → 1226

ATG2_CAD; Autophagy-related protein 2 CAD motif

pfam09333
Location:1833 → 1926

ATG_C; Autophagy-related protein C terminal domain

pfam12624
Location:14 → 108

Chorein_N; N-terminal region of Chorein or VPS13
XM_028833255.1 → XP_028689088.1 autophagy-related protein 2 homolog A isoform X7

UniProtKB/TrEMBL

H9FRR2, H9Z6R3

Conserved Domains (4) summary

COG5043
Location:43 → 240

MRS6; Vacuolar protein sorting-associated protein [Intracellular trafficking and secretion]

pfam13329
Location:1111 → 1226

ATG2_CAD; Autophagy-related protein 2 CAD motif

pfam09333
Location:1831 → 1924

ATG_C; Autophagy-related protein C terminal domain

pfam12624
Location:14 → 108

Chorein_N; N-terminal region of Chorein or VPS13