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    TRAPPC12 trafficking protein particle complex subunit 12 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 707758, updated on 17-Aug-2024

    Summary

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    Official Symbol
    TRAPPC12provided by VGNC
    Official Full Name
    trafficking protein particle complex subunit 12provided by VGNC
    Primary source
    VGNC:VGNC:79429
    See related
    Ensembl:ENSMMUG00000019468
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    TTC15
    Orthologs
    human mouse all
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    Genomic context

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    See TRAPPC12 in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 13 NC_041766.1 (105313693..105417791, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 13 NC_027905.1 (3244526..3349889)

    Chromosome 13 - NC_041766.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114671783 Neighboring gene acireductone dioxygenase 1 Neighboring gene uncharacterized LOC114671784 Neighboring gene EARP complex and GARP complex interacting protein 1 Neighboring gene keratin-associated protein 16-1-like Neighboring gene uncharacterized LOC114671786

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Golgi apparatus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of TRAPP complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    trafficking protein particle complex subunit 12
    Names
    tetratricopeptide repeat domain 15
    trafficking protein particle complex 12

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041766.1 Reference Mmul_10 Primary Assembly

      Range
      105313693..105417791 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015111615.2 → XP_014967101.2  trafficking protein particle complex subunit 12 isoform X3

      UniProtKB/TrEMBL
      A0A5F8AJA9
      Conserved Domains (3) summary
      PHA03247
      Location:35 → 319
      PHA03247; large tegument protein UL36; Provisional
      COG0457
      Location:489 → 633
      TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
      sd00006
      Location:483 → 510
      TPR; TPR repeat [structural motif]

    2. XM_015111612.2 → XP_014967098.2  trafficking protein particle complex subunit 12 isoform X1

      UniProtKB/TrEMBL
      A0A5F8AJA9
      Related
      ENSMMUP00000077029.1, ENSMMUT00000105172.1
      Conserved Domains (3) summary
      PHA03247
      Location:35 → 319
      PHA03247; large tegument protein UL36; Provisional
      COG0457
      Location:497 → 755
      TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
      sd00006
      Location:605 → 632
      TPR; TPR repeat [structural motif]

    3. XM_015111613.2 → XP_014967099.2  trafficking protein particle complex subunit 12 isoform X2

      UniProtKB/TrEMBL
      A0A1D5RK61, A0A5F8AJA9, F6QS76
      Related
      ENSMMUP00000025583.3, ENSMMUT00000027351.3
      Conserved Domains (5) summary
      PHA03169
      Location:3 → 163
      PHA03169; hypothetical protein; Provisional
      COG0457
      Location:443 → 701
      TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
      PRK07764
      Location:89 → 211
      PRK07764; DNA polymerase III subunits gamma and tau; Validated
      PRK12323
      Location:96 → 331
      PRK12323; DNA polymerase III subunits gamma and tau; Provisional
      sd00006
      Location:551 → 578
      TPR; TPR repeat [structural motif]

    4. XM_028832011.1 → XP_028687844.1  trafficking protein particle complex subunit 12 isoform X2

      UniProtKB/TrEMBL
      A0A1D5RK61, A0A5F8AJA9, F6QS76
      Related
      ENSMMUP00000060705.2, ENSMMUT00000062262.2
      Conserved Domains (5) summary
      PHA03169
      Location:3 → 163
      PHA03169; hypothetical protein; Provisional
      COG0457
      Location:443 → 701
      TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
      PRK07764
      Location:89 → 211
      PRK07764; DNA polymerase III subunits gamma and tau; Validated
      PRK12323
      Location:96 → 331
      PRK12323; DNA polymerase III subunits gamma and tau; Provisional
      sd00006
      Location:551 → 578
      TPR; TPR repeat [structural motif]

    5. XM_028832012.1 → XP_028687845.1  trafficking protein particle complex subunit 12 isoform X5

      Conserved Domains (1) summary
      PHA03247
      Location:35 → 319
      PHA03247; large tegument protein UL36; Provisional

    6. XM_015111616.2 → XP_014967102.2  trafficking protein particle complex subunit 12 isoform X4

      UniProtKB/TrEMBL
      A0A5F8AJA9
      Conserved Domains (3) summary
      PHA03247
      Location:35 → 319
      PHA03247; large tegument protein UL36; Provisional
      sd00006
      Location:605 → 633
      TPR; TPR repeat [structural motif]
      pfam13174
      Location:606 → 636
      TPR_6; Tetratricopeptide repeat
    Nucleotide Protein
    Heading Accession and Version

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