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    PLRG1 pleiotropic regulator 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 701044, updated on 17-Aug-2024

    Summary

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    Official Symbol
    PLRG1provided by VGNC
    Official Full Name
    pleiotropic regulator 1provided by VGNC
    Primary source
    VGNC:VGNC:76180
    See related
    Ensembl:ENSMMUG00000021301
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See PLRG1 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 5 NC_041758.1 (152161860..152177747, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 5 NC_027897.1 (154440127..154455982, complement)

    Chromosome 5 - NC_041758.1Genomic Context describing neighboring genes Neighboring gene dachsous cadherin-related 2 Neighboring gene methylosome protein 50 pseudogene Neighboring gene U6 spliceosomal RNA Neighboring gene fibrinogen beta chain Neighboring gene fibrinogen alpha chain

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in mRNA splicing, via spliceosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of Prp19 complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of catalytic step 2 spliceosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of precatalytic spliceosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    pleiotropic regulator 1
    Names
    pleiotropic regulator 1 (PRL1 homolog, Arabidopsis)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041758.1 Reference Mmul_10 Primary Assembly

      Range
      152161860..152177747 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015139371.2 → XP_014994857.1  pleiotropic regulator 1

      UniProtKB/TrEMBL
      G7MS61, H9ETC2
      Related
      ENSMMUP00000054656.1, ENSMMUT00000055238.2
      Conserved Domains (3) summary
      COG2319
      Location:193 → 507
      WD40; WD40 repeat [General function prediction only]
      cd00200
      Location:196 → 490
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      sd00039
      Location:209 → 244
      7WD40; WD40 repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version

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