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    KATNAL2 katanin catalytic subunit A1 like 2 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 696856, updated on 17-Aug-2024

    Summary

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    Official Symbol
    KATNAL2provided by VGNC
    Official Full Name
    katanin catalytic subunit A1 like 2provided by VGNC
    Primary source
    VGNC:VGNC:73904
    See related
    Ensembl:ENSMMUG00000015952
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See KATNAL2 in Genome Data Viewer
    Location:
    chromosome: 18
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 18 NC_041771.1 (35382538..35507856, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 18 NC_027910.1 (35915362..35974502)

    Chromosome 18 - NC_041771.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114673681 Neighboring gene immediate early response 3 interacting protein 1 Neighboring gene small nucleolar RNA SNORA44 Neighboring gene haloacid dehalogenase like hydrolase domain containing 2 Neighboring gene elongin-A3-like Neighboring gene elongin-A3-like Neighboring gene elongin A2 Neighboring gene protein inhibitor of activated STAT 2 Neighboring gene ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    katanin p60 ATPase-containing subunit A-like 2
    XP_028693624.1
    XP_028693625.1
    XP_028693626.1
    XP_028693627.1
    XP_028693628.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041771.1 Reference Mmul_10 Primary Assembly

      Range
      35382538..35507856 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028837791.1 → XP_028693624.1  katanin p60 ATPase-containing subunit A-like 2 isoform X1

      UniProtKB/TrEMBL
      F7DD56, G7MM07
      Related
      ENSMMUP00000020986.4, ENSMMUT00000022432.4
      Conserved Domains (2) summary
      smart00667
      Location:25 → 55
      LisH; Lissencephaly type-1-like homology motif
      COG0464
      Location:238 → 533
      SpoVK; AAA+-type ATPase, SpoVK/Ycf46/Vps4 family [Cell wall/membrane/envelope biogenesis, Cell cycle control, cell division, chromosome partitioning, Signal transduction mechanisms]

    2. XM_028837793.1 → XP_028693626.1  katanin p60 ATPase-containing subunit A-like 2 isoform X3

      UniProtKB/TrEMBL
      G7MM07
      Conserved Domains (2) summary
      smart00667
      Location:21 → 51
      LisH; Lissencephaly type-1-like homology motif
      COG0464
      Location:234 → 529
      SpoVK; AAA+-type ATPase, SpoVK/Ycf46/Vps4 family [Cell wall/membrane/envelope biogenesis, Cell cycle control, cell division, chromosome partitioning, Signal transduction mechanisms]

    3. XM_028837794.1 → XP_028693627.1  katanin p60 ATPase-containing subunit A-like 2 isoform X4

      UniProtKB/TrEMBL
      G7MM07
      Conserved Domains (1) summary
      COG0464
      Location:168 → 463
      SpoVK; AAA+-type ATPase, SpoVK/Ycf46/Vps4 family [Cell wall/membrane/envelope biogenesis, Cell cycle control, cell division, chromosome partitioning, Signal transduction mechanisms]

    4. XM_028837792.1 → XP_028693625.1  katanin p60 ATPase-containing subunit A-like 2 isoform X2

      UniProtKB/TrEMBL
      G7MM07
      Conserved Domains (2) summary
      smart00667
      Location:25 → 55
      LisH; Lissencephaly type-1-like homology motif
      COG0464
      Location:237 → 532
      SpoVK; AAA+-type ATPase, SpoVK/Ycf46/Vps4 family [Cell wall/membrane/envelope biogenesis, Cell cycle control, cell division, chromosome partitioning, Signal transduction mechanisms]

    5. XM_028837795.1 → XP_028693628.1  katanin p60 ATPase-containing subunit A-like 2 isoform X5

      Conserved Domains (2) summary
      smart00667
      Location:25 → 55
      LisH; Lissencephaly type-1-like homology motif
      COG0464
      Location:229 → 439
      SpoVK; AAA+-type ATPase, SpoVK/Ycf46/Vps4 family [Cell wall/membrane/envelope biogenesis, Cell cycle control, cell division, chromosome partitioning, Signal transduction mechanisms]
    Nucleotide Protein
    Heading Accession and Version

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