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    SUSD4 sushi domain containing 4 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 703741, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SUSD4provided by VGNC
    Official Full Name
    sushi domain containing 4provided by VGNC
    Primary source
    VGNC:VGNC:78211
    See related
    Ensembl:ENSMMUG00000012695
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See SUSD4 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (80902548..81050411, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (142881856..143029615)

    Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene dispatched RND transporter family member 1 Neighboring gene small nucleolar RNA U13 Neighboring gene toll like receptor 5 Neighboring gene chromosome 8 open reading frame 59 homolog pseudogene Neighboring gene coiled-coil domain containing 185

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in negative regulation of complement activation, alternative pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of complement activation, classical pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    sushi domain-containing protein 4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041754.1 Reference Mmul_10 Primary Assembly

      Range
      80902548..81050411 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015115575.2 → XP_014971061.1  sushi domain-containing protein 4 isoform X2

      UniProtKB/TrEMBL
      F7G9C8, F7G9N8, H9FWG2
      Related
      ENSMMUP00000038356.3, ENSMMUT00000045331.3
      Conserved Domains (4) summary
      cd00033
      Location:181 → 238
      CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
      smart00032
      Location:244 → 298
      CCP; Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR)
      PHA02927
      Location:55 → 297
      PHA02927; secreted complement-binding protein; Provisional
      pfam00084
      Location:123 → 178
      Sushi; Sushi repeat (SCR repeat)

    2. XM_015115563.2 → XP_014971049.1  sushi domain-containing protein 4 isoform X1

      UniProtKB/TrEMBL
      H9FWG2
      Conserved Domains (2) summary
      PHA02639
      Location:31 → 239
      PHA02639; EEV host range protein; Provisional
      smart00032
      Location:246 → 300
      CCP; Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR)

    3. XM_001099084.4 → XP_001099084.1  sushi domain-containing protein 4 isoform X1

      See identical proteins and their annotated locations for XP_001099084.1

      UniProtKB/TrEMBL
      H9FWG2
      Conserved Domains (2) summary
      PHA02639
      Location:31 → 239
      PHA02639; EEV host range protein; Provisional
      smart00032
      Location:246 → 300
      CCP; Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR)

    4. XM_015115579.2 → XP_014971065.1  sushi domain-containing protein 4 isoform X3

      UniProtKB/TrEMBL
      A0A5F7ZVC6, F7DX72
      Related
      ENSMMUP00000076748.1, ENSMMUT00000109577.1
      Conserved Domains (2) summary
      cd00033
      Location:181 → 238
      CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
      pfam00084
      Location:123 → 178
      Sushi; Sushi repeat (SCR repeat)
    Nucleotide Protein
    Heading Accession and Version

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