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    LOC718495 podocan-like protein 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 718495, updated on 9-Nov-2023

    Summary

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    Gene symbol
    LOC718495
    Gene description
    podocan-like protein 1
    See related
    Ensembl:ENSMMUG00000008324
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    PODNL1
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    Genomic context

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    See LOC718495 in Genome Data Viewer
    Location:
    chromosome: 19
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 19 NC_041772.1 (13535693..13542621, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 19 NC_027911.1 (13937086..13945243, complement)

    Chromosome 19 - NC_041772.1Genomic Context describing neighboring genes Neighboring gene nanos C2HC-type zinc finger 3 Neighboring gene microRNA mir-181d Neighboring gene break repair meiotic recombinase recruitment factor 1 Neighboring gene coiled-coil and C2 domain containing 1A Neighboring gene podocan-like protein 1 Neighboring gene DDB1 and CUL4 associated factor 15 Neighboring gene regulatory factor X1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    podocan-like protein 1
    Names
    podocan like 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041772.1 Reference Mmul_10 Primary Assembly

      Range
      13535693..13542621 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028839474.1 → XP_028695307.1  podocan-like protein 1

      UniProtKB/TrEMBL
      F7HTZ2
      Related
      ENSMMUP00000010914.4, ENSMMUT00000011641.4
      Conserved Domains (4) summary
      PRK15370
      Location:209 → 443
      PRK15370; E3 ubiquitin-protein ligase SlrP; Provisional
      COG4886
      Location:79 → 313
      LRR; Leucine-rich repeat (LRR) protein [Transcription]
      sd00033
      Location:90 → 113
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:423 → 479
      LRR_8; Leucine rich repeat
    Nucleotide Protein
    Heading Accession and Version

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