|
Name |
Accession |
Description |
Interval |
E-value |
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
91-294 |
1.99e-25 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 108.48 E-value: 1.99e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622896528 91 QHLSLQNNQLQELPyNELSRLSGLRTLNLHNNLISSegLPdEAFESLTQLQHIYVAHNKLSVAPQflprslrvadlaanq 170
Cdd:COG4886 116 ESLDLSGNQLTDLP-EELANLTNLKELDLSNNQLTD--LP-EPLGNLTNLKSLDLSNNQLTDLPE--------------- 176
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622896528 171 vmEIFPLTfgekpALRSVYLHNNQLSNAglpPDAFRGSEAVTTLSLSNNRFSYLPPSLP--SSLERLHLQNNLISKVPrg 248
Cdd:COG4886 177 --ELGNLT-----NLKELDLSNNQITDL---PEPLGNLTNLEELDLSGNQLTDLPEPLAnlTNLETLDLSNNQLTDLP-- 244
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 1622896528 249 ALSRQTQLRELYLQHNQLTdsglDATTFSKLHSLEYLDLSHNQLTT 294
Cdd:COG4886 245 ELGNLTNLEELDLSNNQLT----DLPPLANLTNLKTLDLSNNQLTD 286
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
208-502 |
1.57e-21 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 96.93 E-value: 1.57e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622896528 208 SEAVTTLSLSNNRFSYLPPSLPSSLERLHLQNNLISKVPRGALSRQTQLRELYLQHNQltdsgldatTFSKLHSLEYLDL 287
Cdd:COG4886 50 TLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLLLGLTDLGDLTNLTELDLSGNE---------ELSNLTNLESLDL 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622896528 288 SHNQLTTVPAGLPR--TLAILHLGRNRIRQVEAArLHGARGLRYLLLQHNQLgsSGLPAgALRPLRGLHTLHLYGNGLDR 365
Cdd:COG4886 121 SGNQLTDLPEELANltNLKELDLSNNQLTDLPEP-LGNLTNLKSLDLSNNQL--TDLPE-ELGNLTNLKELDLSNNQITD 196
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622896528 366 VPLAL--PRRLCALVLPHNHVATLGArELAATPGLMELNLAYNRLTSArvhhRAFRRLRTLRSLDLAGNQLTRLPMGLP- 442
Cdd:COG4886 197 LPEPLgnLTNLEELDLSGNQLTDLPE-PLANLTNLETLDLSNNQLTDL----PELGNLTNLEELDLSNNQLTDLPPLANl 271
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622896528 443 TGLHTLRLQRNQLRMLEPEPLTGLDQLKELSLAHNRLRVGDIGPGTWHELQALQVRHRLV 502
Cdd:COG4886 272 TNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLK 331
|
|
| PRK15370 |
PRK15370 |
type III secretion system effector E3 ubiquitin transferase SlrP; |
209-443 |
2.51e-18 |
|
type III secretion system effector E3 ubiquitin transferase SlrP;
Pssm-ID: 185268 [Multi-domain] Cd Length: 754 Bit Score: 88.60 E-value: 2.51e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622896528 209 EAVTTLSLSNNRFSYLPPSLPSSLERLHLQNNLISKVPRgalSRQTQLRELYLQHNQLTDsgLDATTFSKLHSLeylDLS 288
Cdd:PRK15370 199 EQITTLILDNNELKSLPENLQGNIKTLYANSNQLTSIPA---TLPDTIQEMELSINRITE--LPERLPSALQSL---DLF 270
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622896528 289 HNQLTTVPAGLPRTLAILHLGRNRIRQVEAarlHGARGLRYLLLQHNQLgsSGLPAgALRPlrGLHTLHLYGNGLDRVPL 368
Cdd:PRK15370 271 HNKISCLPENLPEELRYLSVYDNSIRTLPA---HLPSGITHLNVQSNSL--TALPE-TLPP--GLKTLEAGENALTSLPA 342
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1622896528 369 ALPRRLCALVLPHNHVATLGArelAATPGLMELNLAYNRLTSARVHHRAfrrlrTLRSLDLAGNQLTRLPMGLPT 443
Cdd:PRK15370 343 SLPPELQVLDVSKNQITVLPE---TLPPTITTLDVSRNALTNLPENLPA-----ALQIMQASRNNLVRLPESLPH 409
|
|
| PRK15370 |
PRK15370 |
type III secretion system effector E3 ubiquitin transferase SlrP; |
75-300 |
4.22e-18 |
|
type III secretion system effector E3 ubiquitin transferase SlrP;
Pssm-ID: 185268 [Multi-domain] Cd Length: 754 Bit Score: 87.83 E-value: 4.22e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622896528 75 DGLDLRVFPDNITRATQHLSLQNNQLQELPYNelsrLSG-LRTLNLHNNLISS--EGLPD-------------EAFESL- 137
Cdd:PRK15370 186 KILGLTTIPACIPEQITTLILDNNELKSLPEN----LQGnIKTLYANSNQLTSipATLPDtiqemelsinritELPERLp 261
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622896528 138 TQLQHIYVAHNKLSVAPQFLPRSLRVADLAANQVMEI---FPLTFGEkpalrsVYLHNNQLS--NAGLPPDafrgseaVT 212
Cdd:PRK15370 262 SALQSLDLFHNKISCLPENLPEELRYLSVYDNSIRTLpahLPSGITH------LNVQSNSLTalPETLPPG-------LK 328
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622896528 213 TLSLSNNRFSYLPPSLPSSLERLHLQNNLISKVPRgalSRQTQLRELYLQHNQLTD--SGLDAttfsklhSLEYLDLSHN 290
Cdd:PRK15370 329 TLEAGENALTSLPASLPPELQVLDVSKNQITVLPE---TLPPTITTLDVSRNALTNlpENLPA-------ALQIMQASRN 398
|
250
....*....|
gi 1622896528 291 QLTTVPAGLP 300
Cdd:PRK15370 399 NLVRLPESLP 408
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
211-438 |
1.19e-15 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 75.98 E-value: 1.19e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622896528 211 VTTLSLSNNRFSYLP-PSLPSSLERLHLQNNLISKVPrgALSRQTQLRELYLQHNQLTdsgldattfsklhSLEYLDlsh 289
Cdd:cd21340 4 ITHLYLNDKNITKIDnLSLCKNLKVLYLYDNKITKIE--NLEFLTNLTHLYLQNNQIE-------------KIENLE--- 65
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622896528 290 nqlttvpaGLPRtLAILHLGRNRIRQVEAarLHGARGLRYLLLQHNQLGSsglpagalrplrglhtlhlyGNGL---DRV 366
Cdd:cd21340 66 --------NLVN-LKKLYLGGNRISVVEG--LENLTNLEELHIENQRLPP--------------------GEKLtfdPRS 114
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1622896528 367 PLALPRRLCALVLPHNHVATLgaRELAATPGLMELNLAYNRLTSARVHHRAFRRLRTLRSLDLAGNQLTRLP 438
Cdd:cd21340 115 LAALSNSLRVLNISGNNIDSL--EPLAPLRNLEQLDASNNQISDLEELLDLLSSWPSLRELDLTGNPVCKKP 184
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
92-361 |
1.09e-10 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 61.34 E-value: 1.09e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622896528 92 HLSLQNNQLQELPynELSRLSGLRTLNLHNNLISS-EGLpdeafESLTQLQHiyvahnklsvapqflprslrvadlaanq 170
Cdd:cd21340 6 HLYLNDKNITKID--NLSLCKNLKVLYLYDNKITKiENL-----EFLTNLTH---------------------------- 50
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622896528 171 vmeifpltfgekpalrsVYLHNNQLSnaglppdafrgseavttlSLSNnrFSYLPpslpsSLERLHLQNNLISKVprGAL 250
Cdd:cd21340 51 -----------------LYLQNNQIE------------------KIEN--LENLV-----NLKKLYLGGNRISVV--EGL 86
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622896528 251 SRQTQLRELYLQHNQLtDSGL-----DATTFSKLHSLEYLDLSHNQLTTVpaglpRTLAILHlgrnrirqveaarlhgar 325
Cdd:cd21340 87 ENLTNLEELHIENQRL-PPGEkltfdPRSLAALSNSLRVLNISGNNIDSL-----EPLAPLR------------------ 142
|
250 260 270
....*....|....*....|....*....|....*.
gi 1622896528 326 GLRYLLLQHNQLGSSGLPAGALRPLRGLHTLHLYGN 361
Cdd:cd21340 143 NLEQLDASNNQISDLEELLDLLSSWPSLRELDLTGN 178
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
230-292 |
2.11e-10 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 56.38 E-value: 2.11e-10
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1622896528 230 SSLERLHLQNNLISKVPRGALSRQTQLRELYLQHNQLTdsGLDATTFSKLHSLEYLDLSHNQL 292
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLT--TLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
422-479 |
4.01e-06 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 44.44 E-value: 4.01e-06
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1622896528 422 RTLRSLDLAGNQLTRLPMGLPTGLHTLR---LQRNQLRMLEPEPLTGLDQLKELSLAHNRL 479
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKvldLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
91-294 |
1.99e-25 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 108.48 E-value: 1.99e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622896528 91 QHLSLQNNQLQELPyNELSRLSGLRTLNLHNNLISSegLPdEAFESLTQLQHIYVAHNKLSVAPQflprslrvadlaanq 170
Cdd:COG4886 116 ESLDLSGNQLTDLP-EELANLTNLKELDLSNNQLTD--LP-EPLGNLTNLKSLDLSNNQLTDLPE--------------- 176
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622896528 171 vmEIFPLTfgekpALRSVYLHNNQLSNAglpPDAFRGSEAVTTLSLSNNRFSYLPPSLP--SSLERLHLQNNLISKVPrg 248
Cdd:COG4886 177 --ELGNLT-----NLKELDLSNNQITDL---PEPLGNLTNLEELDLSGNQLTDLPEPLAnlTNLETLDLSNNQLTDLP-- 244
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 1622896528 249 ALSRQTQLRELYLQHNQLTdsglDATTFSKLHSLEYLDLSHNQLTT 294
Cdd:COG4886 245 ELGNLTNLEELDLSNNQLT----DLPPLANLTNLKTLDLSNNQLTD 286
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
93-470 |
1.11e-23 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 103.47 E-value: 1.11e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622896528 93 LSLQNNQLQELPYNELSRLSGLRTLNLHNNLISSEGLPDEAFESLTQLQHIYVAHNKLSVAPQFLPRSLRVADLAANQvm 172
Cdd:COG4886 30 LLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLLLGLTDLGDLTNLTELDLSGNE-- 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622896528 173 EIFPLTfgekpALRSVYLHNNQLSNAglpPDAFRGSEAVTTLSLSNNRFSYLPPSLPS--SLERLHLQNNLISKVPRgAL 250
Cdd:COG4886 108 ELSNLT-----NLESLDLSGNQLTDL---PEELANLTNLKELDLSNNQLTDLPEPLGNltNLKSLDLSNNQLTDLPE-EL 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622896528 251 SRQTQLRELYLQHNQLTDSGldaTTFSKLHSLEYLDLSHNQLTTVPAGLPR--TLAILHLGRNRIRQVEAarLHGARGLR 328
Cdd:COG4886 179 GNLTNLKELDLSNNQITDLP---EPLGNLTNLEELDLSGNQLTDLPEPLANltNLETLDLSNNQLTDLPE--LGNLTNLE 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622896528 329 YLLLQHNQLgsSGLPagALRPLRGLHTLHLYGNGLDRVPLALPRRLCALVLPHNHVATLGARELAATPGLMELNLAYNRL 408
Cdd:COG4886 254 ELDLSNNQL--TDLP--PLANLTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLL 329
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1622896528 409 TSARVHHRAFRRLRTLRSLDLAGNQLTRLPMGLPTGLHTLRLQRNQLRMLEPEPLTGLDQLK 470
Cdd:COG4886 330 LKGLLVTLTTLALSLSLLALLTLLLLLNLLSLLLTLLLTLGLLGLLEATLLTLALLLLTLLL 391
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
71-337 |
1.12e-21 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 97.31 E-value: 1.12e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622896528 71 TVDCDGLDLRVFPDNITRAT--QHLSLQNNQLQELPyNELSRLSGLRTLNLHNNLISSegLPDEaFESLTQLQHIYVAHN 148
Cdd:COG4886 117 SLDLSGNQLTDLPEELANLTnlKELDLSNNQLTDLP-EPLGNLTNLKSLDLSNNQLTD--LPEE-LGNLTNLKELDLSNN 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622896528 149 KLSVapqflprslrvadlaanqvmeiFPLTFGEKPALRSVYLHNNQLSNAglpPDAFRGSEAVTTLSLSNNRFSYLPP-S 227
Cdd:COG4886 193 QITD----------------------LPEPLGNLTNLEELDLSGNQLTDL---PEPLANLTNLETLDLSNNQLTDLPElG 247
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622896528 228 LPSSLERLHLQNNLISKVPrgALSRQTQLRELYLQHNQLTDSGLDATTFSKLHSLEYLDLSHNQLTTVPAGLPRTLAILH 307
Cdd:COG4886 248 NLTNLEELDLSNNQLTDLP--PLANLTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLL 325
|
250 260 270
....*....|....*....|....*....|
gi 1622896528 308 LGRNRIRQVEAARLHGARGLRYLLLQHNQL 337
Cdd:COG4886 326 LLLLLKGLLVTLTTLALSLSLLALLTLLLL 355
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
208-502 |
1.57e-21 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 96.93 E-value: 1.57e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622896528 208 SEAVTTLSLSNNRFSYLPPSLPSSLERLHLQNNLISKVPRGALSRQTQLRELYLQHNQltdsgldatTFSKLHSLEYLDL 287
Cdd:COG4886 50 TLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLLLGLTDLGDLTNLTELDLSGNE---------ELSNLTNLESLDL 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622896528 288 SHNQLTTVPAGLPR--TLAILHLGRNRIRQVEAArLHGARGLRYLLLQHNQLgsSGLPAgALRPLRGLHTLHLYGNGLDR 365
Cdd:COG4886 121 SGNQLTDLPEELANltNLKELDLSNNQLTDLPEP-LGNLTNLKSLDLSNNQL--TDLPE-ELGNLTNLKELDLSNNQITD 196
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622896528 366 VPLAL--PRRLCALVLPHNHVATLGArELAATPGLMELNLAYNRLTSArvhhRAFRRLRTLRSLDLAGNQLTRLPMGLP- 442
Cdd:COG4886 197 LPEPLgnLTNLEELDLSGNQLTDLPE-PLANLTNLETLDLSNNQLTDL----PELGNLTNLEELDLSNNQLTDLPPLANl 271
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622896528 443 TGLHTLRLQRNQLRMLEPEPLTGLDQLKELSLAHNRLRVGDIGPGTWHELQALQVRHRLV 502
Cdd:COG4886 272 TNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLK 331
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
192-496 |
1.32e-20 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 94.23 E-value: 1.32e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622896528 192 NNQLSNAGLPPDAFRGSEAVTTLSLSNNRfsylPPSLPSSLERLHLQNNLISKVPRgALSRQTQLRELYLQHNQLTDSGl 271
Cdd:COG4886 79 LLLLSLLLLGLTDLGDLTNLTELDLSGNE----ELSNLTNLESLDLSGNQLTDLPE-ELANLTNLKELDLSNNQLTDLP- 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622896528 272 daTTFSKLHSLEYLDLSHNQLTTVPAGLPR--TLAILHLGRNRIRQVEAArLHGARGLRYLLLQHNQLGSsgLPAgALRP 349
Cdd:COG4886 153 --EPLGNLTNLKSLDLSNNQLTDLPEELGNltNLKELDLSNNQITDLPEP-LGNLTNLEELDLSGNQLTD--LPE-PLAN 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622896528 350 LRGLHTLHLYGNGLDRVPlalprrlcalvlphnhvatlgarELAATPGLMELNLAYNRLTSARvhhrAFRRLRTLRSLDL 429
Cdd:COG4886 227 LTNLETLDLSNNQLTDLP-----------------------ELGNLTNLEELDLSNNQLTDLP----PLANLTNLKTLDL 279
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1622896528 430 AGNQLTRLPM-GLPTGLHTLRLQRNQLRMLEPEPLTGLDQLKELSLAHNRLRVGDIGPGTWHELQALQ 496
Cdd:COG4886 280 SNNQLTDLKLkELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLL 347
|
|
| PRK15370 |
PRK15370 |
type III secretion system effector E3 ubiquitin transferase SlrP; |
209-443 |
2.51e-18 |
|
type III secretion system effector E3 ubiquitin transferase SlrP;
Pssm-ID: 185268 [Multi-domain] Cd Length: 754 Bit Score: 88.60 E-value: 2.51e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622896528 209 EAVTTLSLSNNRFSYLPPSLPSSLERLHLQNNLISKVPRgalSRQTQLRELYLQHNQLTDsgLDATTFSKLHSLeylDLS 288
Cdd:PRK15370 199 EQITTLILDNNELKSLPENLQGNIKTLYANSNQLTSIPA---TLPDTIQEMELSINRITE--LPERLPSALQSL---DLF 270
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622896528 289 HNQLTTVPAGLPRTLAILHLGRNRIRQVEAarlHGARGLRYLLLQHNQLgsSGLPAgALRPlrGLHTLHLYGNGLDRVPL 368
Cdd:PRK15370 271 HNKISCLPENLPEELRYLSVYDNSIRTLPA---HLPSGITHLNVQSNSL--TALPE-TLPP--GLKTLEAGENALTSLPA 342
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1622896528 369 ALPRRLCALVLPHNHVATLGArelAATPGLMELNLAYNRLTSARVHHRAfrrlrTLRSLDLAGNQLTRLPMGLPT 443
Cdd:PRK15370 343 SLPPELQVLDVSKNQITVLPE---TLPPTITTLDVSRNALTNLPENLPA-----ALQIMQASRNNLVRLPESLPH 409
|
|
| PRK15370 |
PRK15370 |
type III secretion system effector E3 ubiquitin transferase SlrP; |
75-300 |
4.22e-18 |
|
type III secretion system effector E3 ubiquitin transferase SlrP;
Pssm-ID: 185268 [Multi-domain] Cd Length: 754 Bit Score: 87.83 E-value: 4.22e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622896528 75 DGLDLRVFPDNITRATQHLSLQNNQLQELPYNelsrLSG-LRTLNLHNNLISS--EGLPD-------------EAFESL- 137
Cdd:PRK15370 186 KILGLTTIPACIPEQITTLILDNNELKSLPEN----LQGnIKTLYANSNQLTSipATLPDtiqemelsinritELPERLp 261
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622896528 138 TQLQHIYVAHNKLSVAPQFLPRSLRVADLAANQVMEI---FPLTFGEkpalrsVYLHNNQLS--NAGLPPDafrgseaVT 212
Cdd:PRK15370 262 SALQSLDLFHNKISCLPENLPEELRYLSVYDNSIRTLpahLPSGITH------LNVQSNSLTalPETLPPG-------LK 328
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622896528 213 TLSLSNNRFSYLPPSLPSSLERLHLQNNLISKVPRgalSRQTQLRELYLQHNQLTD--SGLDAttfsklhSLEYLDLSHN 290
Cdd:PRK15370 329 TLEAGENALTSLPASLPPELQVLDVSKNQITVLPE---TLPPTITTLDVSRNALTNlpENLPA-------ALQIMQASRN 398
|
250
....*....|
gi 1622896528 291 QLTTVPAGLP 300
Cdd:PRK15370 399 NLVRLPESLP 408
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
93-479 |
9.87e-18 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 86.83 E-value: 9.87e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622896528 93 LSLQNNQLQELPYNELSRLSGLRTLNLHNNLISSE-----------------------GLPDEaFESLTQLQHIYVAHNK 149
Cdd:PLN00113 145 LDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKipnsltnltslefltlasnqlvgQIPRE-LGQMKSLKWIYLGYNN 223
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622896528 150 LSVA-PQFLPR--SLRVADLAANQVMEIFPLTFGEKPALRSVYLHNNQLSNAgLPPDAFrGSEAVTTLSLSNNRFSYLPP 226
Cdd:PLN00113 224 LSGEiPYEIGGltSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGP-IPPSIF-SLQKLISLDLSDNSLSGEIP 301
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622896528 227 SLP---SSLERLHL-QNNLISKVPRgALSRQTQLRELYLQHNQLtdSGLDATTFSKLHSLEYLDLSHNQLT-TVPAGLPR 301
Cdd:PLN00113 302 ELViqlQNLEILHLfSNNFTGKIPV-ALTSLPRLQVLQLWSNKF--SGEIPKNLGKHNNLTVLDLSTNNLTgEIPEGLCS 378
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622896528 302 T--LAILHLGRNRIRQVEAARLHGARGLRYLLLQHNQLgSSGLPAGALR-PL---RGLHTLHLYGN---------GLDRV 366
Cdd:PLN00113 379 SgnLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSF-SGELPSEFTKlPLvyfLDISNNNLQGRinsrkwdmpSLQML 457
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622896528 367 PLA-------LP-----RRLCALVLPHNHVATLGARELAATPGLMELNLAYNRLTSarVHHRAFRRLRTLRSLDLAGNQL 434
Cdd:PLN00113 458 SLArnkffggLPdsfgsKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSG--EIPDELSSCKKLVSLDLSHNQL 535
|
410 420 430 440
....*....|....*....|....*....|....*....|....*....
gi 1622896528 435 T-RLPMG---LPTgLHTLRLQRNQLRMLEPEPLTGLDQLKELSLAHNRL 479
Cdd:PLN00113 536 SgQIPASfseMPV-LSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHL 583
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
67-507 |
5.25e-17 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 84.51 E-value: 5.25e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622896528 67 PRVDTVDCDGLDLR-VFPDNI---TRATQHLSLQNNQLQelpyNELSR--LSGLRTLNLHNNLISSEgLPDE--AFESLT 138
Cdd:PLN00113 93 PYIQTINLSNNQLSgPIPDDIfttSSSLRYLNLSNNNFT----GSIPRgsIPNLETLDLSNNMLSGE-IPNDigSFSSLK 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622896528 139 QLQ---HIYVAHNKLSVAPQflpRSLRVADLAANQVMEIFPLTFGEKPALRSVYLHNNQLSnaGLPPDAFRGSEAVTTLS 215
Cdd:PLN00113 168 VLDlggNVLVGKIPNSLTNL---TSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLS--GEIPYEIGGLTSLNHLD 242
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622896528 216 LS-NNRFSYLPPSLP--SSLERLHL-QNNLISKVPRGALSRQtQLRELYLQHNQLtdSGLDATTFSKLHSLEYLDLSHNQ 291
Cdd:PLN00113 243 LVyNNLTGPIPSSLGnlKNLQYLFLyQNKLSGPIPPSIFSLQ-KLISLDLSDNSL--SGEIPELVIQLQNLEILHLFSNN 319
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622896528 292 LT-TVPAG---LPRtLAILHLGRNRIRQVEAARLHGARGLRYLLLQHNQLgSSGLPAGaLRPLRGLHTLHLYGNGLD-RV 366
Cdd:PLN00113 320 FTgKIPVAltsLPR-LQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNL-TGEIPEG-LCSSGNLFKLILFSNSLEgEI 396
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622896528 367 P--LALPRRLCALVLPHNHVATLGARELAATPGLMELNLAYNRLtSARVHHRAFrRLRTLRSLDLAGNqltRLPMGLP-- 442
Cdd:PLN00113 397 PksLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNL-QGRINSRKW-DMPSLQMLSLARN---KFFGGLPds 471
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622896528 443 ---TGLHTLRLQRNQLRMLEPEPLTGLDQLKELSLAHNRLRvGDIGP--GTWHELQALQVRHRLVSHTIP 507
Cdd:PLN00113 472 fgsKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLS-GEIPDelSSCKKLVSLDLSHNQLSGQIP 540
|
|
| PRK15370 |
PRK15370 |
type III secretion system effector E3 ubiquitin transferase SlrP; |
212-479 |
5.48e-17 |
|
type III secretion system effector E3 ubiquitin transferase SlrP;
Pssm-ID: 185268 [Multi-domain] Cd Length: 754 Bit Score: 84.36 E-value: 5.48e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622896528 212 TTLSLSNNRFSYLPPSLPSSLERLHLQNNLISKVPRgalSRQTQLRELYLQHNQLTdsgldattfsklhsleyldlshnq 291
Cdd:PRK15370 181 TELRLKILGLTTIPACIPEQITTLILDNNELKSLPE---NLQGNIKTLYANSNQLT------------------------ 233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622896528 292 ltTVPAGLPRTLAILHLGRNRIRQVeAARLHGArgLRYLLLQHNQLgsSGLPAGAlrPlRGLHTLHLYGNGLDRVPLALP 371
Cdd:PRK15370 234 --SIPATLPDTIQEMELSINRITEL-PERLPSA--LQSLDLFHNKI--SCLPENL--P-EELRYLSVYDNSIRTLPAHLP 303
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622896528 372 RRLCALVLPHNHVATLGArelAATPGLMELNLAYNRLTSARVHHRAfrrlrTLRSLDLAGNQLTRLPMGLPTGLHTLRLQ 451
Cdd:PRK15370 304 SGITHLNVQSNSLTALPE---TLPPGLKTLEAGENALTSLPASLPP-----ELQVLDVSKNQITVLPETLPPTITTLDVS 375
|
250 260
....*....|....*....|....*...
gi 1622896528 452 RNQLRMLePEPLTGldQLKELSLAHNRL 479
Cdd:PRK15370 376 RNALTNL-PENLPA--ALQIMQASRNNL 400
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
71-308 |
3.18e-16 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 80.75 E-value: 3.18e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622896528 71 TVDCDGLDLRVFPDNITRAT--QHLSLQNNQLQELPyNELSRLSGLRTLNLHNNLISSegLPDEaFESLTQLQHIYVAHN 148
Cdd:COG4886 140 ELDLSNNQLTDLPEPLGNLTnlKSLDLSNNQLTDLP-EELGNLTNLKELDLSNNQITD--LPEP-LGNLTNLEELDLSGN 215
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622896528 149 KLSVAPQFLPR--SLRVADLAANQVMEIFPLtfGEKPALRSVYLHNNQLSNagLPPDAfrGSEAVTTLSLSNNRFSYL-- 224
Cdd:COG4886 216 QLTDLPEPLANltNLETLDLSNNQLTDLPEL--GNLTNLEELDLSNNQLTD--LPPLA--NLTNLKTLDLSNNQLTDLkl 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622896528 225 ----PPSLPSSLERLHLQNNLISKVPRGALSRQTQLRELYLQHNQLTDSGLDATTFSKLHSLEYLDLSHNQLTTVPAGLP 300
Cdd:COG4886 290 keleLLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLLLTLLLTL 369
|
....*...
gi 1622896528 301 RTLAILHL 308
Cdd:COG4886 370 GLLGLLEA 377
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
211-438 |
1.19e-15 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 75.98 E-value: 1.19e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622896528 211 VTTLSLSNNRFSYLP-PSLPSSLERLHLQNNLISKVPrgALSRQTQLRELYLQHNQLTdsgldattfsklhSLEYLDlsh 289
Cdd:cd21340 4 ITHLYLNDKNITKIDnLSLCKNLKVLYLYDNKITKIE--NLEFLTNLTHLYLQNNQIE-------------KIENLE--- 65
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622896528 290 nqlttvpaGLPRtLAILHLGRNRIRQVEAarLHGARGLRYLLLQHNQLGSsglpagalrplrglhtlhlyGNGL---DRV 366
Cdd:cd21340 66 --------NLVN-LKKLYLGGNRISVVEG--LENLTNLEELHIENQRLPP--------------------GEKLtfdPRS 114
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1622896528 367 PLALPRRLCALVLPHNHVATLgaRELAATPGLMELNLAYNRLTSARVHHRAFRRLRTLRSLDLAGNQLTRLP 438
Cdd:cd21340 115 LAALSNSLRVLNISGNNIDSL--EPLAPLRNLEQLDASNNQISDLEELLDLLSSWPSLRELDLTGNPVCKKP 184
|
|
| RNA1 |
COG5238 |
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ... |
183-495 |
7.15e-14 |
|
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ribosomal structure and biogenesis];
Pssm-ID: 444072 [Multi-domain] Cd Length: 434 Bit Score: 73.67 E-value: 7.15e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622896528 183 PALRSVYLHNNQLSNaGLPPDAFRGSEAVTTLSLSNNRFSYLPPSlpsslerlhlqnNLISKVPRGALSRQTQLRelYLQ 262
Cdd:COG5238 98 EEVSPVALAETATAV-ATPPPDLRRIMAKTLEDSLILYLALPRRI------------NLIQVLKDPLGGNAVHLL--GLA 162
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622896528 263 HNQLTDSGLDATTFSKLHSLEYLDLSHNQLTTVPA-------GLPRTLAILHLGRNRI--RQVE--AARLHGARGLRYLL 331
Cdd:COG5238 163 ARLGLLAAISMAKALQNNSVETVYLGCNQIGDEGIeelaealTQNTTVTTLWLKRNPIgdEGAEilAEALKGNKSLTTLD 242
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622896528 332 LQHNQLGSSGLP--AGALRPLRGLHTLHLYGN-----GLDRVPLALPRR--LCALVLPHNHVATLGARELA----ATPGL 398
Cdd:COG5238 243 LSNNQIGDEGVIalAEALKNNTTVETLYLSGNqigaeGAIALAKALQGNttLTSLDLSVNRIGDEGAIALAeglqGNKTL 322
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622896528 399 MELNLAYNRLTS--ARVHHRAFRRLRTLRSLDLAGNQLT--------RLPMGLPTgLHTLRLQRNQLRMLEPEPLtgLDQ 468
Cdd:COG5238 323 HTLNLAYNGIGAqgAIALAKALQENTTLHSLDLSDNQIGdegaialaKYLEGNTT-LRELNLGKNNIGKQGAEAL--IDA 399
|
330 340
....*....|....*....|....*..
gi 1622896528 469 LKELSLAHNRLRVGDIGPGTWHELQAL 495
Cdd:COG5238 400 LQTNRLHTLILDGNLIGAEAQQRLEQL 426
|
|
| PRK15387 |
PRK15387 |
type III secretion system effector E3 ubiquitin transferase SspH2; |
192-479 |
3.24e-12 |
|
type III secretion system effector E3 ubiquitin transferase SspH2;
Pssm-ID: 185285 [Multi-domain] Cd Length: 788 Bit Score: 69.42 E-value: 3.24e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622896528 192 NNQLSNAGLPPDafrgseaVTTLSLSNNRFSYLPpSLPSSLERLHLQNNLISKVPrgalSRQTQLRELYLQHNQLTDSGL 271
Cdd:PRK15387 232 NNLTSLPALPPE-------LRTLEVSGNQLTSLP-VLPPGLLELSIFSNPLTHLP----ALPSGLCKLWIFGNQLTSLPV 299
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622896528 272 DATtfsklhSLEYLDLSHNQLTTVPAgLPRTLAILHLGRNRIRQVEAArlhgARGLRYLLLQHNQLGS-SGLPAGalrpl 350
Cdd:PRK15387 300 LPP------GLQELSVSDNQLASLPA-LPSELCKLWAYNNQLTSLPTL----PSGLQELSVSDNQLASlPTLPSE----- 363
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622896528 351 rgLHTLHLYGNGLDRVPlALPRrlcalvlphnhvatlgarelaatpGLMELNLAYNRLTSARVHHRAfrrlrtLRSLDLA 430
Cdd:PRK15387 364 --LYKLWAYNNRLTSLP-ALPS------------------------GLKELIVSGNRLTSLPVLPSE------LKELMVS 410
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 1622896528 431 GNQLTRLPMgLPTGLHTLRLQRNQLRMLePEPLTGLDQLKELSLAHNRL 479
Cdd:PRK15387 411 GNRLTSLPM-LPSGLLSLSVYRNQLTRL-PESLIHLSSETTVNLEGNPL 457
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
92-361 |
1.09e-10 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 61.34 E-value: 1.09e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622896528 92 HLSLQNNQLQELPynELSRLSGLRTLNLHNNLISS-EGLpdeafESLTQLQHiyvahnklsvapqflprslrvadlaanq 170
Cdd:cd21340 6 HLYLNDKNITKID--NLSLCKNLKVLYLYDNKITKiENL-----EFLTNLTH---------------------------- 50
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622896528 171 vmeifpltfgekpalrsVYLHNNQLSnaglppdafrgseavttlSLSNnrFSYLPpslpsSLERLHLQNNLISKVprGAL 250
Cdd:cd21340 51 -----------------LYLQNNQIE------------------KIEN--LENLV-----NLKKLYLGGNRISVV--EGL 86
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622896528 251 SRQTQLRELYLQHNQLtDSGL-----DATTFSKLHSLEYLDLSHNQLTTVpaglpRTLAILHlgrnrirqveaarlhgar 325
Cdd:cd21340 87 ENLTNLEELHIENQRL-PPGEkltfdPRSLAALSNSLRVLNISGNNIDSL-----EPLAPLR------------------ 142
|
250 260 270
....*....|....*....|....*....|....*.
gi 1622896528 326 GLRYLLLQHNQLGSSGLPAGALRPLRGLHTLHLYGN 361
Cdd:cd21340 143 NLEQLDASNNQISDLEELLDLLSSWPSLRELDLTGN 178
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
230-292 |
2.11e-10 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 56.38 E-value: 2.11e-10
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1622896528 230 SSLERLHLQNNLISKVPRGALSRQTQLRELYLQHNQLTdsGLDATTFSKLHSLEYLDLSHNQL 292
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLT--TLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| LRR_RI |
cd00116 |
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ... |
88-341 |
2.06e-09 |
|
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Pssm-ID: 238064 [Multi-domain] Cd Length: 319 Bit Score: 58.91 E-value: 2.06e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622896528 88 RATQHLSLQNNQLQELPYN------ELSRLSGLRTLNLHNNLISSEGLPdeAFESLTQ---LQHIYVAHNKLSVAP-QFL 157
Cdd:cd00116 51 PSLKELCLSLNETGRIPRGlqsllqGLTKGCGLQELDLSDNALGPDGCG--VLESLLRsssLQELKLNNNGLGDRGlRLL 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622896528 158 PRSLRvaDLaanqvmeifpltfgeKPALRSVYLHNNQLSNAGLPP--DAFRGSEAVTTLSLSNNrfsylppslpsslerl 235
Cdd:cd00116 129 AKGLK--DL---------------PPALEKLVLGRNRLEGASCEAlaKALRANRDLKELNLANN---------------- 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622896528 236 HLQNNLISKVPRGaLSRQTQLRELYLQHNQLTDSG--LDATTFSKLHSLEYLDLSHNQLTTVPAglpRTLAilhlgrnri 313
Cdd:cd00116 176 GIGDAGIRALAEG-LKANCNLEVLDLNNNGLTDEGasALAETLASLKSLEVLNLGDNNLTDAGA---AALA--------- 242
|
250 260
....*....|....*....|....*...
gi 1622896528 314 rqveAARLHGARGLRYLLLQHNQLGSSG 341
Cdd:cd00116 243 ----SALLSPNISLLTLSLSCNDITDDG 266
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
65-283 |
3.47e-09 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 58.79 E-value: 3.47e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622896528 65 SCPRVDTVDCDGLDLRVFPDNITRAT--QHLSLQNNQLQELPyNELSRLSGLRTLNLHNNLISSegLPDeaFESLTQLQH 142
Cdd:COG4886 180 NLTNLKELDLSNNQITDLPEPLGNLTnlEELDLSGNQLTDLP-EPLANLTNLETLDLSNNQLTD--LPE--LGNLTNLEE 254
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622896528 143 IYVAHNKLSVAPQFLP-RSLRVADLAANQVMEIFPLTFGEKPALRSVYLHNNQLSNAGLPPDAFRGSEAVTTLSLSNNRF 221
Cdd:COG4886 255 LDLSNNQLTDLPPLANlTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLL 334
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1622896528 222 SYLPPSLPSSLERLHLQNNLISKVPRGALSRQTQLRELYLQHNQLTDSGLDATTFSKLHSLE 283
Cdd:COG4886 335 VTLTTLALSLSLLALLTLLLLLNLLSLLLTLLLTLGLLGLLEATLLTLALLLLTLLLLLLTT 396
|
|
| RNA1 |
COG5238 |
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ... |
104-363 |
1.01e-08 |
|
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ribosomal structure and biogenesis];
Pssm-ID: 444072 [Multi-domain] Cd Length: 434 Bit Score: 57.49 E-value: 1.01e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622896528 104 PYNELSRLSGLRTLNLHNNLISSEGLP-DEAFESLTQLqhiyvahnkLSVAPQFLPRSLRVADLAANQVMEIFPLTFGE- 181
Cdd:COG5238 133 LYLALPRRINLIQVLKDPLGGNAVHLLgLAARLGLLAA---------ISMAKALQNNSVETVYLGCNQIGDEGIEELAEa 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622896528 182 ---KPALRSVYLHNNQLSNAGLP--PDAFRGSEAVTTLSLSNNR-----FSYLPPSL--PSSLERLHLQNNLIS----KV 245
Cdd:COG5238 204 ltqNTTVTTLWLKRNPIGDEGAEilAEALKGNKSLTTLDLSNNQigdegVIALAEALknNTTVETLYLSGNQIGaegaIA 283
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622896528 246 PRGALSRQTQLRELYLQHNQLTDSGldATTFSKLhsleyldLSHNQlttvpaglprTLAILHLGRNRIRQVEAARLHGA- 324
Cdd:COG5238 284 LAKALQGNTTLTSLDLSVNRIGDEG--AIALAEG-------LQGNK----------TLHTLNLAYNGIGAQGAIALAKAl 344
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 1622896528 325 ---RGLRYLLLQHNQLGSSG--LPAGALRPLRGLHTLHLYGNGL 363
Cdd:COG5238 345 qenTTLHSLDLSDNQIGDEGaiALAKYLEGNTTLRELNLGKNNI 388
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
92-247 |
1.14e-08 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 55.56 E-value: 1.14e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622896528 92 HLSLQNNQLQELPYneLSRLSGLRTLNLHNNLISS-EGLpdeafESLTQLQHIYVAHNKLSVAPQFL--PRS-------L 161
Cdd:cd21340 50 HLYLQNNQIEKIEN--LENLVNLKKLYLGGNRISVvEGL-----ENLTNLEELHIENQRLPPGEKLTfdPRSlaalsnsL 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622896528 162 RVADLAANQVMEIFPLtfGEKPALRSVYLHNNQLSNAglppdafrgSEAVTTLSlsnnrfsylppSLPsSLERLHLQNNL 241
Cdd:cd21340 123 RVLNISGNNIDSLEPL--APLRNLEQLDASNNQISDL---------EELLDLLS-----------SWP-SLRELDLTGNP 179
|
....*.
gi 1622896528 242 ISKVPR 247
Cdd:cd21340 180 VCKKPK 185
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
254-313 |
6.53e-08 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 49.45 E-value: 6.53e-08
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1622896528 254 TQLRELYLQHNQLTDsgLDATTFSKLHSLEYLDLSHNQLTTVP----AGLPRtLAILHLGRNRI 313
Cdd:pfam13855 1 PNLRSLDLSNNRLTS--LDDGAFKGLSNLKVLDLSNNLLTTLSpgafSGLPS-LRYLDLSGNRL 61
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
91-150 |
1.36e-06 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 45.59 E-value: 1.36e-06
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622896528 91 QHLSLQNNQLQELPYNELSRLSGLRTLNLHNNLISSegLPDEAFESLTQLQHIYVAHNKL 150
Cdd:pfam13855 4 RSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTT--LSPGAFSGLPSLRYLDLSGNRL 61
|
|
| PRK15387 |
PRK15387 |
type III secretion system effector E3 ubiquitin transferase SspH2; |
121-376 |
2.61e-06 |
|
type III secretion system effector E3 ubiquitin transferase SspH2;
Pssm-ID: 185285 [Multi-domain] Cd Length: 788 Bit Score: 50.16 E-value: 2.61e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622896528 121 NNLISSEGLPDEafesltqLQHIYVAHNKLSVAPQFLPRSLRVAdlaanqvmeIFPLTFGEKPALRS----VYLHNNQLS 196
Cdd:PRK15387 232 NNLTSLPALPPE-------LRTLEVSGNQLTSLPVLPPGLLELS---------IFSNPLTHLPALPSglckLWIFGNQLT 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622896528 197 NAG-LPPdafrgseAVTTLSLSNNRFSYLP-------------------PSLPSSLERLHLQNNLISKVPrgalSRQTQL 256
Cdd:PRK15387 296 SLPvLPP-------GLQELSVSDNQLASLPalpselcklwaynnqltslPTLPSGLQELSVSDNQLASLP----TLPSEL 364
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622896528 257 RELYLQHNQLtdsgldaTTFSKLHS-LEYLDLSHNQLTTVPAgLPRTLAILHLGRNRIRQVEAArlhgARGLRYLLLQHN 335
Cdd:PRK15387 365 YKLWAYNNRL-------TSLPALPSgLKELIVSGNRLTSLPV-LPSELKELMVSGNRLTSLPML----PSGLLSLSVYRN 432
|
250 260 270 280
....*....|....*....|....*....|....*....|.
gi 1622896528 336 QLgsSGLPAgALRPLRGLHTLHLYGNGLDRVPLALPRRLCA 376
Cdd:PRK15387 433 QL--TRLPE-SLIHLSSETTVNLEGNPLSERTLQALREITS 470
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
211-266 |
3.64e-06 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 44.44 E-value: 3.64e-06
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*....
gi 1622896528 211 VTTLSLSNNRFSYLPPSL---PSSLERLHLQNNLISKVPRGALSRQTQLRELYLQHNQL 266
Cdd:pfam13855 3 LRSLDLSNNRLTSLDDGAfkgLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
422-479 |
4.01e-06 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 44.44 E-value: 4.01e-06
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1622896528 422 RTLRSLDLAGNQLTRLPMGLPTGLHTLR---LQRNQLRMLEPEPLTGLDQLKELSLAHNRL 479
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKvldLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
91-231 |
4.29e-06 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 49.85 E-value: 4.29e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622896528 91 QHLSL-QNNQLQELPynELSRLSGLRTLNLHNNLISseGLPDEAFESLTQLQHIYVAHNKLS-VAPQFLP--RSLRVADL 166
Cdd:PLN00113 455 QMLSLaRNKFFGGLP--DSFGSKRLENLDLSRNQFS--GAVPRKLGSLSELMQLKLSENKLSgEIPDELSscKKLVSLDL 530
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1622896528 167 AANQVMEIFPLTFGEKPALRSVYLHNNQLSnaGLPPDAFRGSEAVTTLSLSNNRFSylpPSLPSS 231
Cdd:PLN00113 531 SHNQLSGQIPASFSEMPVLSQLDLSQNQLS--GEIPKNLGNVESLVQVNISHNHLH---GSLPST 590
|
|
| RNA1 |
COG5238 |
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ... |
108-293 |
4.84e-06 |
|
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ribosomal structure and biogenesis];
Pssm-ID: 444072 [Multi-domain] Cd Length: 434 Bit Score: 49.02 E-value: 4.84e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622896528 108 LSRLSGLRTLNLHNNLISSEGLPD--EAFESLTQLQHIYVAHNKLSVapqflPRSLRVADLAANQvmeifpltfgekPAL 185
Cdd:COG5238 232 LKGNKSLTTLDLSNNQIGDEGVIAlaEALKNNTTVETLYLSGNQIGA-----EGAIALAKALQGN------------TTL 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622896528 186 RSVYLHNNQLSNAGLPP--DAFRGSEAVTTLSLSNNRFS-----YLPPSLP--SSLERLHLQNNLIS----KVPRGALSR 252
Cdd:COG5238 295 TSLDLSVNRIGDEGAIAlaEGLQGNKTLHTLNLAYNGIGaqgaiALAKALQenTTLHSLDLSDNQIGdegaIALAKYLEG 374
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 1622896528 253 QTQLRELYLQHNQLTDSG----LDATTFSKLHsleYLDLSHNQLT 293
Cdd:COG5238 375 NTTLRELNLGKNNIGKQGaealIDALQTNRLH---TLILDGNLIG 416
|
|
| LRR_RI |
cd00116 |
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ... |
215-479 |
1.06e-05 |
|
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Pssm-ID: 238064 [Multi-domain] Cd Length: 319 Bit Score: 47.74 E-value: 1.06e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622896528 215 SLSNNRFSYLPPSL--PSSLERLHLQNNLISKVPRG------ALSRQTQLRELYLQHNQLTDSGldATTFSKLH---SLE 283
Cdd:cd00116 34 TLGEEAAKALASALrpQPSLKELCLSLNETGRIPRGlqsllqGLTKGCGLQELDLSDNALGPDG--CGVLESLLrssSLQ 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622896528 284 YLDLSHNQLttvpaglprtlailhlGRNRIRQVEAARLHGARGLRYLLLQHNQLGSSGLP--AGALRPLRGLHTLHLYGN 361
Cdd:cd00116 112 ELKLNNNGL----------------GDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEalAKALRANRDLKELNLANN 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622896528 362 GLdRVPLAlpRRLCalvlphnhvatlgaRELAATPGLMELNLAYNRLTS--ARVHHRAFRRLRTLRSLDLAGNQLTRLPM 439
Cdd:cd00116 176 GI-GDAGI--RALA--------------EGLKANCNLEVLDLNNNGLTDegASALAETLASLKSLEVLNLGDNNLTDAGA 238
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 1622896528 440 -----GLPTGLHTLR---LQRNQLR----MLEPEPLTGLDQLKELSLAHNRL 479
Cdd:cd00116 239 aalasALLSPNISLLtlsLSCNDITddgaKDLAEVLAEKESLLELDLRGNKF 290
|
|
| PRK15387 |
PRK15387 |
type III secretion system effector E3 ubiquitin transferase SspH2; |
352-498 |
2.32e-05 |
|
type III secretion system effector E3 ubiquitin transferase SspH2;
Pssm-ID: 185285 [Multi-domain] Cd Length: 788 Bit Score: 47.08 E-value: 2.32e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622896528 352 GLHTLHLYGNGLDRVPLALPRRLCALVLPHNHVATLGA-----RELAAT-----------PGLMELNLAYNRLTsarvHH 415
Cdd:PRK15387 202 GNAVLNVGESGLTTLPDCLPAHITTLVIPDNNLTSLPAlppelRTLEVSgnqltslpvlpPGLLELSIFSNPLT----HL 277
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622896528 416 RAFRrlRTLRSLDLAGNQLTRLPMgLPTGLHTLRLQRNQLRMLEPEP------------LTGL----DQLKELSLAHNRL 479
Cdd:PRK15387 278 PALP--SGLCKLWIFGNQLTSLPV-LPPGLQELSVSDNQLASLPALPselcklwaynnqLTSLptlpSGLQELSVSDNQL 354
|
170
....*....|....*....
gi 1622896528 480 RVGDIGPGTWHELQALQVR 498
Cdd:PRK15387 355 ASLPTLPSELYKLWAYNNR 373
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
183-242 |
2.62e-05 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 42.13 E-value: 2.62e-05
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1622896528 183 PALRSVYLHNNQLSNagLPPDAFRGSEAVTTLSLSNNRFSYLPP---SLPSSLERLHLQNNLI 242
Cdd:pfam13855 1 PNLRSLDLSNNRLTS--LDDGAFKGLSNLKVLDLSNNLLTTLSPgafSGLPSLRYLDLSGNRL 61
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
372-434 |
4.23e-05 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 41.36 E-value: 4.23e-05
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1622896528 372 RRLCALVLPHNHVATLGARELAATPGLMELNLAYNRLTSarVHHRAFRRLRTLRSLDLAGNQL 434
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTT--LSPGAFSGLPSLRYLDLSGNRL 61
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
112-195 |
2.04e-04 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 39.43 E-value: 2.04e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622896528 112 SGLRTLNLHNNLISSegLPDEAFESLTQLQHIYVAHNKLSVapqflprslrvadlaanqvmeIFPLTFGEKPALRSVYLH 191
Cdd:pfam13855 1 PNLRSLDLSNNRLTS--LDDGAFKGLSNLKVLDLSNNLLTT---------------------LSPGAFSGLPSLRYLDLS 57
|
....
gi 1622896528 192 NNQL 195
Cdd:pfam13855 58 GNRL 61
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
443-496 |
2.63e-04 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 39.04 E-value: 2.63e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....
gi 1622896528 443 TGLHTLRLQRNQLRMLEPEPLTGLDQLKELSLAHNRLRVgdIGPGTWHELQALQ 496
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTT--LSPGAFSGLPSLR 52
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
269-529 |
3.68e-04 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 43.30 E-value: 3.68e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622896528 269 SGLDATTFSKLHSLEYLDLSHNQLTtvpAGLPRTLAILhlgrnrirqveaarlhgARGLRYLLLQHNQLGSSgLPAGALR 348
Cdd:PLN00113 82 SGKISSAIFRLPYIQTINLSNNQLS---GPIPDDIFTT-----------------SSSLRYLNLSNNNFTGS-IPRGSIP 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622896528 349 PLR---------------------GLHTLHLYGNGL-DRVPLALPR--RLCALVLPHNHVATLGARELAATPGLMELNLA 404
Cdd:PLN00113 141 NLEtldlsnnmlsgeipndigsfsSLKVLDLGGNVLvGKIPNSLTNltSLEFLTLASNQLVGQIPRELGQMKSLKWIYLG 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622896528 405 YNRLtSARVHHRaFRRLRTLRSLDLAGNQLT-RLP--MGLPTGLHTLRLQRNQLRMLEPEPLTGLDQLKELSLAHNRLRv 481
Cdd:PLN00113 221 YNNL-SGEIPYE-IGGLTSLNHLDLVYNNLTgPIPssLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLS- 297
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 1622896528 482 GDIgPGTWHELQALQVRHRLVSH---TIPRASPS-PCLHchipnILVSWSSN 529
Cdd:PLN00113 298 GEI-PELVIQLQNLEILHLFSNNftgKIPVALTSlPRLQ-----VLQLWSNK 343
|
|
| LRR_4 |
pfam12799 |
Leucine Rich repeats (2 copies); Leucine rich repeats are short sequence motifs present in a ... |
254-294 |
6.00e-04 |
|
Leucine Rich repeats (2 copies); Leucine rich repeats are short sequence motifs present in a number of proteins with diverse functions and cellular locations. These repeats are usually involved in protein-protein interactions. Each Leucine Rich Repeat is composed of a beta-alpha unit. These units form elongated non-globular structures. Leucine Rich Repeats are often flanked by cysteine rich domains.
Pssm-ID: 463713 [Multi-domain] Cd Length: 44 Bit Score: 37.61 E-value: 6.00e-04
10 20 30 40
....*....|....*....|....*....|....*....|.
gi 1622896528 254 TQLRELYLQHNQLTDSGLdattFSKLHSLEYLDLSHNQLTT 294
Cdd:pfam12799 1 PNLEVLDLSNNQITDIPP----LAKLPNLETLDLSGNNKIT 37
|
|
| PRK15387 |
PRK15387 |
type III secretion system effector E3 ubiquitin transferase SspH2; |
91-309 |
6.74e-04 |
|
type III secretion system effector E3 ubiquitin transferase SspH2;
Pssm-ID: 185285 [Multi-domain] Cd Length: 788 Bit Score: 42.46 E-value: 6.74e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622896528 91 QHLSLQNNQLQELPY--NELSRLSGlrtlnLHNNLISSEGLPdeafeslTQLQHIYVAHNKLSVAPQfLPRSLRVADLAA 168
Cdd:PRK15387 305 QELSVSDNQLASLPAlpSELCKLWA-----YNNQLTSLPTLP-------SGLQELSVSDNQLASLPT-LPSELYKLWAYN 371
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622896528 169 NQVMEIFPLTFGekpaLRSVYLHNNQLSNAGLPPDAFRgseavtTLSLSNNRFSYLpPSLPSSLERLHLQNNLISKVPRG 248
Cdd:PRK15387 372 NRLTSLPALPSG----LKELIVSGNRLTSLPVLPSELK------ELMVSGNRLTSL-PMLPSGLLSLSVYRNQLTRLPES 440
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1622896528 249 A--LSRQTQLRelyLQHNQLTDSGLDAttFSKLHSLEYLDLSHNQLTTVPAGLPRTLAILHLG 309
Cdd:PRK15387 441 LihLSSETTVN---LEGNPLSERTLQA--LREITSAPGYSGPIIRFDMAGASAPRETRALHLA 498
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
301-363 |
8.41e-04 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 37.89 E-value: 8.41e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1622896528 301 RTLAILHLGRNRIRQVEAARLHGARGLRYLLLQHNQLgsSGLPAGALRPLRGLHTLHLYGNGL 363
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLL--TTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
159-221 |
1.36e-03 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 37.12 E-value: 1.36e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1622896528 159 RSLRVADLAANQVMEIFPLTFGEKPALRSVYLHNNQLSnaGLPPDAFRGSEAVTTLSLSNNRF 221
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLT--TLSPGAFSGLPSLRYLDLSGNRL 61
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