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    L3HYPDH trans-L-3-hydroxyproline dehydratase [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 702076, updated on 17-Aug-2024

    Summary

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    Official Symbol
    L3HYPDHprovided by VGNC
    Official Full Name
    trans-L-3-hydroxyproline dehydrataseprovided by VGNC
    Primary source
    VGNC:VGNC:74089
    See related
    Ensembl:ENSMMUG00000008717
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See L3HYPDH in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 7 NC_041760.1 (121553246..121584407, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 7 NC_027899.1 (121437124..121466119, complement)

    Chromosome 7 - NC_041760.1Genomic Context describing neighboring genes Neighboring gene aldose reductase pseudogene Neighboring gene dishevelled associated activator of morphogenesis 1 Neighboring gene G protein-coupled receptor 135 Neighboring gene JNK1/MAPK8 associated membrane protein Neighboring gene coiled-coil domain containing 175 Neighboring gene reticulon 1 Neighboring gene 40S ribosomal protein S4, X isoform-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables hydro-lyase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    trans-3-hydroxy-L-proline dehydratase
    Names
    putative proline racemase

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041760.1 Reference Mmul_10 Primary Assembly

      Range
      121553246..121584407 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001094065.4 → XP_001094065.2  trans-3-hydroxy-L-proline dehydratase isoform X1

      UniProtKB/TrEMBL
      A0A1D5QWA4, H9F5H4
      Related
      ENSMMUP00000052334.2, ENSMMUT00000070764.2
      Conserved Domains (1) summary
      pfam05544
      Location:22 → 352
      Pro_racemase; Proline racemase

    2. XM_028851577.1 → XP_028707410.1  trans-3-hydroxy-L-proline dehydratase isoform X2

      Conserved Domains (1) summary
      pfam05544
      Location:1 → 181
      Pro_racemase; Proline racemase

    RNA

    1. XR_003731599.1 RNA Sequence

    2. XR_003731600.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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