TSPAN17 tetraspanin 17 [Macaca mulatta (Rhesus monkey)] - Gene

Summary

Official Symbol: TSPAN17provided by VGNC
Official Full Name: tetraspanin 17provided by VGNC
Primary source: VGNC:VGNC:78932
See related: Ensembl:ENSMMUG00000000144
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Macaca mulatta
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 6

Exon count:: 9

Annotation release	Status	Assembly	Chr	Location
103	current	Mmul_10 (GCF_003339765.1)	6	NC_041759.1 (174106675..174118432)
102	previous assembly	Mmul_8.0.1 (GCF_000772875.2)	6	NC_027898.1 (175115184..175126952)

Chromosome 6 - NC_041759.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by RefSeq

Process	Evidence Code	Pubs
involved_in protein localization to plasma membrane	IEA Inferred from Electronic Annotation more info	PubMed
involved_in protein maturation	IEA Inferred from Electronic Annotation more info	PubMed
involved_in regulation of vascular endothelial growth factor signaling pathway	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in membrane	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: tetraspanin-17

NP_001248457.1

EC 3.6.5.3

XP_014996954.1

EC 3.6.5.3

XP_028704952.1

EC 3.6.5.3

XP_028704953.1

EC 3.6.5.3

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001261528.1 → NP_001248457.1 tetraspanin-17

See identical proteins and their annotated locations for NP_001248457.1

Status: PROVISIONAL

Source sequence(s)

JV046729

UniProtKB/TrEMBL

A0A5K1UFU8, F7HM13, I0FQS4

Related

ENSMMUP00000000201.4, ENSMMUT00000000214.4

Conserved Domains (1) summary

cd03159
Location:115 → 235

TM4SF9_like_LEL; Tetraspanin, extracellular domain or large extracellular loop (LEL), TM4SF9_like subfamily. Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment ...

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

NC_041759.1 Reference Mmul_10 Primary Assembly

Range

174106675..174118432

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_015141468.2 → XP_014996954.1 tetraspanin-17 isoform X2

UniProtKB/TrEMBL

A0A5K1UFU8

Conserved Domains (1) summary

cd03159
Location:115 → 238

TM4SF9_like_LEL; Tetraspanin, extracellular domain or large extracellular loop (LEL), TM4SF9_like subfamily. Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment ...
XM_028849119.1 → XP_028704952.1 tetraspanin-17 isoform X1

UniProtKB/TrEMBL

A0A5K1UFU8

Conserved Domains (1) summary

cd03159
Location:115 → 235

TM4SF9_like_LEL; Tetraspanin, extracellular domain or large extracellular loop (LEL), TM4SF9_like subfamily. Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment ...
XM_028849120.1 → XP_028704953.1 tetraspanin-17 isoform X3

Conserved Domains (1) summary

cd03159
Location:77 → 181

TM4SF9_like_LEL; Tetraspanin, extracellular domain or large extracellular loop (LEL), TM4SF9_like subfamily. Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment ...