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    OFD1 OFD1 centriole and centriolar satellite protein [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 711677, updated on 17-Aug-2024

    Summary

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    Official Symbol
    OFD1provided by VGNC
    Official Full Name
    OFD1 centriole and centriolar satellite proteinprovided by VGNC
    Primary source
    VGNC:VGNC:75460
    See related
    Ensembl:ENSMMUG00000019410
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See OFD1 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    24
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) X NC_041774.1 (13394988..13429443)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) X NC_027913.1 (12952512..12987098)

    Chromosome X - NC_041774.1Genomic Context describing neighboring genes Neighboring gene RAB9A, member RAS oncogene family Neighboring gene trafficking protein particle complex subunit 2 Neighboring gene uncharacterized LOC114675102 Neighboring gene glycoprotein M6B Neighboring gene gem nuclear organelle associated protein 8

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in epithelial cilium movement involved in determination of left/right asymmetry IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in centrosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in ciliary basal body IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    oral-facial-digital syndrome 1 protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041774.1 Reference Mmul_10 Primary Assembly

      Range
      13394988..13429443
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001098347.4 → XP_001098347.2  oral-facial-digital syndrome 1 protein isoform X1

      UniProtKB/TrEMBL
      F6RGG6, G7MKT8
      Related
      ENSMMUP00000025511.3, ENSMMUT00000027270.4
      Conserved Domains (2) summary
      pfam16045
      Location:75 → 101
      LisH_2
      pfam17380
      Location:189 → 535
      DUF5401; Family of unknown function (DUF5401)

    2. XM_028842492.1 → XP_028698325.1  oral-facial-digital syndrome 1 protein isoform X4

      UniProtKB/TrEMBL
      G7MKT8
      Conserved Domains (2) summary
      pfam16045
      Location:27 → 53
      LisH_2
      pfam17380
      Location:141 → 487
      DUF5401; Family of unknown function (DUF5401)

    3. XM_028842491.1 → XP_028698324.1  oral-facial-digital syndrome 1 protein isoform X2

      UniProtKB/TrEMBL
      G7MKT8
      Conserved Domains (2) summary
      pfam16045
      Location:69 → 95
      LisH_2
      pfam17380
      Location:183 → 529
      DUF5401; Family of unknown function (DUF5401)

    4. XM_001098244.4 → XP_001098244.2  oral-facial-digital syndrome 1 protein isoform X3

      UniProtKB/TrEMBL
      G7MKT8
      Conserved Domains (2) summary
      pfam16045
      Location:75 → 101
      LisH_2
      pfam17380
      Location:189 → 495
      DUF5401; Family of unknown function (DUF5401)

    5. XM_028842493.1 → XP_028698326.1  oral-facial-digital syndrome 1 protein isoform X5

      UniProtKB/TrEMBL
      G7MKT8
      Conserved Domains (1) summary
      pfam17380
      Location:82 → 428
      DUF5401; Family of unknown function (DUF5401)

    RNA

    1. XR_003726199.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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