SIX5 SIX homeobox 5 [Macaca mulatta (Rhesus monkey)] - Gene

Summary

Official Symbol: SIX5provided by VGNC
Official Full Name: SIX homeobox 5provided by VGNC
Primary source: VGNC:VGNC:112050
See related: Ensembl:ENSMMUG00000051573
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Macaca mulatta
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 19

Exon count:: 3

Annotation release	Status	Assembly	Chr	Location
103	current	Mmul_10 (GCF_003339765.1)	19	NC_041772.1 (45847542..45851669, complement)
102	previous assembly	Mmul_8.0.1 (GCF_000772875.2)	19	NC_027911.1 (41123138..41127265, complement)

Chromosome 19 - NC_041772.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific	IEA Inferred from Electronic Annotation more info	PubMed
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in regulation of transcription by RNA polymerase II	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in nucleus	IEA Inferred from Electronic Annotation more info	PubMed
part_of transcription regulator complex	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: homeobox protein SIX5

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001265752.1 → NP_001252681.1 homeobox protein SIX5

See identical proteins and their annotated locations for NP_001252681.1

Status: PROVISIONAL

Source sequence(s)

JV635971

UniProtKB/TrEMBL

A0A5F8AMB5, F7GEZ3

Related

ENSMMUP00000078967.1, ENSMMUT00000105521.1

Conserved Domains (2) summary

cd00086
Location:207 → 258

homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.

pfam16878
Location:87 → 196

SIX1_SD; Transcriptional regulator, SIX1, N-terminal SD domain