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    FAM163A family with sequence similarity 163 member A [ Homo sapiens (human) ]

    Gene ID: 148753, updated on 10-Dec-2024

    Summary

    Official Symbol
    FAM163Aprovided by HGNC
    Official Full Name
    family with sequence similarity 163 member Aprovided by HGNC
    Primary source
    HGNC:HGNC:28274
    See related
    Ensembl:ENSG00000143340 MIM:611727; AllianceGenome:HGNC:28274
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    NDSP; C1orf76
    Summary
    Predicted to be located in membrane. [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in testis (RPKM 5.6), adrenal (RPKM 3.7) and 9 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See FAM163A in Genome Data Viewer
    Location:
    1q25.2
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (179727776..179816198)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (179083538..179171949)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (179696911..179785333)

    Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2152 Neighboring gene ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 pseudogene Neighboring gene tudor domain containing 5 Neighboring gene uncharacterized LOC105371635 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2153 Neighboring gene uncharacterized LOC128071543 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:179713723-179714415 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:179757425-179757972 Neighboring gene ReSE screen-validated silencer GRCh37_chr1:179782229-179782454 Neighboring gene uncharacterized LOC105371634 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:179787655-179788640 Neighboring gene microRNA 12116 Neighboring gene uncharacterized LOC124904463 Neighboring gene long intergenic non-protein coding RNA 2818 Neighboring gene torsin 1A interacting protein 2 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2154

    Genomic regions, transcripts, and products

    Expression

    • Project title: Tissue-specific circular RNA induction during human fetal development
    • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
    • BioProject: PRJNA270632
    • Publication: PMID 26076956
    • Analysis date: Mon Apr 2 22:54:59 2018

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Interactions

    General gene information

    Clone Names

    • MGC16664

    Gene Ontology Provided by GOA

    Component Evidence Code Pubs
    located_in membrane  

    General protein information

    Preferred Names
    protein FAM163A
    Names
    cebelin
    neuroblastoma derived secretory protein

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001329712.2NP_001316641.1  protein FAM163A

      Status: VALIDATED

      Source sequence(s)
      BC009382, DB139576
      Consensus CDS
      CCDS1333.1
      UniProtKB/Swiss-Prot
      A8K8R7, Q96GL9
      Conserved Domains (1) summary
      pfam15069
      Location:1166
      FAM163; FAM163 family
    2. NM_001329713.2NP_001316642.1  protein FAM163A

      Status: VALIDATED

      Source sequence(s)
      AK292432, AL359853, BC009382, DB066264
      Consensus CDS
      CCDS1333.1
      UniProtKB/Swiss-Prot
      A8K8R7, Q96GL9
      Conserved Domains (1) summary
      pfam15069
      Location:1166
      FAM163; FAM163 family
    3. NM_001329714.2NP_001316643.1  protein FAM163A

      Status: VALIDATED

      Source sequence(s)
      BC009382, DB066264, DB089377
      Consensus CDS
      CCDS1333.1
      UniProtKB/Swiss-Prot
      A8K8R7, Q96GL9
      Conserved Domains (1) summary
      pfam15069
      Location:1166
      FAM163; FAM163 family
    4. NM_001329715.2NP_001316644.1  protein FAM163A

      Status: VALIDATED

      Source sequence(s)
      AL359853, BC009382, DB091482, HY036705
      Consensus CDS
      CCDS1333.1
      UniProtKB/Swiss-Prot
      A8K8R7, Q96GL9
      Conserved Domains (1) summary
      pfam15069
      Location:1166
      FAM163; FAM163 family
    5. NM_001329716.2NP_001316645.1  protein FAM163A

      Status: VALIDATED

      Source sequence(s)
      AL359853, BC009382, DB091482, HY036705
      Consensus CDS
      CCDS1333.1
      UniProtKB/Swiss-Prot
      A8K8R7, Q96GL9
      Conserved Domains (1) summary
      pfam15069
      Location:1166
      FAM163; FAM163 family
    6. NM_001329717.2NP_001316646.1  protein FAM163A

      Status: VALIDATED

      Source sequence(s)
      BC009382, DA416655
      Consensus CDS
      CCDS1333.1
      UniProtKB/Swiss-Prot
      A8K8R7, Q96GL9
      Conserved Domains (1) summary
      pfam15069
      Location:1166
      FAM163; FAM163 family
    7. NM_001329718.2NP_001316647.1  protein FAM163A

      Status: VALIDATED

      Source sequence(s)
      AK310711, AL359853, BC009382
      Consensus CDS
      CCDS1333.1
      UniProtKB/Swiss-Prot
      A8K8R7, Q96GL9
      Conserved Domains (1) summary
      pfam15069
      Location:1166
      FAM163; FAM163 family
    8. NM_001329719.2NP_001316648.1  protein FAM163A

      Status: VALIDATED

      Source sequence(s)
      AL359853, BC009382, DA402650
      Consensus CDS
      CCDS1333.1
      UniProtKB/Swiss-Prot
      A8K8R7, Q96GL9
      Conserved Domains (1) summary
      pfam15069
      Location:1166
      FAM163; FAM163 family
    9. NM_001393415.1NP_001380344.1  protein FAM163A

      Status: VALIDATED

      Source sequence(s)
      AL359853
      Consensus CDS
      CCDS1333.1
      UniProtKB/Swiss-Prot
      A8K8R7, Q96GL9
      Conserved Domains (1) summary
      pfam15069
      Location:1166
      FAM163; FAM163 family
    10. NM_001393416.1NP_001380345.1  protein FAM163A

      Status: VALIDATED

      Source sequence(s)
      AL359853
      Consensus CDS
      CCDS1333.1
      UniProtKB/Swiss-Prot
      A8K8R7, Q96GL9
      Conserved Domains (1) summary
      pfam15069
      Location:1166
      FAM163; FAM163 family
    11. NM_001393417.1NP_001380346.1  protein FAM163A

      Status: VALIDATED

      Source sequence(s)
      AL359853
      Consensus CDS
      CCDS1333.1
      UniProtKB/Swiss-Prot
      A8K8R7, Q96GL9
      Conserved Domains (1) summary
      pfam15069
      Location:1166
      FAM163; FAM163 family
    12. NM_001393418.1NP_001380347.1  protein FAM163A

      Status: VALIDATED

      Source sequence(s)
      AL359853
      Consensus CDS
      CCDS1333.1
      UniProtKB/Swiss-Prot
      A8K8R7, Q96GL9
      Conserved Domains (1) summary
      pfam15069
      Location:1166
      FAM163; FAM163 family
    13. NM_001393419.1NP_001380348.1  protein FAM163A

      Status: VALIDATED

      Source sequence(s)
      AL359853
      Consensus CDS
      CCDS1333.1
      UniProtKB/Swiss-Prot
      A8K8R7, Q96GL9
      Conserved Domains (1) summary
      pfam15069
      Location:1166
      FAM163; FAM163 family
    14. NM_001393420.1NP_001380349.1  protein FAM163A

      Status: VALIDATED

      Source sequence(s)
      AL359853
      Consensus CDS
      CCDS1333.1
      UniProtKB/Swiss-Prot
      A8K8R7, Q96GL9
      Conserved Domains (1) summary
      pfam15069
      Location:1166
      FAM163; FAM163 family
    15. NM_001393421.1NP_001380350.1  protein FAM163A

      Status: VALIDATED

      Source sequence(s)
      AL359853
      Consensus CDS
      CCDS1333.1
      UniProtKB/Swiss-Prot
      A8K8R7, Q96GL9
      Conserved Domains (1) summary
      pfam15069
      Location:1166
      FAM163; FAM163 family
    16. NM_001393422.1NP_001380351.1  protein FAM163A

      Status: VALIDATED

      Source sequence(s)
      AL359853
      Consensus CDS
      CCDS1333.1
      UniProtKB/Swiss-Prot
      A8K8R7, Q96GL9
      Conserved Domains (1) summary
      pfam15069
      Location:1166
      FAM163; FAM163 family
    17. NM_001393423.1NP_001380352.1  protein FAM163A

      Status: VALIDATED

      Source sequence(s)
      AL359853
      Consensus CDS
      CCDS1333.1
      UniProtKB/Swiss-Prot
      A8K8R7, Q96GL9
      Conserved Domains (1) summary
      pfam15069
      Location:1166
      FAM163; FAM163 family
    18. NM_173509.3NP_775780.1  protein FAM163A

      See identical proteins and their annotated locations for NP_775780.1

      Status: VALIDATED

      Source sequence(s)
      BC009382
      Consensus CDS
      CCDS1333.1
      UniProtKB/Swiss-Prot
      A8K8R7, Q96GL9
      Related
      ENSP00000354891.4, ENST00000341785.5
      Conserved Domains (1) summary
      pfam15069
      Location:1166
      FAM163; FAM163 family

    RNA

    1. NR_138087.2 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      DB092551, DB151643
    2. NR_138088.2 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      DB061956, DB066264, DB151643
    3. NR_138089.2 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      BC009382, DB151643

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

      Range
      179727776..179816198
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060925.1 Alternate T2T-CHM13v2.0

      Range
      179083538..179171949
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

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