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    REPIN1 replication initiator 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 712920, updated on 17-Aug-2024

    Summary

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    Official Symbol
    REPIN1provided by VGNC
    Official Full Name
    replication initiator 1provided by VGNC
    Primary source
    VGNC:VGNC:76758
    See related
    Ensembl:ENSMMUG00000022633
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See REPIN1 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 3 NC_041756.1 (176318536..176323757)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 3 NC_027895.1 (176532841..176538092)

    Chromosome 3 - NC_041756.1Genomic Context describing neighboring genes Neighboring gene leucine rich repeat containing 61 Neighboring gene Putative protein ZBED10P Neighboring gene retinoic acid receptor responder 2 Neighboring gene uncharacterized LOC114677067 Neighboring gene zinc finger protein 775 Neighboring gene zinc finger and SCAN domain-containing protein 2-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    replication initiator 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041756.1 Reference Mmul_10 Primary Assembly

      Range
      176318536..176323757
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001097329.4 → XP_001097329.3  replication initiator 1 isoform X3

      Conserved Domains (2) summary
      COG5048
      Location:233 → 565
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:461 → 481
      ZF_C2H2; C2H2 Zn finger [structural motif]

    2. XM_015135257.2 → XP_014990743.2  replication initiator 1 isoform X1

      UniProtKB/TrEMBL
      F7FRF8
      Related
      ENSMMUP00000029800.4, ENSMMUT00000031849.4
      Conserved Domains (2) summary
      COG5048
      Location:290 → 622
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:518 → 538
      ZF_C2H2; C2H2 Zn finger [structural motif]

    3. XM_015135261.2 → XP_014990747.2  replication initiator 1 isoform X3

      Conserved Domains (2) summary
      COG5048
      Location:233 → 565
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:461 → 481
      ZF_C2H2; C2H2 Zn finger [structural motif]

    4. XM_015135262.2 → XP_014990748.2  replication initiator 1 isoform X3

      Conserved Domains (2) summary
      COG5048
      Location:233 → 565
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:461 → 481
      ZF_C2H2; C2H2 Zn finger [structural motif]

    5. XM_028846448.1 → XP_028702281.1  replication initiator 1 isoform X3

      Conserved Domains (2) summary
      COG5048
      Location:233 → 565
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:461 → 481
      ZF_C2H2; C2H2 Zn finger [structural motif]

    6. XM_001097933.4 → XP_001097933.4  replication initiator 1 isoform X2

      Conserved Domains (2) summary
      COG5048
      Location:289 → 621
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:517 → 537
      ZF_C2H2; C2H2 Zn finger [structural motif]

    7. XM_028846447.1 → XP_028702280.1  replication initiator 1 isoform X3

      Conserved Domains (2) summary
      COG5048
      Location:233 → 565
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:461 → 481
      ZF_C2H2; C2H2 Zn finger [structural motif]

    8. XM_015135260.2 → XP_014990746.2  replication initiator 1 isoform X3

      Conserved Domains (2) summary
      COG5048
      Location:233 → 565
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:461 → 481
      ZF_C2H2; C2H2 Zn finger [structural motif]

    9. XM_028846444.1 → XP_028702277.1  replication initiator 1 isoform X1

      UniProtKB/TrEMBL
      F7FRF8
      Conserved Domains (2) summary
      COG5048
      Location:290 → 622
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:518 → 538
      ZF_C2H2; C2H2 Zn finger [structural motif]

    10. XM_028846445.1 → XP_028702278.1  replication initiator 1 isoform X2

      Conserved Domains (2) summary
      COG5048
      Location:289 → 621
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:517 → 537
      ZF_C2H2; C2H2 Zn finger [structural motif]
    Nucleotide Protein
    Heading Accession and Version

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