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    CABIN1 calcineurin binding protein 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 700566, updated on 17-Aug-2024

    Summary

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    Official Symbol
    CABIN1provided by VGNC
    Official Full Name
    calcineurin binding protein 1provided by VGNC
    Primary source
    VGNC:VGNC:84563
    See related
    Ensembl:ENSMMUG00000020992
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See CABIN1 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    39
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 10 NC_041763.1 (28187369..28350766)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 10 NC_027902.1 (65980234..66144093)

    Chromosome 10 - NC_041763.1Genomic Context describing neighboring genes Neighboring gene ral-GDS-related protein Neighboring gene glutathione S-transferase theta 1 Neighboring gene glutathione S-transferase theta 4 Neighboring gene glutathione hydrolase 5 proenzyme Neighboring gene sushi domain containing 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables nucleosome binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in chromatin organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    calcineurin-binding protein cabin-1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041763.1 Reference Mmul_10 Primary Assembly

      Range
      28187369..28350766
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015149876.2 → XP_015005362.2  calcineurin-binding protein cabin-1 isoform X1

      UniProtKB/TrEMBL
      A0A5F7ZGC9, H9Z748
      Related
      ENSMMUP00000064646.1, ENSMMUT00000091936.1
      Conserved Domains (4) summary
      PHA03307
      Location:1918 → 2184
      PHA03307; transcriptional regulator ICP4; Provisional
      COG0457
      Location:34 → 210
      TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
      cd13839
      Location:2154 → 2188
      MEF2_binding; Mycocyte enhancer factor-2 (MEF2) binding domain of the calcineurin-binding protein cabin-1
      sd00006
      Location:90 → 118
      TPR; TPR repeat [structural motif]

    2. XM_015149875.2 → XP_015005361.2  calcineurin-binding protein cabin-1 isoform X1

      UniProtKB/TrEMBL
      A0A5F7ZGC9, H9Z748
      Conserved Domains (4) summary
      PHA03307
      Location:1918 → 2184
      PHA03307; transcriptional regulator ICP4; Provisional
      COG0457
      Location:34 → 210
      TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
      cd13839
      Location:2154 → 2188
      MEF2_binding; Mycocyte enhancer factor-2 (MEF2) binding domain of the calcineurin-binding protein cabin-1
      sd00006
      Location:90 → 118
      TPR; TPR repeat [structural motif]

    3. XM_015149879.2 → XP_015005365.2  calcineurin-binding protein cabin-1 isoform X3

      UniProtKB/TrEMBL
      A0A1D5QP61, H9Z748
      Related
      ENSMMUP00000049838.2, ENSMMUT00000073299.2
      Conserved Domains (5) summary
      PHA03247
      Location:1911 → 2129
      PHA03247; large tegument protein UL36; Provisional
      PHA03307
      Location:1682 → 2132
      PHA03307; transcriptional regulator ICP4; Provisional
      COG0457
      Location:34 → 210
      TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
      cd13839
      Location:2125 → 2159
      MEF2_binding; Mycocyte enhancer factor-2 (MEF2) binding domain of the calcineurin-binding protein cabin-1
      sd00006
      Location:90 → 118
      TPR; TPR repeat [structural motif]

    4. XM_015149882.2 → XP_015005368.2  calcineurin-binding protein cabin-1 isoform X7

      UniProtKB/TrEMBL
      H9Z748
      Conserved Domains (4) summary
      PHA03247
      Location:1911 → 2062
      PHA03247; large tegument protein UL36; Provisional
      COG0457
      Location:34 → 210
      TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
      cd13839
      Location:2066 → 2095
      MEF2_binding; Mycocyte enhancer factor-2 (MEF2) binding domain of the calcineurin-binding protein cabin-1
      sd00006
      Location:90 → 118
      TPR; TPR repeat [structural motif]

    5. XM_015149880.2 → XP_015005366.2  calcineurin-binding protein cabin-1 isoform X4

      UniProtKB/TrEMBL
      H9H479, H9Z748
      Related
      ENSMMUP00000027622.4, ENSMMUT00000029519.4
      Conserved Domains (4) summary
      PHA03378
      Location:1921 → 2139
      PHA03378; EBNA-3B; Provisional
      COG0457
      Location:34 → 210
      TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
      cd13839
      Location:2099 → 2133
      MEF2_binding; Mycocyte enhancer factor-2 (MEF2) binding domain of the calcineurin-binding protein cabin-1
      sd00006
      Location:90 → 118
      TPR; TPR repeat [structural motif]

    6. XM_015149881.2 → XP_015005367.2  calcineurin-binding protein cabin-1 isoform X6

      UniProtKB/TrEMBL
      H9Z748
      Conserved Domains (4) summary
      PHA03247
      Location:1918 → 2109
      PHA03247; large tegument protein UL36; Provisional
      COG0457
      Location:34 → 210
      TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
      cd13839
      Location:2070 → 2104
      MEF2_binding; Mycocyte enhancer factor-2 (MEF2) binding domain of the calcineurin-binding protein cabin-1
      sd00006
      Location:90 → 118
      TPR; TPR repeat [structural motif]

    7. XM_015149883.2 → XP_015005369.2  calcineurin-binding protein cabin-1 isoform X8

      UniProtKB/TrEMBL
      H9Z748
      Related
      ENSMMUP00000046666.2, ENSMMUT00000056014.2
      Conserved Domains (4) summary
      COG0457
      Location:34 → 210
      TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
      cd13839
      Location:2012 → 2040
      MEF2_binding; Mycocyte enhancer factor-2 (MEF2) binding domain of the calcineurin-binding protein cabin-1
      sd00006
      Location:90 → 118
      TPR; TPR repeat [structural motif]
      pfam05109
      Location:1919 → 2040
      Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)

    8. XM_028828568.1 → XP_028684401.1  calcineurin-binding protein cabin-1 isoform X2

      UniProtKB/TrEMBL
      H9Z748
      Related
      ENSMMUP00000041008.3, ENSMMUT00000047970.3
      Conserved Domains (4) summary
      PHA03307
      Location:1893 → 2159
      PHA03307; transcriptional regulator ICP4; Provisional
      COG0457
      Location:34 → 210
      TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
      cd13839
      Location:2129 → 2163
      MEF2_binding; Mycocyte enhancer factor-2 (MEF2) binding domain of the calcineurin-binding protein cabin-1
      sd00006
      Location:90 → 118
      TPR; TPR repeat [structural motif]

    9. XM_028828569.1 → XP_028684402.1  calcineurin-binding protein cabin-1 isoform X5

      UniProtKB/TrEMBL
      H9H480, H9Z748
      Related
      ENSMMUP00000027623.4, ENSMMUT00000029520.4
      Conserved Domains (4) summary
      PHA03307
      Location:1857 → 2123
      PHA03307; transcriptional regulator ICP4; Provisional
      COG0457
      Location:34 → 210
      TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
      cd13839
      Location:2093 → 2127
      MEF2_binding; Mycocyte enhancer factor-2 (MEF2) binding domain of the calcineurin-binding protein cabin-1
      sd00006
      Location:90 → 118
      TPR; TPR repeat [structural motif]

    10. XM_015149877.2 → XP_015005363.2  calcineurin-binding protein cabin-1 isoform X1

      UniProtKB/TrEMBL
      A0A5F7ZGC9, H9Z748
      Conserved Domains (4) summary
      PHA03307
      Location:1918 → 2184
      PHA03307; transcriptional regulator ICP4; Provisional
      COG0457
      Location:34 → 210
      TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
      cd13839
      Location:2154 → 2188
      MEF2_binding; Mycocyte enhancer factor-2 (MEF2) binding domain of the calcineurin-binding protein cabin-1
      sd00006
      Location:90 → 118
      TPR; TPR repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version

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