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    LOC716070 Fanconi anemia group D2 protein [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 716070, updated on 9-Nov-2023

    Summary

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    Gene symbol
    LOC716070
    Gene description
    Fanconi anemia group D2 protein
    See related
    Ensembl:ENSMMUG00000008966
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    FANCD2
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    Genomic context

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    See LOC716070 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    45
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 2 NC_041755.1 (141422631..141498389)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 2 NC_027894.1 (56234466..56269301, complement)

    Chromosome 2 - NC_041755.1Genomic Context describing neighboring genes Neighboring gene mucin-13-like Neighboring gene uncharacterized LOC114676391 Neighboring gene cell death activator CIDE-3-like Neighboring gene U6 spliceosomal RNA Neighboring gene cytochrome c-like Neighboring gene uncharacterized LOC106996831 Neighboring gene FANCD2 opposite strand Neighboring gene BRICK1 subunit of SCAR/WAVE actin nucleating complex

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA polymerase binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in double-strand break repair involved in meiotic recombination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in homologous chromosome pairing at meiosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in interstrand cross-link repair IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in mitotic intra-S DNA damage checkpoint signaling IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in condensed chromosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    Fanconi anemia group D2 protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041755.1 Reference Mmul_10 Primary Assembly

      Range
      141422631..141498389
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028844426.1 → XP_028700259.1  Fanconi anemia group D2 protein isoform X2

      UniProtKB/TrEMBL
      A0A1D5RHD5
      Conserved Domains (1) summary
      pfam14631
      Location:42 → 1422
      FancD2; Fanconi anaemia protein FancD2 nuclease

    2. XM_028844428.1 → XP_028700261.1  Fanconi anemia group D2 protein isoform X3

      UniProtKB/TrEMBL
      H9H3A1
      Conserved Domains (1) summary
      pfam14631
      Location:42 → 1431
      FancD2; Fanconi anaemia protein FancD2 nuclease

    3. XM_028844429.1 → XP_028700262.1  Fanconi anemia group D2 protein isoform X4

      UniProtKB/TrEMBL
      H9H3A1
      Related
      ENSMMUP00000011749.4, ENSMMUT00000012530.4
      Conserved Domains (1) summary
      pfam14631
      Location:42 → 1422
      FancD2; Fanconi anaemia protein FancD2 nuclease

    4. XM_028844424.1 → XP_028700257.1  Fanconi anemia group D2 protein isoform X1

      UniProtKB/TrEMBL
      A0A1D5RHD5
      Conserved Domains (1) summary
      pfam14631
      Location:42 → 1431
      FancD2; Fanconi anaemia protein FancD2 nuclease

    5. XM_028844432.1 → XP_028700265.1  Fanconi anemia group D2 protein isoform X6

      UniProtKB/TrEMBL
      A0A1D5RHD5
      Conserved Domains (1) summary
      pfam14631
      Location:42 → 1369
      FancD2; Fanconi anaemia protein FancD2 nuclease

    6. XM_028844431.1 → XP_028700264.1  Fanconi anemia group D2 protein isoform X5

      UniProtKB/TrEMBL
      A0A1D5RHD5
      Related
      ENSMMUP00000032245.3, ENSMMUT00000039162.3
      Conserved Domains (1) summary
      pfam14631
      Location:42 → 1392
      FancD2; Fanconi anaemia protein FancD2 nuclease

    7. XM_028844433.1 → XP_028700266.1  Fanconi anemia group D2 protein isoform X7

      UniProtKB/TrEMBL
      A0A1D5RHD5
      Conserved Domains (1) summary
      cl17018
      Location:39 → 1301
      FANC; Fanconi anemia ID complex proteins FANCI and FANCD2

    8. XM_028844430.1 → XP_028700263.1  Fanconi anemia group D2 protein isoform X4

      UniProtKB/TrEMBL
      H9H3A1
      Conserved Domains (1) summary
      pfam14631
      Location:42 → 1422
      FancD2; Fanconi anaemia protein FancD2 nuclease

    9. XM_028844427.1 → XP_028700260.1  Fanconi anemia group D2 protein isoform X2

      UniProtKB/TrEMBL
      A0A1D5RHD5
      Related
      ENSMMUP00000059729.2, ENSMMUT00000079042.2
      Conserved Domains (1) summary
      pfam14631
      Location:42 → 1422
      FancD2; Fanconi anaemia protein FancD2 nuclease

    10. XM_028844425.1 → XP_028700258.1  Fanconi anemia group D2 protein isoform X1

      UniProtKB/TrEMBL
      A0A1D5RHD5
      Conserved Domains (1) summary
      pfam14631
      Location:42 → 1431
      FancD2; Fanconi anaemia protein FancD2 nuclease

    11. XM_028844434.1 → XP_028700267.1  Fanconi anemia group D2 protein isoform X7

      UniProtKB/TrEMBL
      A0A1D5RHD5
      Conserved Domains (1) summary
      cl17018
      Location:39 → 1301
      FANC; Fanconi anemia ID complex proteins FANCI and FANCD2

    12. XM_028844435.1 → XP_028700268.1  Fanconi anemia group D2 protein isoform X8

      UniProtKB/TrEMBL
      A0A1D5RHD5
      Conserved Domains (1) summary
      pfam14631
      Location:1 → 1298
      FancD2; Fanconi anaemia protein FancD2 nuclease

    13. XM_028844436.1 → XP_028700269.1  Fanconi anemia group D2 protein isoform X9

      UniProtKB/TrEMBL
      A0A1D5RHD5
      Conserved Domains (1) summary
      cl17018
      Location:1 → 1228
      FANC; Fanconi anemia ID complex proteins FANCI and FANCD2
    Nucleotide Protein
    Heading Accession and Version

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