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    CORO1C coronin 1C [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 707498, updated on 17-Aug-2024

    Summary

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    Official Symbol
    CORO1Cprovided by VGNC
    Official Full Name
    coronin 1Cprovided by VGNC
    Primary source
    VGNC:VGNC:71321
    See related
    Ensembl:ENSMMUG00000000512
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See CORO1C in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 11 NC_041764.1 (108272937..108360257, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 11 NC_027903.1 (108555296..108642790, complement)

    Chromosome 11 - NC_041764.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107001009 Neighboring gene selectin P ligand Neighboring gene U7 small nuclear RNA Neighboring gene slingshot protein phosphatase 1 Neighboring gene uncharacterized LOC107001010 Neighboring gene D-amino acid oxidase

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables actin filament binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in actin filament organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in neural crest cell migration IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    coronin-1C

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001265934.1 → NP_001252863.1  coronin-1C

      See identical proteins and their annotated locations for NP_001252863.1

      Status: PROVISIONAL

      Source sequence(s)
      JU471222
      UniProtKB/TrEMBL
      A0A5F8A7V4, F6UBA0, F6YB63
      Related
      ENSMMUP00000065869.1, ENSMMUT00000085504.1
      Conserved Domains (5) summary
      pfam05873
      Location:418 → 474
      Mt_ATP-synt_D; ATP synthase D chain, mitochondrial (ATP5H)
      pfam08953
      Location:6 → 63
      DUF1899; Domain of unknown function (DUF1899)
      pfam16300
      Location:343 → 385
      WD40_4; Type of WD40 repeat
      sd00039
      Location:36 → 78
      7WD40; WD40 repeat [structural motif]
      cl02567
      Location:75 → 300
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041764.1 Reference Mmul_10 Primary Assembly

      Range
      108272937..108360257 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028828899.1 → XP_028684732.1  coronin-1C isoform X1

      UniProtKB/TrEMBL
      A0A5F7Z8D9
      Conserved Domains (2) summary
      PTZ00421
      Location:80 → 474
      PTZ00421; coronin; Provisional
      sd00039
      Location:108 → 150
      7WD40; WD40 repeat [structural motif]

    2. XM_015152713.2 → XP_015008199.1  coronin-1C isoform X2

      UniProtKB/TrEMBL
      A0A5F7Z8D9
      Related
      ENSMMUP00000061783.1, ENSMMUT00000110154.1
      Conserved Domains (5) summary
      pfam05873
      Location:424 → 480
      Mt_ATP-synt_D; ATP synthase D chain, mitochondrial (ATP5H)
      pfam08953
      Location:12 → 69
      DUF1899; Domain of unknown function (DUF1899)
      pfam16300
      Location:349 → 391
      WD40_4; Type of WD40 repeat
      sd00039
      Location:42 → 84
      7WD40; WD40 repeat [structural motif]
      cl02567
      Location:81 → 306
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    Nucleotide Protein
    Heading Accession and Version

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