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    MPDU1 mannose-P-dolichol utilization defect 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 715962, updated on 17-Aug-2024

    Summary

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    Official Symbol
    MPDU1provided by VGNC
    Official Full Name
    mannose-P-dolichol utilization defect 1provided by VGNC
    Primary source
    VGNC:VGNC:74913
    Locus tag
    EGK_08136
    See related
    Ensembl:ENSMMUG00000013503
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See MPDU1 in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 16 NC_041769.1 (7359908..7364368)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 16 NC_027908.1 (7562650..7567767)

    Chromosome 16 - NC_041769.1Genomic Context describing neighboring genes Neighboring gene CD68 molecule Neighboring gene MPDU1 antisense RNA 1 Neighboring gene uncharacterized LOC114673048 Neighboring gene SRY-box transcription factor 15 Neighboring gene FMR1 autosomal homolog 2 Neighboring gene small nucleolar RNA U13

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in oligosaccharide biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    mannose-P-dolichol utilization defect 1 protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001266148.1 → NP_001253077.1  mannose-P-dolichol utilization defect 1 protein

      See identical proteins and their annotated locations for NP_001253077.1

      Status: PROVISIONAL

      Source sequence(s)
      JU337208
      UniProtKB/TrEMBL
      F6ZDI5, H9G252
      Related
      ENSMMUP00000017765.3, ENSMMUT00000018968.3
      Conserved Domains (1) summary
      TIGR00951
      Location:40 → 235
      2A43; Lysosomal Cystine Transporter

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041769.1 Reference Mmul_10 Primary Assembly

      Range
      7359908..7364368
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015118495.2 → XP_014973981.1  mannose-P-dolichol utilization defect 1 protein isoform X3

      Conserved Domains (3) summary
      smart00679
      Location:160 → 191
      CTNS; Repeated motif present between transmembrane helices in cystinosin, yeast ERS1p, mannose-P-dolichol utilization defect 1, and other hypothetical proteins
      TIGR00951
      Location:52 → 228
      2A43; Lysosomal Cystine Transporter
      pfam04193
      Location:51 → 94
      PQ-loop; PQ loop repeat

    2. XM_015118496.2 → XP_014973982.1  mannose-P-dolichol utilization defect 1 protein isoform X4

      Conserved Domains (1) summary
      TIGR00951
      Location:27 → 213
      2A43; Lysosomal Cystine Transporter

    3. XM_015118494.2 → XP_014973980.1  mannose-P-dolichol utilization defect 1 protein isoform X2

      Conserved Domains (2) summary
      TIGR00951
      Location:46 → 161
      2A43; Lysosomal Cystine Transporter
      pfam04193
      Location:51 → 94
      PQ-loop; PQ loop repeat

    4. XM_015118493.2 → XP_014973979.1  mannose-P-dolichol utilization defect 1 protein isoform X1

      UniProtKB/TrEMBL
      G7NIG3
      Conserved Domains (2) summary
      TIGR00951
      Location:40 → 168
      2A43; Lysosomal Cystine Transporter
      pfam04193
      Location:43 → 101
      PQ-loop; PQ loop repeat
    Nucleotide Protein
    Heading Accession and Version

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