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    LRRC28 leucine rich repeat containing 28 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 708649, updated on 17-Aug-2024

    Summary

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    Official Symbol
    LRRC28provided by VGNC
    Official Full Name
    leucine rich repeat containing 28provided by VGNC
    Primary source
    VGNC:VGNC:81432
    Locus tag
    EGK_17880
    See related
    Ensembl:ENSMMUG00000005226
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See LRRC28 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 7 NC_041760.1 (78454964..78585604)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 7 NC_027899.1 (77912472..78042623)

    Chromosome 7 - NC_041760.1Genomic Context describing neighboring genes Neighboring gene synemin Neighboring gene tetratricopeptide repeat domain 23 Neighboring gene endoplasmin-like Neighboring gene uncharacterized LOC114679268 Neighboring gene myocyte enhancer factor 2A

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    leucine-rich repeat-containing protein 28

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001257772.1 → NP_001244701.1  leucine-rich repeat-containing protein 28

      See identical proteins and their annotated locations for NP_001244701.1

      Status: PROVISIONAL

      Source sequence(s)
      JU332888
      UniProtKB/TrEMBL
      A0A5F7ZC21, A0A8J8Y6U3, F7C2V5, G7MWA9
      Related
      ENSMMUP00000069725.1, ENSMMUT00000099630.1
      Conserved Domains (2) summary
      PRK15370
      Location:46 → 306
      PRK15370; type III secretion system effector E3 ubiquitin transferase SlrP
      sd00033
      Location:43 → 66
      LRR_RI; leucine-rich repeat [structural motif]

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041760.1 Reference Mmul_10 Primary Assembly

      Range
      78454964..78585604
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015143127.2 → XP_014998613.1  leucine-rich repeat-containing protein 28 isoform X2

      UniProtKB/TrEMBL
      F7C2V5
      Conserved Domains (2) summary
      sd00033
      Location:43 → 66
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:43 → 100
      LRR_8; Leucine rich repeat

    2. XM_028850369.1 → XP_028706202.1  leucine-rich repeat-containing protein 28 isoform X1

      UniProtKB/TrEMBL
      F7C2V5
      Conserved Domains (2) summary
      PRK15370
      Location:46 → 306
      PRK15370; E3 ubiquitin-protein ligase SlrP; Provisional
      sd00033
      Location:43 → 66
      LRR_RI; leucine-rich repeat [structural motif]

    3. XM_028850370.1 → XP_028706203.1  leucine-rich repeat-containing protein 28 isoform X3

      Conserved Domains (2) summary
      PRK15370
      Location:3 → 237
      PRK15370; E3 ubiquitin-protein ligase SlrP; Provisional
      sd00033
      Location:20 → 42
      LRR_RI; leucine-rich repeat [structural motif]

    4. XM_015143129.2 → XP_014998615.1  leucine-rich repeat-containing protein 28 isoform X4

      UniProtKB/TrEMBL
      F7C2I1, F7C2V5
      Related
      ENSMMUP00000006920.3, ENSMMUT00000007362.4
      Conserved Domains (2) summary
      PRK15370
      Location:3 → 237
      PRK15370; type III secretion system effector E3 ubiquitin transferase SlrP
      sd00033
      Location:20 → 42
      LRR_RI; leucine-rich repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version

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