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    TAF4 TATA-box binding protein associated factor 4 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 720204, updated on 17-Aug-2024

    Summary

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    Official Symbol
    TAF4provided by VGNC
    Official Full Name
    TATA-box binding protein associated factor 4provided by VGNC
    Primary source
    VGNC:VGNC:98455
    See related
    Ensembl:ENSMMUG00000008696
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See TAF4 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 10 NC_041763.1 (97124150..97212023, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 10 NC_027902.1 (2320918..2410055)

    Chromosome 10 - NC_041763.1Genomic Context describing neighboring genes Neighboring gene cadherin 4 Neighboring gene uncharacterized LOC107000341 Neighboring gene uncharacterized LOC107000338 Neighboring gene uncharacterized LOC114670527 Neighboring gene LSM family member 14B

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II general transcription initiation factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein heterodimerization activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in transcription initiation at RNA polymerase II promoter IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of transcription factor TFIID complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    transcription initiation factor TFIID subunit 4
    Names
    TAF4 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 135kDa

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041763.1 Reference Mmul_10 Primary Assembly

      Range
      97124150..97212023 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015148644.2 → XP_015004130.2  transcription initiation factor TFIID subunit 4

      UniProtKB/TrEMBL
      F7E5W7
      Related
      ENSMMUP00000011401.4, ENSMMUT00000012154.4
      Conserved Domains (3) summary
      PHA03247
      Location:408 → 798
      PHA03247; large tegument protein UL36; Provisional
      pfam05236
      Location:832 → 1080
      TAF4; Transcription initiation factor TFIID component TAF4 family
      pfam07531
      Location:590 → 673
      TAFH; NHR1 homology to TAF
    Nucleotide Protein
    Heading Accession and Version

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