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    CARMIL3 capping protein regulator and myosin 1 linker 3 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 714256, updated on 17-Aug-2024

    Summary

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    Official Symbol
    CARMIL3provided by VGNC
    Official Full Name
    capping protein regulator and myosin 1 linker 3provided by VGNC
    Primary source
    VGNC:VGNC:70588
    See related
    Ensembl:ENSMMUG00000007357
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See CARMIL3 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    40
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 7 NC_041760.1 (86136237..86153575)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 7 NC_027899.1 (85460194..85477585)

    Chromosome 7 - NC_041760.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106999362 Neighboring gene dehydrogenase/reductase 4 like 2 Neighboring gene dehydrogenase/reductase (SDR family) member 4 like 1 Neighboring gene copine 6 Neighboring gene neural retina leucine zipper Neighboring gene phosphoenolpyruvate carboxykinase 2, mitochondrial

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell migration IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of Arp2/3 complex-mediated actin nucleation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in lamellipodium IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    capping protein, Arp2/3 and myosin-I linker protein 3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041760.1 Reference Mmul_10 Primary Assembly

      Range
      86136237..86153575
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015143420.2 → XP_014998906.1  capping protein, Arp2/3 and myosin-I linker protein 3 isoform X1

      UniProtKB/TrEMBL
      G7MX55
      Conserved Domains (6) summary
      PRK12323
      Location:1186 → 1370
      PRK12323; DNA polymerase III subunit gamma/tau
      sd00033
      Location:275 → 303
      LRR_RI; leucine-rich repeat [structural motif]
      sd00034
      Location:544 → 570
      LRR_AMN1; leucine-rich repeat [structural motif]
      pfam16000
      Location:778 → 1064
      CARMIL_C; CARMIL C-terminus
      pfam17888
      Location:30 → 118
      Carm_PH; Carmil pleckstrin homology domain
      cl39015
      Location:339 → 600
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...

    2. XM_015143421.2 → XP_014998907.1  capping protein, Arp2/3 and myosin-I linker protein 3 isoform X2

      UniProtKB/TrEMBL
      G7MX55
      Conserved Domains (4) summary
      cd00116
      Location:339 → 600
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
      sd00033
      Location:275 → 303
      LRR_RI; leucine-rich repeat [structural motif]
      sd00034
      Location:544 → 570
      LRR_AMN1; leucine-rich repeat [structural motif]
      pfam16000
      Location:778 → 1064
      CARMIL_C; CARMIL C-terminus

    3. XM_028851436.1 → XP_028707269.1  capping protein, Arp2/3 and myosin-I linker protein 3 isoform X5

      UniProtKB/TrEMBL
      G7MX55
      Conserved Domains (5) summary
      PRK07764
      Location:1122 → 1334
      PRK07764; DNA polymerase III subunits gamma and tau; Validated
      sd00033
      Location:275 → 303
      LRR_RI; leucine-rich repeat [structural motif]
      sd00034
      Location:544 → 570
      LRR_AMN1; leucine-rich repeat [structural motif]
      pfam16000
      Location:778 → 1064
      CARMIL_C; CARMIL C-terminus
      cl29113
      Location:339 → 600
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...

    4. XM_028851435.1 → XP_028707268.1  capping protein, Arp2/3 and myosin-I linker protein 3 isoform X3

      UniProtKB/TrEMBL
      G7MX55
      Conserved Domains (5) summary
      PHA03247
      Location:1134 → 1368
      PHA03247; large tegument protein UL36; Provisional
      sd00033
      Location:275 → 303
      LRR_RI; leucine-rich repeat [structural motif]
      sd00034
      Location:544 → 570
      LRR_AMN1; leucine-rich repeat [structural motif]
      pfam16000
      Location:778 → 1063
      CARMIL_C; CARMIL C-terminus
      cl29113
      Location:339 → 600
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...

    5. XM_015143422.2 → XP_014998908.1  capping protein, Arp2/3 and myosin-I linker protein 3 isoform X4

      UniProtKB/TrEMBL
      F7E9C7, G7MX55
      Related
      ENSMMUP00000009653.4, ENSMMUT00000010288.4
      Conserved Domains (4) summary
      cd00116
      Location:339 → 600
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
      sd00033
      Location:275 → 303
      LRR_RI; leucine-rich repeat [structural motif]
      sd00034
      Location:544 → 570
      LRR_AMN1; leucine-rich repeat [structural motif]
      pfam16000
      Location:778 → 1063
      CARMIL_C; CARMIL C-terminus

    6. XM_028851437.1 → XP_028707270.1  capping protein, Arp2/3 and myosin-I linker protein 3 isoform X6

      UniProtKB/TrEMBL
      G7MX55
      Conserved Domains (5) summary
      PRK07764
      Location:1121 → 1333
      PRK07764; DNA polymerase III subunits gamma and tau; Validated
      sd00033
      Location:275 → 303
      LRR_RI; leucine-rich repeat [structural motif]
      sd00034
      Location:544 → 570
      LRR_AMN1; leucine-rich repeat [structural motif]
      pfam16000
      Location:778 → 1063
      CARMIL_C; CARMIL C-terminus
      cl29113
      Location:339 → 600
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...

    7. XM_028851438.1 → XP_028707271.1  capping protein, Arp2/3 and myosin-I linker protein 3 isoform X7

      UniProtKB/TrEMBL
      G7MX55
      Conserved Domains (5) summary
      PHA03247
      Location:1023 → 1268
      PHA03247; large tegument protein UL36; Provisional
      sd00033
      Location:178 → 206
      LRR_RI; leucine-rich repeat [structural motif]
      sd00034
      Location:447 → 473
      LRR_AMN1; leucine-rich repeat [structural motif]
      pfam16000
      Location:681 → 967
      CARMIL_C; CARMIL C-terminus
      cl29113
      Location:242 → 503
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
    Nucleotide Protein
    Heading Accession and Version

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