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    LOC704512 trophinin [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 704512, updated on 6-Oct-2023

    Summary

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    Gene symbol
    LOC704512
    Gene description
    trophinin
    See related
    Ensembl:ENSMMUG00000008422
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    TRO
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    Genomic context

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    See LOC704512 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) X NC_041774.1 (54657316..54670361)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) X NC_027913.1 (54348958..54362003)

    Chromosome X - NC_041774.1Genomic Context describing neighboring genes Neighboring gene inter-alpha-trypsin inhibitor heavy chain family member 6 Neighboring gene small nucleolar RNA SNORA11 Neighboring gene MAGE family member D2 Neighboring gene small nucleolar RNA SNORA11 Neighboring gene 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1 Neighboring gene apurinic/apyrimidinic endodeoxyribonuclease 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    trophinin

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041774.1 Reference Mmul_10 Primary Assembly

      Range
      54657316..54670361
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015127521.1 → XP_014983007.1  trophinin isoform X3

      UniProtKB/TrEMBL
      F7HFL5
      Related
      ENSMMUP00000011041.4, ENSMMUT00000011774.4
      Conserved Domains (2) summary
      pfam01454
      Location:451 → 611
      MAGE; MAGE family
      NF033849
      Location:927 → 1266
      ser_rich_anae_1; serine-rich protein

    2. XM_015127518.2 → XP_014983004.1  trophinin isoform X1

      Conserved Domains (1) summary
      pfam01454
      Location:515 → 675
      MAGE; MAGE family

    3. XM_015127525.2 → XP_014983011.2  trophinin isoform X5

      Conserved Domains (3) summary
      PRK12688
      Location:516 → 963
      PRK12688; flagellin; Reviewed
      PTZ00395
      Location:672 → 894
      PTZ00395; Sec24-related protein; Provisional
      pfam01454
      Location:118 → 278
      MAGE; MAGE family

    4. XM_015127519.2 → XP_014983005.1  trophinin isoform X2

      Conserved Domains (1) summary
      pfam01454
      Location:510 → 670
      MAGE; MAGE family

    5. XM_015127527.2 → XP_014983013.1  trophinin isoform X6

      Conserved Domains (1) summary
      pfam01454
      Location:113 → 273
      MAGE; MAGE family

    6. XM_015127524.1 → XP_014983010.1  trophinin isoform X4

      Conserved Domains (2) summary
      pfam01454
      Location:407 → 567
      MAGE; MAGE family
      NF033849
      Location:883 → 1222
      ser_rich_anae_1; serine-rich protein

    7. XM_015127523.1 → XP_014983009.1  trophinin isoform X4

      Conserved Domains (2) summary
      pfam01454
      Location:407 → 567
      MAGE; MAGE family
      NF033849
      Location:883 → 1222
      ser_rich_anae_1; serine-rich protein

    8. XM_015127522.1 → XP_014983008.1  trophinin isoform X4

      Conserved Domains (2) summary
      pfam01454
      Location:407 → 567
      MAGE; MAGE family
      NF033849
      Location:883 → 1222
      ser_rich_anae_1; serine-rich protein

    9. XM_028842517.1 → XP_028698350.1  trophinin isoform X3

      UniProtKB/TrEMBL
      F7HFL5
      Conserved Domains (2) summary
      pfam01454
      Location:451 → 611
      MAGE; MAGE family
      NF033849
      Location:927 → 1266
      ser_rich_anae_1; serine-rich protein

    10. XM_028842518.1 → XP_028698351.1  trophinin isoform X7

      Conserved Domains (2) summary
      pfam01454
      Location:54 → 214
      MAGE; MAGE family
      NF033849
      Location:530 → 869
      ser_rich_anae_1; serine-rich protein

    11. XM_015127520.1 → XP_014983006.1  trophinin isoform X3

      UniProtKB/TrEMBL
      F7HFL5
      Related
      ENSMMUP00000027800.4, ENSMMUT00000029704.4
      Conserved Domains (2) summary
      pfam01454
      Location:451 → 611
      MAGE; MAGE family
      NF033849
      Location:927 → 1266
      ser_rich_anae_1; serine-rich protein

    12. XM_028842516.1 → XP_028698349.1  trophinin isoform X3

      UniProtKB/TrEMBL
      F7HFL5
      Conserved Domains (2) summary
      pfam01454
      Location:451 → 611
      MAGE; MAGE family
      NF033849
      Location:927 → 1266
      ser_rich_anae_1; serine-rich protein
    Nucleotide Protein
    Heading Accession and Version

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