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Conserved domains on  [gi|1622971899|ref|XP_028698349|]
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trophinin isoform X3 [Macaca mulatta]

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
ser_rich_anae_1 super family cl41472
serine-rich protein; This serine-rich protein belongs to a family with large size (over 1000 ...
927-1266 1.60e-23

serine-rich protein; This serine-rich protein belongs to a family with large size (over 1000 amino acids), which a highly serine-rich central region that averages over 300 aa in length. Species encoding members of this family of proteins tend to be anaerobic bacteria, including Gram-positive bacteria of the human gut microbiome and Chloroflexi from marine sediments.


The actual alignment was detected with superfamily member NF033849:

Pssm-ID: 468206 [Multi-domain]  Cd Length: 1122  Bit Score: 108.55  E-value: 1.60e-23
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899  927 GTLSTSVSFGGPSSTSANCGGTLSTSIcfdgspSTGAGFGGALNTSASFGSALNTSAGFGGAMSTSADFGSTLSTSVCFG 1006
Cdd:NF033849   217 GQKSISFGVSLPMMYAANLGQSAGTGY------GESVGHSTSQGQSHSVGTSESHSVGTSQSQSHTTGHGSTRGWSHTQS 290
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1007 GSPGTSVSFGSALNTSAGFGGAVSTSTDFGGTLSTSVCFGGSPSTSAGFSGALNTNASFGCAISTSAGFSGAVGTSAGFS 1086
Cdd:NF033849   291 TSESESTGQSSSVGTSESQSHGTTEGTSTTDSSSHSQSSSYNVSSGTGVSSSHSDGTSQSTSISHSESSSESTGTSVGHS 370
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1087 GVPSTNPGFGGAFNTSAGFGGALSTTTDFGGTPNNSIGFGAAPSTSVSFG-GAHSTSLCFGGAPSTSLCFGSASNTnlcf 1165
Cdd:NF033849   371 TSSSVSSSESSSRSSSSGVSGGFSGGIAGGGVTSEGLGASQGGSEGWGSGdSVQSVSQSYGSSSSTGTSSGHSDSS---- 446
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1166 ggppSTSACFSGATSPSFGDGPSTSTGFSFGNGLSTSAGFGGGLNTSAGFGGGLGTSAGFSGDLSTSSGFDGGLGTSAGF 1245
Cdd:NF033849   447 ----SHSTSSGQADSVSQGTSWSEGTGTSQGQSVGTSESWSTSQSETDSVGDSTGTSESVSQGDGRSTGRSESQGTSLGT 522
                          330       340
                   ....*....|....*....|.
gi 1622971899 1246 SGGPGTSTGFGGGLGTSAGFS 1266
Cdd:NF033849   523 SGGRTSGAGGSMGLGPSISLG 543
MAGE pfam01454
MAGE homology domain; The MAGE (melanoma antigen-encoding gene) family are expressed in a wide ...
451-611 6.84e-23

MAGE homology domain; The MAGE (melanoma antigen-encoding gene) family are expressed in a wide variety of tumours but not in normal cells, with the exception of the male germ cells, placenta, and, possibly, cells of the developing embryo. The cellular function of this family is unknown. This family also contains the yeast protein, Nse3. The Nse3 protein is part of the Smc5-6 complex. Nse3 has been demonstrated to be important for meiosis.


:

Pssm-ID: 426270  Cd Length: 205  Bit Score: 98.11  E-value: 6.84e-23
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899  451 LVKYLLVKDQTKIPIKRSDMLRDVIQEYDE-YFPEIIERASYALEKMFRVNLKEID--------------------KQSS 509
Cdd:pfam01454    1 LVRYALACEYQRTPIRREDISKKVLGENRKrLFKKVFEEAQKILRDVFGMELVELPakeekkttvtsqqrraaaksSRSK 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899  510 LYILIST---RESSAGILGTTK---------DTPKLGLLMVILSVIFMNGNKASEAVIWEVLRKLGLH---PGVRHSLFG 574
Cdd:pfam01454   81 SYILVSTlppEYRVPAIIWPSKapsfvldqdEATYTGILTVILSLILLSGGSISEQELLRYLRRLGIDtdgTKEIPPLNG 160
                          170       180       190
                   ....*....|....*....|....*....|....*....
gi 1622971899  575 EVRKLItDEFVKQKYLEYKRVPNSRP--PEYEFFWGLRS 611
Cdd:pfam01454  161 NTDDLL-KRLVKQGYLVRTKEGASDDgeEIIEYRVGPRA 198
ser_rich_anae_1 super family cl41472
serine-rich protein; This serine-rich protein belongs to a family with large size (over 1000 ...
709-1085 1.49e-16

serine-rich protein; This serine-rich protein belongs to a family with large size (over 1000 amino acids), which a highly serine-rich central region that averages over 300 aa in length. Species encoding members of this family of proteins tend to be anaerobic bacteria, including Gram-positive bacteria of the human gut microbiome and Chloroflexi from marine sediments.


The actual alignment was detected with superfamily member NF033849:

Pssm-ID: 468206 [Multi-domain]  Cd Length: 1122  Bit Score: 85.83  E-value: 1.49e-16
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899  709 ARAQENadasTSVNFSRGAGTRA---GFSDGASISFNGAPSSSGGPGITFGGAPSSSASFSNTASISFGGTLSTSSSFSS 785
Cdd:NF033849   202 EAAAEE----TSNWASRQQGQKSisfGVSLPMMYAANLGQSAGTGYGESVGHSTSQGQSHSVGTSESHSVGTSQSQSHTT 277
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899  786 AASISFGGAPSTSTSFSSEASISfggtpctsASFSGGVSSSFSGPLNTSATFSGAASSGFGGTLSTTAGFSSVLSTSTSF 865
Cdd:NF033849   278 GHGSTRGWSHTQSTSESESTGQS--------SSVGTSESQSHGTTEGTSTTDSSSHSQSSSYNVSSGTGVSSSHSDGTSQ 349
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899  866 GSAPTTNTVFSSALSTSTGFGGTLSTSVCFGGSPSSSGSFGGTLSTSIcfGGSPCTSTGFGGTLSTSVSFGgpSSTSANc 945
Cdd:NF033849   350 STSISHSESSSESTGTSVGHSTSSSVSSSESSSRSSSSGVSGGFSGGI--AGGGVTSEGLGASQGGSEGWG--SGDSVQ- 424
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899  946 ggtlSTSICFDGSPSTGAGFGGALNTSASFGSAlnTSAGFGGAMSTSADFGSTLSTSVcfggspGTSVSFGSALNTSAGF 1025
Cdd:NF033849   425 ----SVSQSYGSSSSTGTSSGHSDSSSHSTSSG--QADSVSQGTSWSEGTGTSQGQSV------GTSESWSTSQSETDSV 492
                          330       340       350       360       370       380
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1026 GGAVSTSTDFGGTLSTSVCFGGSPSTSAGFSGALNTNASFgcaistSAGFSGAVGTSAGF 1085
Cdd:NF033849   493 GDSTGTSESVSQGDGRSTGRSESQGTSLGTSGGRTSGAGG------SMGLGPSISLGKSY 546
PPE super family cl35037
PPE-repeat protein [Function unknown];
1196-1414 5.29e-04

PPE-repeat protein [Function unknown];


The actual alignment was detected with superfamily member COG5651:

Pssm-ID: 444372 [Multi-domain]  Cd Length: 385  Bit Score: 44.11  E-value: 5.29e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1196 GNGLSTSAGFGGGLNTSAGFGgglgtSAGFSGDLSTSSGFDGGLGTSAGFSGGPGTSTGFGGGLGTSAGFSGGLGTGAGF 1275
Cdd:COG5651    178 GGLLGAQNAGSGNTSSNPGFA-----NLGLTGLNQVGIGGLNSGSGPIGLNSGPGNTGFAGTGAAAGAAAAAAAAAAAAG 252
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1276 GGGLVTSDGFGGGLGTNASFGSTLGTGAGFSGGLSTSDGFGSRPNASFDRGLSTIIGFGSGSNTSTGFIGEPSTSTGFHS 1355
Cdd:COG5651    253 AGASAALASLAATLLNASSLGLAATAASSAATNLGLAGSPLGLAGGGAGAAAATGLGLGAGGAAGAAGATGAGAALGAGA 332
                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|....*....
gi 1622971899 1356 GPSSIVGFSGGPSTGVGFCSGPSISGFSGGPSTGAGfgggpnTGAGFGGGPSTSAGFGS 1414
Cdd:COG5651    333 AAAAAGAAAGAGAAAAAAAGGAGGGGGGALGAGGGG------GSAGAAAGAASGGGAAA 385
 
Name Accession Description Interval E-value
ser_rich_anae_1 NF033849
serine-rich protein; This serine-rich protein belongs to a family with large size (over 1000 ...
927-1266 1.60e-23

serine-rich protein; This serine-rich protein belongs to a family with large size (over 1000 amino acids), which a highly serine-rich central region that averages over 300 aa in length. Species encoding members of this family of proteins tend to be anaerobic bacteria, including Gram-positive bacteria of the human gut microbiome and Chloroflexi from marine sediments.


Pssm-ID: 468206 [Multi-domain]  Cd Length: 1122  Bit Score: 108.55  E-value: 1.60e-23
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899  927 GTLSTSVSFGGPSSTSANCGGTLSTSIcfdgspSTGAGFGGALNTSASFGSALNTSAGFGGAMSTSADFGSTLSTSVCFG 1006
Cdd:NF033849   217 GQKSISFGVSLPMMYAANLGQSAGTGY------GESVGHSTSQGQSHSVGTSESHSVGTSQSQSHTTGHGSTRGWSHTQS 290
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1007 GSPGTSVSFGSALNTSAGFGGAVSTSTDFGGTLSTSVCFGGSPSTSAGFSGALNTNASFGCAISTSAGFSGAVGTSAGFS 1086
Cdd:NF033849   291 TSESESTGQSSSVGTSESQSHGTTEGTSTTDSSSHSQSSSYNVSSGTGVSSSHSDGTSQSTSISHSESSSESTGTSVGHS 370
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1087 GVPSTNPGFGGAFNTSAGFGGALSTTTDFGGTPNNSIGFGAAPSTSVSFG-GAHSTSLCFGGAPSTSLCFGSASNTnlcf 1165
Cdd:NF033849   371 TSSSVSSSESSSRSSSSGVSGGFSGGIAGGGVTSEGLGASQGGSEGWGSGdSVQSVSQSYGSSSSTGTSSGHSDSS---- 446
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1166 ggppSTSACFSGATSPSFGDGPSTSTGFSFGNGLSTSAGFGGGLNTSAGFGGGLGTSAGFSGDLSTSSGFDGGLGTSAGF 1245
Cdd:NF033849   447 ----SHSTSSGQADSVSQGTSWSEGTGTSQGQSVGTSESWSTSQSETDSVGDSTGTSESVSQGDGRSTGRSESQGTSLGT 522
                          330       340
                   ....*....|....*....|.
gi 1622971899 1246 SGGPGTSTGFGGGLGTSAGFS 1266
Cdd:NF033849   523 SGGRTSGAGGSMGLGPSISLG 543
MAGE pfam01454
MAGE homology domain; The MAGE (melanoma antigen-encoding gene) family are expressed in a wide ...
451-611 6.84e-23

MAGE homology domain; The MAGE (melanoma antigen-encoding gene) family are expressed in a wide variety of tumours but not in normal cells, with the exception of the male germ cells, placenta, and, possibly, cells of the developing embryo. The cellular function of this family is unknown. This family also contains the yeast protein, Nse3. The Nse3 protein is part of the Smc5-6 complex. Nse3 has been demonstrated to be important for meiosis.


Pssm-ID: 426270  Cd Length: 205  Bit Score: 98.11  E-value: 6.84e-23
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899  451 LVKYLLVKDQTKIPIKRSDMLRDVIQEYDE-YFPEIIERASYALEKMFRVNLKEID--------------------KQSS 509
Cdd:pfam01454    1 LVRYALACEYQRTPIRREDISKKVLGENRKrLFKKVFEEAQKILRDVFGMELVELPakeekkttvtsqqrraaaksSRSK 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899  510 LYILIST---RESSAGILGTTK---------DTPKLGLLMVILSVIFMNGNKASEAVIWEVLRKLGLH---PGVRHSLFG 574
Cdd:pfam01454   81 SYILVSTlppEYRVPAIIWPSKapsfvldqdEATYTGILTVILSLILLSGGSISEQELLRYLRRLGIDtdgTKEIPPLNG 160
                          170       180       190
                   ....*....|....*....|....*....|....*....
gi 1622971899  575 EVRKLItDEFVKQKYLEYKRVPNSRP--PEYEFFWGLRS 611
Cdd:pfam01454  161 NTDDLL-KRLVKQGYLVRTKEGASDDgeEIIEYRVGPRA 198
ser_rich_anae_1 NF033849
serine-rich protein; This serine-rich protein belongs to a family with large size (over 1000 ...
1060-1427 2.85e-21

serine-rich protein; This serine-rich protein belongs to a family with large size (over 1000 amino acids), which a highly serine-rich central region that averages over 300 aa in length. Species encoding members of this family of proteins tend to be anaerobic bacteria, including Gram-positive bacteria of the human gut microbiome and Chloroflexi from marine sediments.


Pssm-ID: 468206 [Multi-domain]  Cd Length: 1122  Bit Score: 101.24  E-value: 2.85e-21
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1060 NTNASFGcaISTSAGFSGAVGTSAGfsgvpstnPGFGGAFNTSAGFGGALSTTTDFGGTPNNSIGFGAAPSTSVSFGGAH 1139
Cdd:NF033849   218 QKSISFG--VSLPMMYAANLGQSAG--------TGYGESVGHSTSQGQSHSVGTSESHSVGTSQSQSHTTGHGSTRGWSH 287
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1140 STSLcfggapSTSLCFGSASNTnlcfggppSTSACFSGATSpsfgDGPSTSTGFSFGNGLSTSAGFGGGLNTSAGFGGGL 1219
Cdd:NF033849   288 TQST------SESESTGQSSSV--------GTSESQSHGTT----EGTSTTDSSSHSQSSSYNVSSGTGVSSSHSDGTSQ 349
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1220 GTSAGFSGDLSTSSGFDGGLGTSAGFSGGPGTSTGFGGGlgTSAGFSGGLGTGAgfggglVTSDGFGGGLGTNASFGSTL 1299
Cdd:NF033849   350 STSISHSESSSESTGTSVGHSTSSSVSSSESSSRSSSSG--VSGGFSGGIAGGG------VTSEGLGASQGGSEGWGSGD 421
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1300 GtGAGFSGGLSTSDGFGSRPNASFDRGLSTIIGFGSGSNTSTGFIGEPSTSTGFHSGPSSIVGFSGGPSTGVGFCSGPSI 1379
Cdd:NF033849   422 S-VQSVSQSYGSSSSTGTSSGHSDSSSHSTSSGQADSVSQGTSWSEGTGTSQGQSVGTSESWSTSQSETDSVGDSTGTSE 500
                          330       340       350       360
                   ....*....|....*....|....*....|....*....|....*...
gi 1622971899 1380 SgFSGGPSTGAGFGGGPNTGAGFGGGPSTSAGfgsGATSLGAcGFSYG 1427
Cdd:NF033849   501 S-VSQGDGRSTGRSESQGTSLGTSGGRTSGAG---GSMGLGP-SISLG 543
ser_rich_anae_1 NF033849
serine-rich protein; This serine-rich protein belongs to a family with large size (over 1000 ...
860-1226 4.39e-21

serine-rich protein; This serine-rich protein belongs to a family with large size (over 1000 amino acids), which a highly serine-rich central region that averages over 300 aa in length. Species encoding members of this family of proteins tend to be anaerobic bacteria, including Gram-positive bacteria of the human gut microbiome and Chloroflexi from marine sediments.


Pssm-ID: 468206 [Multi-domain]  Cd Length: 1122  Bit Score: 100.46  E-value: 4.39e-21
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899  860 STSTSFG-SAPTtntVFSSAL--STSTGFGGTLSTSVCFGGSPSSSGSFGGTLSTSICFGgspcTSTGFGGTLSTSVSFG 936
Cdd:NF033849   218 QKSISFGvSLPM---MYAANLgqSAGTGYGESVGHSTSQGQSHSVGTSESHSVGTSQSQS----HTTGHGSTRGWSHTQS 290
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899  937 GPSSTSANCGGTLSTSIcfdgspstgagfggALNTSASFGSALNTSAGFGGAMSTSADFGSTLSTSVCFGGSPGTSVSFG 1016
Cdd:NF033849   291 TSESESTGQSSSVGTSE--------------SQSHGTTEGTSTTDSSSHSQSSSYNVSSGTGVSSSHSDGTSQSTSISHS 356
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1017 SALNTSAGFGGAVSTSTDFGGTLSTSVCFggSPSTSAGFSGALNTNASFGCAISTSAGFSGAVGTSAGFSGVpSTNPGFG 1096
Cdd:NF033849   357 ESSSESTGTSVGHSTSSSVSSSESSSRSS--SSGVSGGFSGGIAGGGVTSEGLGASQGGSEGWGSGDSVQSV-SQSYGSS 433
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1097 GAFNTSAGfggaLSTTTDFGGTPNNSIGFGAAPSTSVSFGGAHSTSLCFGGAPSTSlcfgsasntnlcfgGPPSTSACFS 1176
Cdd:NF033849   434 SSTGTSSG----HSDSSSHSTSSGQADSVSQGTSWSEGTGTSQGQSVGTSESWSTS--------------QSETDSVGDS 495
                          330       340       350       360       370
                   ....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1177 GATSPSFGDGPSTSTGFSfgNGLSTSAGFGGGLNTSAGFGGGLGTSAGFS 1226
Cdd:NF033849   496 TGTSESVSQGDGRSTGRS--ESQGTSLGTSGGRTSGAGGSMGLGPSISLG 543
ser_rich_anae_1 NF033849
serine-rich protein; This serine-rich protein belongs to a family with large size (over 1000 ...
768-1086 7.78e-19

serine-rich protein; This serine-rich protein belongs to a family with large size (over 1000 amino acids), which a highly serine-rich central region that averages over 300 aa in length. Species encoding members of this family of proteins tend to be anaerobic bacteria, including Gram-positive bacteria of the human gut microbiome and Chloroflexi from marine sediments.


Pssm-ID: 468206 [Multi-domain]  Cd Length: 1122  Bit Score: 93.15  E-value: 7.78e-19
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899  768 TASISFGGTLSTSSSFSSAASISFGGAPSTSTSFSSEASISFGGTPCTSASFSGGVSSSFSGPLNTSATFSGAASSGFGG 847
Cdd:NF033849   218 QKSISFGVSLPMMYAANLGQSAGTGYGESVGHSTSQGQSHSVGTSESHSVGTSQSQSHTTGHGSTRGWSHTQSTSESEST 297
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899  848 TLSTTAGFSSVLSTSTSFGSAPTTNTVFSSALSTSTGFGGTLSTSVCFGGSPSSSGSFGGTLSTSICFGGSPCTSTGFGG 927
Cdd:NF033849   298 GQSSSVGTSESQSHGTTEGTSTTDSSSHSQSSSYNVSSGTGVSSSHSDGTSQSTSISHSESSSESTGTSVGHSTSSSVSS 377
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899  928 TLSTSVSFGgpSSTSANCGGTLStsicfdGSPSTGAGFGGALNTSASFGSA-----LNTSAGFGGAMSTSADFGSTLSTS 1002
Cdd:NF033849   378 SESSSRSSS--SGVSGGFSGGIA------GGGVTSEGLGASQGGSEGWGSGdsvqsVSQSYGSSSSTGTSSGHSDSSSHS 449
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1003 VCFGGSPGTSVSFGSALNTSAGFGGAVSTSTDFGGTLSTSVCFGGSPSTSAGFSGALNTNASFGCAISTSAGFSGAVGTS 1082
Cdd:NF033849   450 TSSGQADSVSQGTSWSEGTGTSQGQSVGTSESWSTSQSETDSVGDSTGTSESVSQGDGRSTGRSESQGTSLGTSGGRTSG 529

                   ....
gi 1622971899 1083 AGFS 1086
Cdd:NF033849   530 AGGS 533
ser_rich_anae_1 NF033849
serine-rich protein; This serine-rich protein belongs to a family with large size (over 1000 ...
709-1085 1.49e-16

serine-rich protein; This serine-rich protein belongs to a family with large size (over 1000 amino acids), which a highly serine-rich central region that averages over 300 aa in length. Species encoding members of this family of proteins tend to be anaerobic bacteria, including Gram-positive bacteria of the human gut microbiome and Chloroflexi from marine sediments.


Pssm-ID: 468206 [Multi-domain]  Cd Length: 1122  Bit Score: 85.83  E-value: 1.49e-16
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899  709 ARAQENadasTSVNFSRGAGTRA---GFSDGASISFNGAPSSSGGPGITFGGAPSSSASFSNTASISFGGTLSTSSSFSS 785
Cdd:NF033849   202 EAAAEE----TSNWASRQQGQKSisfGVSLPMMYAANLGQSAGTGYGESVGHSTSQGQSHSVGTSESHSVGTSQSQSHTT 277
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899  786 AASISFGGAPSTSTSFSSEASISfggtpctsASFSGGVSSSFSGPLNTSATFSGAASSGFGGTLSTTAGFSSVLSTSTSF 865
Cdd:NF033849   278 GHGSTRGWSHTQSTSESESTGQS--------SSVGTSESQSHGTTEGTSTTDSSSHSQSSSYNVSSGTGVSSSHSDGTSQ 349
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899  866 GSAPTTNTVFSSALSTSTGFGGTLSTSVCFGGSPSSSGSFGGTLSTSIcfGGSPCTSTGFGGTLSTSVSFGgpSSTSANc 945
Cdd:NF033849   350 STSISHSESSSESTGTSVGHSTSSSVSSSESSSRSSSSGVSGGFSGGI--AGGGVTSEGLGASQGGSEGWG--SGDSVQ- 424
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899  946 ggtlSTSICFDGSPSTGAGFGGALNTSASFGSAlnTSAGFGGAMSTSADFGSTLSTSVcfggspGTSVSFGSALNTSAGF 1025
Cdd:NF033849   425 ----SVSQSYGSSSSTGTSSGHSDSSSHSTSSG--QADSVSQGTSWSEGTGTSQGQSV------GTSESWSTSQSETDSV 492
                          330       340       350       360       370       380
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1026 GGAVSTSTDFGGTLSTSVCFGGSPSTSAGFSGALNTNASFgcaistSAGFSGAVGTSAGF 1085
Cdd:NF033849   493 GDSTGTSESVSQGDGRSTGRSESQGTSLGTSGGRTSGAGG------SMGLGPSISLGKSY 546
ser_rich_anae_1 NF033849
serine-rich protein; This serine-rich protein belongs to a family with large size (over 1000 ...
713-1086 2.48e-16

serine-rich protein; This serine-rich protein belongs to a family with large size (over 1000 amino acids), which a highly serine-rich central region that averages over 300 aa in length. Species encoding members of this family of proteins tend to be anaerobic bacteria, including Gram-positive bacteria of the human gut microbiome and Chloroflexi from marine sediments.


Pssm-ID: 468206 [Multi-domain]  Cd Length: 1122  Bit Score: 85.06  E-value: 2.48e-16
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899  713 ENADASTSVNFSRGAGTRAGFSDGASISFngapSSSGGPGITFGGAPSSSASFSNTASISfggtlstsSSFSSAASISFG 792
Cdd:NF033849   245 ESVGHSTSQGQSHSVGTSESHSVGTSQSQ----SHTTGHGSTRGWSHTQSTSESESTGQS--------SSVGTSESQSHG 312
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899  793 GAPSTSTSFSSEASISFGGTPCTSASFsggvsssfsgplNTSATFSGAASSGFGGTLSTTAGFSSVLSTSTSFGSAPTTN 872
Cdd:NF033849   313 TTEGTSTTDSSSHSQSSSYNVSSGTGV------------SSSHSDGTSQSTSISHSESSSESTGTSVGHSTSSSVSSSES 380
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899  873 TVFSSALSTSTGFGGTLstsvcfggspsssgsfggtlstsicfGGSPCTSTGFGGTLSTSVSFGgpSStsancggtlsts 952
Cdd:NF033849   381 SSRSSSSGVSGGFSGGI--------------------------AGGGVTSEGLGASQGGSEGWG--SG------------ 420
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899  953 icfDGSPSTGAGFGGALNTSASFGSALNTSagfggaMSTSADFGSTLSTSVcfGGSPGTSVSFGSALNTSAGFGGAVSTS 1032
Cdd:NF033849   421 ---DSVQSVSQSYGSSSSTGTSSGHSDSSS------HSTSSGQADSVSQGT--SWSEGTGTSQGQSVGTSESWSTSQSET 489
                          330       340       350       360       370
                   ....*....|....*....|....*....|....*....|....*....|....
gi 1622971899 1033 TDFGGTLSTSVCFGGSPSTSAGFSGALNTNASFGCAISTSAGFSGAVGTSAGFS 1086
Cdd:NF033849   490 DSVGDSTGTSESVSQGDGRSTGRSESQGTSLGTSGGRTSGAGGSMGLGPSISLG 543
FhaB COG3210
Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, ...
704-1421 1.90e-15

Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 442443 [Multi-domain]  Cd Length: 1698  Bit Score: 82.51  E-value: 1.90e-15
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899  704 SFEIEARAQENADASTSVNFSRGAGTRAGFSDGASISFNGAPSSSGGPGITFGGAPSSSASFSNTASISFGGTLSTSSSF 783
Cdd:COG3210    795 SIDITADGTITAAGTTAINVTGSGGTITINTATTGLTGTGDTTSGAGGSNTTDTTTGTTSDGASGGGTAGANSGSLAATA 874
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899  784 SSAASISFGGAPSTSTSFSSEASISFGGTPCTSASFSGGVSSSFSGPLNTSATFSGAASSGFGGTLSTTAGFSSVLSTST 863
Cdd:COG3210    875 ASITVGSGGVATSTGTANAGTLTNLGTTTNAASGNGAVLATVTATGTGGGGLTGGNAAAGGTGAGNGTTALSGTQGNAGL 954
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899  864 SFGSAPTTNTVFSSALSTSTGFGGTLSTSVCFGGSPSSSGSFGGTLSTSICFGGSPCTSTGFGGTLSTSVSFGGPSSTSA 943
Cdd:COG3210    955 SAASASDGAGDTGASSAAGSSAVGTSANSAGSTGGVIAATGILVAGNSGTTASTTGGSGAIVAGGNGVTGTTGTASATGT 1034
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899  944 NCGGTLSTSICFDGSPSTGAGFGGALNTSASFGSALNTSAGFGGAMSTSADFGSTLSTSVCFGGSPGTSVSFGSALNTSA 1023
Cdd:COG3210   1035 GTAATAGGQNGVGVNASGISGGNAAALTASGTAGTTGGTAASNGGGGTAQASGAGTTHTLGGITNGGATGTSGGTTTSTG 1114
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1024 GFGGAVSTSTDFGGTLSTSVCFGGSPSTSAGFSGALNTNASFGCAISTSAGFSGAVGTSAGFSGVPSTNPGFGGAFNTSA 1103
Cdd:COG3210   1115 GVTASKVGGTTTVGATGTSTASTEAAGAGTLTGLVAVSAVAGGASSASAGDTTAVAAATTTTTGSAINGGADSAATEGTA 1194
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1104 GFGGALSTTTDFGGTPNNSIGFGAAPSTSVSFGGAHSTSLCFGGAPSTSLCFGSASNTNLCFGGPPSTSACFSGATSPSF 1183
Cdd:COG3210   1195 GTDLKGGDSTGGSTTTIGTTNVTTTTTLTASDTGNTTATGGSSAGQTGSFVAAGSASGTGDATTGATAGAVSNGATSTVA 1274
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1184 GDGPSTSTGFSFGNGLSTSAGFGGGLNTSAGFGGGLGTSAGFSGDLSTSSGFDGGLGTSAGFSGGPGTSTGFGGGLGTSA 1263
Cdd:COG3210   1275 GNAGATATGSTVDIGSTSATSAGGSLDTTGNTAGANGATVGTGIGGTTATGTAVAAVNSGGVNAGGGTINTTAANTGLNG 1354
                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1264 GFSGGLGTGAGFGGGLVTSDGFGGGLGTNASFGSTLGTGAGFSGGLSTSDGFGSRPNASFDRGLSTIIGFGSGSNTSTGF 1343
Cdd:COG3210   1355 GNGATDSAAGAGSGGAAGSLAATAGAGTVLTGAGNNTGAEGTNAGRDGGVTTSGTGVGNNGGVSGTTVAGTTGSSATTGT 1434
                          650       660       670       680       690       700       710
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1622971899 1344 IGEPSTSTGFHSGPSSIVGFSGGPSTGVGFCSGPSISGFSGGPSTGAGFGGGPNTGAGFGGGPSTSAGFGSGATSLGA 1421
Cdd:COG3210   1435 GGTGNTTGTSVAGAGGGNADASAINTGNASSLGAGGSTAGNAVGGAVIGGTTTGGNGAGVAGATASNGGTSTGAGGTA 1512
FhaB COG3210
Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, ...
714-1341 8.27e-12

Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 442443 [Multi-domain]  Cd Length: 1698  Bit Score: 70.57  E-value: 8.27e-12
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899  714 NADASTSVNFSRGAGTRAGFSDGASISFNGAPSSSGGPGITFGGAPSSSASFSNTASISFGGTLSTSSSFSSAASISFGG 793
Cdd:COG3210    119 TAASATTGNNTGGTTTSSTNTVTTLGGTTTGNTVLSTSGAGNNTNTNNSSSGTNIGNSIPTTGGSLNVVAANPTGVTGVG 198
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899  794 APSTSTSFSSEASISFGGTPCTSASFSGGVSSSFSGPLNTSATFSGAASSGFGGTLSTTAGFSSVLSTSTSFGSAPTTNT 873
Cdd:COG3210    199 GALINATAGVLANAGGGTAGGVASANSTLTGGVVAAGTGAGVISTGGTDISSLSVAAGAGTGGAGGTGNAGNTTIGTTVT 278
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899  874 VFSSALSTSTGFGGTLSTSVCFGGSPSSSGSFGGTLSTSICFGGSPCTSTGFGGTLSTSVSFGGPSSTSANCGGTLSTSI 953
Cdd:COG3210    279 GTNATGSNTAGASSGDTTTNGTSSVTGAGGTGVLGGGTAAGITTTNTVGGNGDGNNTTANSGAGLVSGGTGGNNGTTGTG 358
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899  954 CFDGSPSTGAGFGGALNTSASFGSALNTSAGFGGAMSTSADFGSTLSTSVCFGGSPGTSVSFGSALNTSAGFGGAVSTST 1033
Cdd:COG3210    359 AGSGLTGTGNGGGLTTAGAGTVASTVGTATASTGNASSTTVLGSGSLATGNTGTTIAGNGGSANAGGFTTTGGVLGITGN 438
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1034 DFGGTLSTSVCFGGSPSTSAGFSGALNTNASfgcaisTSAGFSGAVGTSAGFSGVPSTNPGFGGAFNTSAGFGGALSTTT 1113
Cdd:COG3210    439 GTVTGGTIGGLTGSGTTNGAGLSGNTDVSGT------GTVTNSAGNTTSATTLAGGGIGTVTTNATISNNAGGDANGIAT 512
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1114 DFGGTPNNSIGFGAAPSTSVSFGGAHSTSLCFGGAPSTSLCFGSASNTNLCFGGPPSTSACFSGATSPSFGDGPSTSTGF 1193
Cdd:COG3210    513 GLTGITAGGGGGGNATSGGTGGDGTTLSGSGLTTTVSGGASGTTAASGSNTANTLGVLAATGGTSNATTAGNSTSATGGT 592
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1194 SFGNGLSTSAGFGGGLNTSAGFGGGLGTSAGFSGDLSTSSGFDGGLGTSAGFSGGPGTSTGFGGGLGTSAGFSGGLGTGA 1273
Cdd:COG3210    593 GTNSGGTVLSIGTGSAGATGTITLGAGTSGAGANATGGGAGLTGSAVGAALSGTGSGTTGTASANGSNTTGVNTAGGTGG 672
                          570       580       590       600       610       620
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1622971899 1274 GFGGGLVTSDGFGGGLGTNASFGSTLGTGAGFSGGLSTSDGFGSRPNASFDRGLSTIIGFGSGSNTST 1341
Cdd:COG3210    673 GTTGTVTSGATGGTTGTTLNAATGGTLNNAGNTLTISTGSITVTGQIGALANANGDTVTFGNLGTGAT 740
PTZ00395 PTZ00395
Sec24-related protein; Provisional
1005-1227 6.61e-08

Sec24-related protein; Provisional


Pssm-ID: 185594 [Multi-domain]  Cd Length: 1560  Bit Score: 57.78  E-value: 6.61e-08
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1005 FGGSPGTSVSFGSALNTSAGFGGAVStstdfGGTLSTSvcfggSPSTSAGFSGALNTNASFGCAISTSAGFSGAVGTSAG 1084
Cdd:PTZ00395   339 YGGFHDGSPNAASAGAPFNGLGNQAD-----GGHINQV-----HPDARGAWAGGPHSNASYNCAAYSNAAQSNAAQSNAG 408
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1085 FSGVPSTNPGfggafNTSAGFGGALSTTTDFGGTPNNSIGFGAAPSTSVSFGGAHSTSLCFGGAPSTSLCFGSASNTNLC 1164
Cdd:PTZ00395   409 FSNAGYSNPG-----NSNPGYNNAPNSNTPYNNPPNSNTPYSNPPNSNPPYSNLPYSNTPYSNAPLSNAPPSSAKDHHSA 483
                          170       180       190       200       210       220
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1622971899 1165 FggppSTSACFSGATSPSfGDGP----STSTGFSFGNGLSTSAGFGGGLNTSAGFGGGLGTSAGFSG 1227
Cdd:PTZ00395   484 Y----HAAYQHRAANQPA-ANLPtanqPAANNFHGAAGNSVGNPFASRPFGSAPYGGNAATTADPNG 545
Nucleoporin_FG2 pfam15967
Nucleoporin FG repeated region; Nucleoporin_FG2, or nucleoporin p58/p45, is a family of ...
1066-1263 1.71e-06

Nucleoporin FG repeated region; Nucleoporin_FG2, or nucleoporin p58/p45, is a family of chordate nucleoporins. The proteins carry many repeats of the FG sequence motif.


Pssm-ID: 435043 [Multi-domain]  Cd Length: 586  Bit Score: 52.36  E-value: 1.71e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1066 GCAISTSAGFSGAVGTSAGFSGVPSTNPGFGGAFntsaGFGGALSTTTDFGGTPNNSIGFGAAPstsvsFGGAHSTSLCF 1145
Cdd:pfam15967    3 GFSFGGGPGSTATAGGGFSFGAAAASNPGSTGGF----SFGTLGAAPAATATTTTATLGLGGGL-----FGQKPATGFTF 73
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1146 GGAPSTSlcfGSASNTNLCFGGPPSTSACFSG-----------ATSPSFGDGPSTSTGFSFGNGLSTSAGFGGGLNTSAG 1214
Cdd:pfam15967   74 GTPASST---AATGPTGLTLGTPAATTAASTGfslgfnkpaasATPFSLPASSTSGGGLSLGSVLTSTAAQQGATGFTLN 150
                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|..
gi 1622971899 1215 FGGGLGTSAGFSGDL---STSSGFDGGLGTSAGFSGGPGTSTGFGGGLGTSA 1263
Cdd:pfam15967  151 LGGTPATTTAVSTGLslgSTLTSLGGSLFQNTNSTGLGQTTLGLTLLATSTA 202
Nucleoporin_FG2 pfam15967
Nucleoporin FG repeated region; Nucleoporin_FG2, or nucleoporin p58/p45, is a family of ...
723-927 1.19e-04

Nucleoporin FG repeated region; Nucleoporin_FG2, or nucleoporin p58/p45, is a family of chordate nucleoporins. The proteins carry many repeats of the FG sequence motif.


Pssm-ID: 435043 [Multi-domain]  Cd Length: 586  Bit Score: 46.58  E-value: 1.19e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899  723 FSRGAGTRAGFSDGASISFNGAPSS----SGGPGI-TFGGAPSSSASfSNTASISFGGTLSTSSSFSSAASisfgGAPST 797
Cdd:pfam15967    4 FSFGGGPGSTATAGGGFSFGAAAASnpgsTGGFSFgTLGAAPAATAT-TTTATLGLGGGLFGQKPATGFTF----GTPAS 78
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899  798 STSFSSEASISfGGTPCTSASFSGGVSSSFSGPLNTSATFSGAASSGFGGTLSttagFSSVLSTSTS----------FGS 867
Cdd:pfam15967   79 STAATGPTGLT-LGTPAATTAASTGFSLGFNKPAASATPFSLPASSTSGGGLS----LGSVLTSTAAqqgatgftlnLGG 153
                          170       180       190       200       210       220
                   ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1622971899  868 APTTNTVFSSAL---STSTGFGGTLSTSVcFGGSPSSSGSFGGTLSTSICFGGSPCTSTGFGG 927
Cdd:pfam15967  154 TPATTTAVSTGLslgSTLTSLGGSLFQNT-NSTGLGQTTLGLTLLATSTAPVSAPAASEGLGG 215
PPE COG5651
PPE-repeat protein [Function unknown];
1196-1414 5.29e-04

PPE-repeat protein [Function unknown];


Pssm-ID: 444372 [Multi-domain]  Cd Length: 385  Bit Score: 44.11  E-value: 5.29e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1196 GNGLSTSAGFGGGLNTSAGFGgglgtSAGFSGDLSTSSGFDGGLGTSAGFSGGPGTSTGFGGGLGTSAGFSGGLGTGAGF 1275
Cdd:COG5651    178 GGLLGAQNAGSGNTSSNPGFA-----NLGLTGLNQVGIGGLNSGSGPIGLNSGPGNTGFAGTGAAAGAAAAAAAAAAAAG 252
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1276 GGGLVTSDGFGGGLGTNASFGSTLGTGAGFSGGLSTSDGFGSRPNASFDRGLSTIIGFGSGSNTSTGFIGEPSTSTGFHS 1355
Cdd:COG5651    253 AGASAALASLAATLLNASSLGLAATAASSAATNLGLAGSPLGLAGGGAGAAAATGLGLGAGGAAGAAGATGAGAALGAGA 332
                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|....*....
gi 1622971899 1356 GPSSIVGFSGGPSTGVGFCSGPSISGFSGGPSTGAGfgggpnTGAGFGGGPSTSAGFGS 1414
Cdd:COG5651    333 AAAAAGAAAGAGAAAAAAAGGAGGGGGGALGAGGGG------GSAGAAAGAASGGGAAA 385
dermokine cd21118
dermokine; Dermokine, also known as epidermis-specific secreted protein SK30/SK89, is a ...
1217-1420 3.79e-03

dermokine; Dermokine, also known as epidermis-specific secreted protein SK30/SK89, is a skin-specific glycoprotein that may play a regulatory role in the crosstalk between barrier dysfunction and inflammation, and therefore play a role in inflammatory diseases such as psoriasis. Dermokine is one of the most highly expressed proteins in differentiating keratinocytes, found mainly in the spinous and granular layers of the epidermis, but also in the epithelia of the small intestine, macrophages of the lung, and endothelial cells of the lung. Mouse dermokine has been reported to be encoded by 22 exons, and its expression leads to alpha, beta, and gamma transcripts.


Pssm-ID: 411053 [Multi-domain]  Cd Length: 495  Bit Score: 41.52  E-value: 3.79e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1217 GGLGTSAGFSGDLSTSSGFDGGLGTSaGFSGGPGTSTGFGGGLGTsaGFSGGLGTGAGFGGGLVTSDGFGGGLGTNASFG 1296
Cdd:cd21118    125 GGHGAYGSQGGPGVQGHGIPGGTGGP-WASGGNYGTNSLGGSVGQ--GGNGGPLNYGTNSQGAVAQPGYGTVRGNNQNSG 201
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1297 STLGTGAGFSGGLSTSDGfGSRPNASFDRGLSTIIGFGSGSNTSTGFIGEPSTSTGFHSGPSSivGFSGGPSTGVGFCSG 1376
Cdd:cd21118    202 CTNPPPSGSHESFSNSGG-SSSSGSSGSQGSHGSNGQGSSGSSGGQGNGGNNGSSSSNSGNSG--GSNGGSSGNSGSGSG 278
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|....*..
gi 1622971899 1377 PSISGFSGGPSTGAGFGGGPNTGAGFG---GGPSTSAGFGSGATSLG 1420
Cdd:cd21118    279 GSSSGGSNGWGGSSSSGGSGGSGGGNKpecNNPGNDVRMAGGGGSQG 325
Nucleoporin_FG2 pfam15967
Nucleoporin FG repeated region; Nucleoporin_FG2, or nucleoporin p58/p45, is a family of ...
1191-1427 4.05e-03

Nucleoporin FG repeated region; Nucleoporin_FG2, or nucleoporin p58/p45, is a family of chordate nucleoporins. The proteins carry many repeats of the FG sequence motif.


Pssm-ID: 435043 [Multi-domain]  Cd Length: 586  Bit Score: 41.58  E-value: 4.05e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1191 TGFSFGNGLSTSAGFGGGLNTSAGFGGGLGTSAGFsgdlstssGFDGGLGTSAGFSGGPGTSTGFGGGL---GTSAGFSg 1267
Cdd:pfam15967    2 SGFSFGGGPGSTATAGGGFSFGAAAASNPGSTGGF--------SFGTLGAAPAATATTTTATLGLGGGLfgqKPATGFT- 72
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1268 glgtgagfggglvtsdgFGGGLGTNASFGSTLGTGAGFSGGLSTSDGFG---SRPNAS---FDRGLSTIIGFGSGSNTST 1341
Cdd:pfam15967   73 -----------------FGTPASSTAATGPTGLTLGTPAATTAASTGFSlgfNKPAASatpFSLPASSTSGGGLSLGSVL 135
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1342 GFIGEPSTSTGFHSGPSSIVGFSGGPSTGVGFcsGPSISGFSGGPSTGAGFGGGPNTGAGFGGGPSTSAGFGSGATSLGA 1421
Cdd:pfam15967  136 TSTAAQQGATGFTLNLGGTPATTTAVSTGLSL--GSTLTSLGGSLFQNTNSTGLGQTTLGLTLLATSTAPVSAPAASEGL 213

                   ....*.
gi 1622971899 1422 CGFSYG 1427
Cdd:pfam15967  214 GGLDFS 219
 
Name Accession Description Interval E-value
ser_rich_anae_1 NF033849
serine-rich protein; This serine-rich protein belongs to a family with large size (over 1000 ...
927-1266 1.60e-23

serine-rich protein; This serine-rich protein belongs to a family with large size (over 1000 amino acids), which a highly serine-rich central region that averages over 300 aa in length. Species encoding members of this family of proteins tend to be anaerobic bacteria, including Gram-positive bacteria of the human gut microbiome and Chloroflexi from marine sediments.


Pssm-ID: 468206 [Multi-domain]  Cd Length: 1122  Bit Score: 108.55  E-value: 1.60e-23
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899  927 GTLSTSVSFGGPSSTSANCGGTLSTSIcfdgspSTGAGFGGALNTSASFGSALNTSAGFGGAMSTSADFGSTLSTSVCFG 1006
Cdd:NF033849   217 GQKSISFGVSLPMMYAANLGQSAGTGY------GESVGHSTSQGQSHSVGTSESHSVGTSQSQSHTTGHGSTRGWSHTQS 290
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1007 GSPGTSVSFGSALNTSAGFGGAVSTSTDFGGTLSTSVCFGGSPSTSAGFSGALNTNASFGCAISTSAGFSGAVGTSAGFS 1086
Cdd:NF033849   291 TSESESTGQSSSVGTSESQSHGTTEGTSTTDSSSHSQSSSYNVSSGTGVSSSHSDGTSQSTSISHSESSSESTGTSVGHS 370
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1087 GVPSTNPGFGGAFNTSAGFGGALSTTTDFGGTPNNSIGFGAAPSTSVSFG-GAHSTSLCFGGAPSTSLCFGSASNTnlcf 1165
Cdd:NF033849   371 TSSSVSSSESSSRSSSSGVSGGFSGGIAGGGVTSEGLGASQGGSEGWGSGdSVQSVSQSYGSSSSTGTSSGHSDSS---- 446
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1166 ggppSTSACFSGATSPSFGDGPSTSTGFSFGNGLSTSAGFGGGLNTSAGFGGGLGTSAGFSGDLSTSSGFDGGLGTSAGF 1245
Cdd:NF033849   447 ----SHSTSSGQADSVSQGTSWSEGTGTSQGQSVGTSESWSTSQSETDSVGDSTGTSESVSQGDGRSTGRSESQGTSLGT 522
                          330       340
                   ....*....|....*....|.
gi 1622971899 1246 SGGPGTSTGFGGGLGTSAGFS 1266
Cdd:NF033849   523 SGGRTSGAGGSMGLGPSISLG 543
MAGE pfam01454
MAGE homology domain; The MAGE (melanoma antigen-encoding gene) family are expressed in a wide ...
451-611 6.84e-23

MAGE homology domain; The MAGE (melanoma antigen-encoding gene) family are expressed in a wide variety of tumours but not in normal cells, with the exception of the male germ cells, placenta, and, possibly, cells of the developing embryo. The cellular function of this family is unknown. This family also contains the yeast protein, Nse3. The Nse3 protein is part of the Smc5-6 complex. Nse3 has been demonstrated to be important for meiosis.


Pssm-ID: 426270  Cd Length: 205  Bit Score: 98.11  E-value: 6.84e-23
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899  451 LVKYLLVKDQTKIPIKRSDMLRDVIQEYDE-YFPEIIERASYALEKMFRVNLKEID--------------------KQSS 509
Cdd:pfam01454    1 LVRYALACEYQRTPIRREDISKKVLGENRKrLFKKVFEEAQKILRDVFGMELVELPakeekkttvtsqqrraaaksSRSK 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899  510 LYILIST---RESSAGILGTTK---------DTPKLGLLMVILSVIFMNGNKASEAVIWEVLRKLGLH---PGVRHSLFG 574
Cdd:pfam01454   81 SYILVSTlppEYRVPAIIWPSKapsfvldqdEATYTGILTVILSLILLSGGSISEQELLRYLRRLGIDtdgTKEIPPLNG 160
                          170       180       190
                   ....*....|....*....|....*....|....*....
gi 1622971899  575 EVRKLItDEFVKQKYLEYKRVPNSRP--PEYEFFWGLRS 611
Cdd:pfam01454  161 NTDDLL-KRLVKQGYLVRTKEGASDDgeEIIEYRVGPRA 198
ser_rich_anae_1 NF033849
serine-rich protein; This serine-rich protein belongs to a family with large size (over 1000 ...
1060-1427 2.85e-21

serine-rich protein; This serine-rich protein belongs to a family with large size (over 1000 amino acids), which a highly serine-rich central region that averages over 300 aa in length. Species encoding members of this family of proteins tend to be anaerobic bacteria, including Gram-positive bacteria of the human gut microbiome and Chloroflexi from marine sediments.


Pssm-ID: 468206 [Multi-domain]  Cd Length: 1122  Bit Score: 101.24  E-value: 2.85e-21
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1060 NTNASFGcaISTSAGFSGAVGTSAGfsgvpstnPGFGGAFNTSAGFGGALSTTTDFGGTPNNSIGFGAAPSTSVSFGGAH 1139
Cdd:NF033849   218 QKSISFG--VSLPMMYAANLGQSAG--------TGYGESVGHSTSQGQSHSVGTSESHSVGTSQSQSHTTGHGSTRGWSH 287
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1140 STSLcfggapSTSLCFGSASNTnlcfggppSTSACFSGATSpsfgDGPSTSTGFSFGNGLSTSAGFGGGLNTSAGFGGGL 1219
Cdd:NF033849   288 TQST------SESESTGQSSSV--------GTSESQSHGTT----EGTSTTDSSSHSQSSSYNVSSGTGVSSSHSDGTSQ 349
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1220 GTSAGFSGDLSTSSGFDGGLGTSAGFSGGPGTSTGFGGGlgTSAGFSGGLGTGAgfggglVTSDGFGGGLGTNASFGSTL 1299
Cdd:NF033849   350 STSISHSESSSESTGTSVGHSTSSSVSSSESSSRSSSSG--VSGGFSGGIAGGG------VTSEGLGASQGGSEGWGSGD 421
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1300 GtGAGFSGGLSTSDGFGSRPNASFDRGLSTIIGFGSGSNTSTGFIGEPSTSTGFHSGPSSIVGFSGGPSTGVGFCSGPSI 1379
Cdd:NF033849   422 S-VQSVSQSYGSSSSTGTSSGHSDSSSHSTSSGQADSVSQGTSWSEGTGTSQGQSVGTSESWSTSQSETDSVGDSTGTSE 500
                          330       340       350       360
                   ....*....|....*....|....*....|....*....|....*...
gi 1622971899 1380 SgFSGGPSTGAGFGGGPNTGAGFGGGPSTSAGfgsGATSLGAcGFSYG 1427
Cdd:NF033849   501 S-VSQGDGRSTGRSESQGTSLGTSGGRTSGAG---GSMGLGP-SISLG 543
ser_rich_anae_1 NF033849
serine-rich protein; This serine-rich protein belongs to a family with large size (over 1000 ...
860-1226 4.39e-21

serine-rich protein; This serine-rich protein belongs to a family with large size (over 1000 amino acids), which a highly serine-rich central region that averages over 300 aa in length. Species encoding members of this family of proteins tend to be anaerobic bacteria, including Gram-positive bacteria of the human gut microbiome and Chloroflexi from marine sediments.


Pssm-ID: 468206 [Multi-domain]  Cd Length: 1122  Bit Score: 100.46  E-value: 4.39e-21
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899  860 STSTSFG-SAPTtntVFSSAL--STSTGFGGTLSTSVCFGGSPSSSGSFGGTLSTSICFGgspcTSTGFGGTLSTSVSFG 936
Cdd:NF033849   218 QKSISFGvSLPM---MYAANLgqSAGTGYGESVGHSTSQGQSHSVGTSESHSVGTSQSQS----HTTGHGSTRGWSHTQS 290
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899  937 GPSSTSANCGGTLSTSIcfdgspstgagfggALNTSASFGSALNTSAGFGGAMSTSADFGSTLSTSVCFGGSPGTSVSFG 1016
Cdd:NF033849   291 TSESESTGQSSSVGTSE--------------SQSHGTTEGTSTTDSSSHSQSSSYNVSSGTGVSSSHSDGTSQSTSISHS 356
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1017 SALNTSAGFGGAVSTSTDFGGTLSTSVCFggSPSTSAGFSGALNTNASFGCAISTSAGFSGAVGTSAGFSGVpSTNPGFG 1096
Cdd:NF033849   357 ESSSESTGTSVGHSTSSSVSSSESSSRSS--SSGVSGGFSGGIAGGGVTSEGLGASQGGSEGWGSGDSVQSV-SQSYGSS 433
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1097 GAFNTSAGfggaLSTTTDFGGTPNNSIGFGAAPSTSVSFGGAHSTSLCFGGAPSTSlcfgsasntnlcfgGPPSTSACFS 1176
Cdd:NF033849   434 SSTGTSSG----HSDSSSHSTSSGQADSVSQGTSWSEGTGTSQGQSVGTSESWSTS--------------QSETDSVGDS 495
                          330       340       350       360       370
                   ....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1177 GATSPSFGDGPSTSTGFSfgNGLSTSAGFGGGLNTSAGFGGGLGTSAGFS 1226
Cdd:NF033849   496 TGTSESVSQGDGRSTGRS--ESQGTSLGTSGGRTSGAGGSMGLGPSISLG 543
ser_rich_anae_1 NF033849
serine-rich protein; This serine-rich protein belongs to a family with large size (over 1000 ...
768-1086 7.78e-19

serine-rich protein; This serine-rich protein belongs to a family with large size (over 1000 amino acids), which a highly serine-rich central region that averages over 300 aa in length. Species encoding members of this family of proteins tend to be anaerobic bacteria, including Gram-positive bacteria of the human gut microbiome and Chloroflexi from marine sediments.


Pssm-ID: 468206 [Multi-domain]  Cd Length: 1122  Bit Score: 93.15  E-value: 7.78e-19
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899  768 TASISFGGTLSTSSSFSSAASISFGGAPSTSTSFSSEASISFGGTPCTSASFSGGVSSSFSGPLNTSATFSGAASSGFGG 847
Cdd:NF033849   218 QKSISFGVSLPMMYAANLGQSAGTGYGESVGHSTSQGQSHSVGTSESHSVGTSQSQSHTTGHGSTRGWSHTQSTSESEST 297
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899  848 TLSTTAGFSSVLSTSTSFGSAPTTNTVFSSALSTSTGFGGTLSTSVCFGGSPSSSGSFGGTLSTSICFGGSPCTSTGFGG 927
Cdd:NF033849   298 GQSSSVGTSESQSHGTTEGTSTTDSSSHSQSSSYNVSSGTGVSSSHSDGTSQSTSISHSESSSESTGTSVGHSTSSSVSS 377
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899  928 TLSTSVSFGgpSSTSANCGGTLStsicfdGSPSTGAGFGGALNTSASFGSA-----LNTSAGFGGAMSTSADFGSTLSTS 1002
Cdd:NF033849   378 SESSSRSSS--SGVSGGFSGGIA------GGGVTSEGLGASQGGSEGWGSGdsvqsVSQSYGSSSSTGTSSGHSDSSSHS 449
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1003 VCFGGSPGTSVSFGSALNTSAGFGGAVSTSTDFGGTLSTSVCFGGSPSTSAGFSGALNTNASFGCAISTSAGFSGAVGTS 1082
Cdd:NF033849   450 TSSGQADSVSQGTSWSEGTGTSQGQSVGTSESWSTSQSETDSVGDSTGTSESVSQGDGRSTGRSESQGTSLGTSGGRTSG 529

                   ....
gi 1622971899 1083 AGFS 1086
Cdd:NF033849   530 AGGS 533
ser_rich_anae_1 NF033849
serine-rich protein; This serine-rich protein belongs to a family with large size (over 1000 ...
709-1085 1.49e-16

serine-rich protein; This serine-rich protein belongs to a family with large size (over 1000 amino acids), which a highly serine-rich central region that averages over 300 aa in length. Species encoding members of this family of proteins tend to be anaerobic bacteria, including Gram-positive bacteria of the human gut microbiome and Chloroflexi from marine sediments.


Pssm-ID: 468206 [Multi-domain]  Cd Length: 1122  Bit Score: 85.83  E-value: 1.49e-16
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899  709 ARAQENadasTSVNFSRGAGTRA---GFSDGASISFNGAPSSSGGPGITFGGAPSSSASFSNTASISFGGTLSTSSSFSS 785
Cdd:NF033849   202 EAAAEE----TSNWASRQQGQKSisfGVSLPMMYAANLGQSAGTGYGESVGHSTSQGQSHSVGTSESHSVGTSQSQSHTT 277
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899  786 AASISFGGAPSTSTSFSSEASISfggtpctsASFSGGVSSSFSGPLNTSATFSGAASSGFGGTLSTTAGFSSVLSTSTSF 865
Cdd:NF033849   278 GHGSTRGWSHTQSTSESESTGQS--------SSVGTSESQSHGTTEGTSTTDSSSHSQSSSYNVSSGTGVSSSHSDGTSQ 349
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899  866 GSAPTTNTVFSSALSTSTGFGGTLSTSVCFGGSPSSSGSFGGTLSTSIcfGGSPCTSTGFGGTLSTSVSFGgpSSTSANc 945
Cdd:NF033849   350 STSISHSESSSESTGTSVGHSTSSSVSSSESSSRSSSSGVSGGFSGGI--AGGGVTSEGLGASQGGSEGWG--SGDSVQ- 424
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899  946 ggtlSTSICFDGSPSTGAGFGGALNTSASFGSAlnTSAGFGGAMSTSADFGSTLSTSVcfggspGTSVSFGSALNTSAGF 1025
Cdd:NF033849   425 ----SVSQSYGSSSSTGTSSGHSDSSSHSTSSG--QADSVSQGTSWSEGTGTSQGQSV------GTSESWSTSQSETDSV 492
                          330       340       350       360       370       380
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1026 GGAVSTSTDFGGTLSTSVCFGGSPSTSAGFSGALNTNASFgcaistSAGFSGAVGTSAGF 1085
Cdd:NF033849   493 GDSTGTSESVSQGDGRSTGRSESQGTSLGTSGGRTSGAGG------SMGLGPSISLGKSY 546
ser_rich_anae_1 NF033849
serine-rich protein; This serine-rich protein belongs to a family with large size (over 1000 ...
713-1086 2.48e-16

serine-rich protein; This serine-rich protein belongs to a family with large size (over 1000 amino acids), which a highly serine-rich central region that averages over 300 aa in length. Species encoding members of this family of proteins tend to be anaerobic bacteria, including Gram-positive bacteria of the human gut microbiome and Chloroflexi from marine sediments.


Pssm-ID: 468206 [Multi-domain]  Cd Length: 1122  Bit Score: 85.06  E-value: 2.48e-16
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899  713 ENADASTSVNFSRGAGTRAGFSDGASISFngapSSSGGPGITFGGAPSSSASFSNTASISfggtlstsSSFSSAASISFG 792
Cdd:NF033849   245 ESVGHSTSQGQSHSVGTSESHSVGTSQSQ----SHTTGHGSTRGWSHTQSTSESESTGQS--------SSVGTSESQSHG 312
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899  793 GAPSTSTSFSSEASISFGGTPCTSASFsggvsssfsgplNTSATFSGAASSGFGGTLSTTAGFSSVLSTSTSFGSAPTTN 872
Cdd:NF033849   313 TTEGTSTTDSSSHSQSSSYNVSSGTGV------------SSSHSDGTSQSTSISHSESSSESTGTSVGHSTSSSVSSSES 380
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899  873 TVFSSALSTSTGFGGTLstsvcfggspsssgsfggtlstsicfGGSPCTSTGFGGTLSTSVSFGgpSStsancggtlsts 952
Cdd:NF033849   381 SSRSSSSGVSGGFSGGI--------------------------AGGGVTSEGLGASQGGSEGWG--SG------------ 420
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899  953 icfDGSPSTGAGFGGALNTSASFGSALNTSagfggaMSTSADFGSTLSTSVcfGGSPGTSVSFGSALNTSAGFGGAVSTS 1032
Cdd:NF033849   421 ---DSVQSVSQSYGSSSSTGTSSGHSDSSS------HSTSSGQADSVSQGT--SWSEGTGTSQGQSVGTSESWSTSQSET 489
                          330       340       350       360       370
                   ....*....|....*....|....*....|....*....|....*....|....
gi 1622971899 1033 TDFGGTLSTSVCFGGSPSTSAGFSGALNTNASFGCAISTSAGFSGAVGTSAGFS 1086
Cdd:NF033849   490 DSVGDSTGTSESVSQGDGRSTGRSESQGTSLGTSGGRTSGAGGSMGLGPSISLG 543
FhaB COG3210
Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, ...
704-1421 1.90e-15

Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 442443 [Multi-domain]  Cd Length: 1698  Bit Score: 82.51  E-value: 1.90e-15
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899  704 SFEIEARAQENADASTSVNFSRGAGTRAGFSDGASISFNGAPSSSGGPGITFGGAPSSSASFSNTASISFGGTLSTSSSF 783
Cdd:COG3210    795 SIDITADGTITAAGTTAINVTGSGGTITINTATTGLTGTGDTTSGAGGSNTTDTTTGTTSDGASGGGTAGANSGSLAATA 874
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899  784 SSAASISFGGAPSTSTSFSSEASISFGGTPCTSASFSGGVSSSFSGPLNTSATFSGAASSGFGGTLSTTAGFSSVLSTST 863
Cdd:COG3210    875 ASITVGSGGVATSTGTANAGTLTNLGTTTNAASGNGAVLATVTATGTGGGGLTGGNAAAGGTGAGNGTTALSGTQGNAGL 954
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899  864 SFGSAPTTNTVFSSALSTSTGFGGTLSTSVCFGGSPSSSGSFGGTLSTSICFGGSPCTSTGFGGTLSTSVSFGGPSSTSA 943
Cdd:COG3210    955 SAASASDGAGDTGASSAAGSSAVGTSANSAGSTGGVIAATGILVAGNSGTTASTTGGSGAIVAGGNGVTGTTGTASATGT 1034
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899  944 NCGGTLSTSICFDGSPSTGAGFGGALNTSASFGSALNTSAGFGGAMSTSADFGSTLSTSVCFGGSPGTSVSFGSALNTSA 1023
Cdd:COG3210   1035 GTAATAGGQNGVGVNASGISGGNAAALTASGTAGTTGGTAASNGGGGTAQASGAGTTHTLGGITNGGATGTSGGTTTSTG 1114
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1024 GFGGAVSTSTDFGGTLSTSVCFGGSPSTSAGFSGALNTNASFGCAISTSAGFSGAVGTSAGFSGVPSTNPGFGGAFNTSA 1103
Cdd:COG3210   1115 GVTASKVGGTTTVGATGTSTASTEAAGAGTLTGLVAVSAVAGGASSASAGDTTAVAAATTTTTGSAINGGADSAATEGTA 1194
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1104 GFGGALSTTTDFGGTPNNSIGFGAAPSTSVSFGGAHSTSLCFGGAPSTSLCFGSASNTNLCFGGPPSTSACFSGATSPSF 1183
Cdd:COG3210   1195 GTDLKGGDSTGGSTTTIGTTNVTTTTTLTASDTGNTTATGGSSAGQTGSFVAAGSASGTGDATTGATAGAVSNGATSTVA 1274
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1184 GDGPSTSTGFSFGNGLSTSAGFGGGLNTSAGFGGGLGTSAGFSGDLSTSSGFDGGLGTSAGFSGGPGTSTGFGGGLGTSA 1263
Cdd:COG3210   1275 GNAGATATGSTVDIGSTSATSAGGSLDTTGNTAGANGATVGTGIGGTTATGTAVAAVNSGGVNAGGGTINTTAANTGLNG 1354
                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1264 GFSGGLGTGAGFGGGLVTSDGFGGGLGTNASFGSTLGTGAGFSGGLSTSDGFGSRPNASFDRGLSTIIGFGSGSNTSTGF 1343
Cdd:COG3210   1355 GNGATDSAAGAGSGGAAGSLAATAGAGTVLTGAGNNTGAEGTNAGRDGGVTTSGTGVGNNGGVSGTTVAGTTGSSATTGT 1434
                          650       660       670       680       690       700       710
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1622971899 1344 IGEPSTSTGFHSGPSSIVGFSGGPSTGVGFCSGPSISGFSGGPSTGAGFGGGPNTGAGFGGGPSTSAGFGSGATSLGA 1421
Cdd:COG3210   1435 GGTGNTTGTSVAGAGGGNADASAINTGNASSLGAGGSTAGNAVGGAVIGGTTTGGNGAGVAGATASNGGTSTGAGGTA 1512
FhaB COG3210
Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, ...
714-1341 8.27e-12

Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 442443 [Multi-domain]  Cd Length: 1698  Bit Score: 70.57  E-value: 8.27e-12
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899  714 NADASTSVNFSRGAGTRAGFSDGASISFNGAPSSSGGPGITFGGAPSSSASFSNTASISFGGTLSTSSSFSSAASISFGG 793
Cdd:COG3210    119 TAASATTGNNTGGTTTSSTNTVTTLGGTTTGNTVLSTSGAGNNTNTNNSSSGTNIGNSIPTTGGSLNVVAANPTGVTGVG 198
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899  794 APSTSTSFSSEASISFGGTPCTSASFSGGVSSSFSGPLNTSATFSGAASSGFGGTLSTTAGFSSVLSTSTSFGSAPTTNT 873
Cdd:COG3210    199 GALINATAGVLANAGGGTAGGVASANSTLTGGVVAAGTGAGVISTGGTDISSLSVAAGAGTGGAGGTGNAGNTTIGTTVT 278
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899  874 VFSSALSTSTGFGGTLSTSVCFGGSPSSSGSFGGTLSTSICFGGSPCTSTGFGGTLSTSVSFGGPSSTSANCGGTLSTSI 953
Cdd:COG3210    279 GTNATGSNTAGASSGDTTTNGTSSVTGAGGTGVLGGGTAAGITTTNTVGGNGDGNNTTANSGAGLVSGGTGGNNGTTGTG 358
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899  954 CFDGSPSTGAGFGGALNTSASFGSALNTSAGFGGAMSTSADFGSTLSTSVCFGGSPGTSVSFGSALNTSAGFGGAVSTST 1033
Cdd:COG3210    359 AGSGLTGTGNGGGLTTAGAGTVASTVGTATASTGNASSTTVLGSGSLATGNTGTTIAGNGGSANAGGFTTTGGVLGITGN 438
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1034 DFGGTLSTSVCFGGSPSTSAGFSGALNTNASfgcaisTSAGFSGAVGTSAGFSGVPSTNPGFGGAFNTSAGFGGALSTTT 1113
Cdd:COG3210    439 GTVTGGTIGGLTGSGTTNGAGLSGNTDVSGT------GTVTNSAGNTTSATTLAGGGIGTVTTNATISNNAGGDANGIAT 512
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1114 DFGGTPNNSIGFGAAPSTSVSFGGAHSTSLCFGGAPSTSLCFGSASNTNLCFGGPPSTSACFSGATSPSFGDGPSTSTGF 1193
Cdd:COG3210    513 GLTGITAGGGGGGNATSGGTGGDGTTLSGSGLTTTVSGGASGTTAASGSNTANTLGVLAATGGTSNATTAGNSTSATGGT 592
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1194 SFGNGLSTSAGFGGGLNTSAGFGGGLGTSAGFSGDLSTSSGFDGGLGTSAGFSGGPGTSTGFGGGLGTSAGFSGGLGTGA 1273
Cdd:COG3210    593 GTNSGGTVLSIGTGSAGATGTITLGAGTSGAGANATGGGAGLTGSAVGAALSGTGSGTTGTASANGSNTTGVNTAGGTGG 672
                          570       580       590       600       610       620
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1622971899 1274 GFGGGLVTSDGFGGGLGTNASFGSTLGTGAGFSGGLSTSDGFGSRPNASFDRGLSTIIGFGSGSNTST 1341
Cdd:COG3210    673 GTTGTVTSGATGGTTGTTLNAATGGTLNNAGNTLTISTGSITVTGQIGALANANGDTVTFGNLGTGAT 740
AidA COG3468
Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular ...
867-1307 5.04e-11

Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 442691 [Multi-domain]  Cd Length: 846  Bit Score: 67.66  E-value: 5.04e-11
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899  867 SAPTTNTVFSSALSTSTGFGGTLSTSVCFGGSPSSSGSFGGTLSTSICFGGSPCTSTGFGGTLSTSVSFGGPSSTSANCG 946
Cdd:COG3468      1 TASGGGGGATGLGGGGTGGGGGLGGTGGGNAGLGIGNGGGGGAASGSGAGGVAGNGGGGGGGAGGGGGGAGSGGGLAGAG 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899  947 GTLSTSICFDGSPSTGAGFGGALNTSASFGSALNTSAGFGGAMSTSADFGSTLSTSVCFGGspGTSVSFGSALNTSAGFG 1026
Cdd:COG3468     81 SGGTGGNSTGGGGGNSGTGGTGGGGGGGGSGNGGGGGGGGGGGGTGGGGGGGTGSAGGGGG--GGGGGTGVGGTGAAAAG 158
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1027 GAVSTSTDFGGTLSTSVCFGGSPSTSAGFSGALNTNASFGcaISTSAGFSGAVGTSAGFSGVPSTNPGFGGAFNTSAGFG 1106
Cdd:COG3468    159 GGTGSGGGGSGGGGGAGGGGGGGAGGSGGAGSTGSGAGGG--GGGSGGGGGAAGTGGGGGGGGGAGGATGGAGSGGNTGG 236
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1107 GALSTTTDFGGTPNNSIGFGAAPSTSVSFGGAHSTSLCFGGApstslcFGSASNTNLCFGGPPSTSACFSGATSPSFGDG 1186
Cdd:COG3468    237 GVGGGGGSAGGTGGGGLTGGGAAGTGGGGGGTGTGSGGGGGG------GANGGGSGGGGGASGTGGGGTASTGGGGGGGG 310
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1187 PSTSTGFSFGNGLSTSAGFGGGLNTSAGFGGGLGTSAGFSGDLSTSSGFDGGLGTSAGFSGGPGTSTGFGGGLGTSAGFS 1266
Cdd:COG3468    311 GNGGGGGGGSNAGGGSGGGGGGGGGGGGGGTTLNGAGSAGGGTGAALAGTGGSGSGGGGGGGSGGGGGAGGGGANTGSDG 390
                          410       420       430       440
                   ....*....|....*....|....*....|....*....|.
gi 1622971899 1267 GGLGTGAGFGGGLVTSDGFGGGLGTNASFGSTLGTGAGFSG 1307
Cdd:COG3468    391 VGTGLTTGGTGNNGGGGVGGGGGGGLTLTGGTLTVNGNYTG 431
COG4625 COG4625
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function ...
916-1398 7.18e-11

Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function unknown];


Pssm-ID: 443664 [Multi-domain]  Cd Length: 900  Bit Score: 67.11  E-value: 7.18e-11
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899  916 GGSPCTSTGFGGTLSTSVSFGGPSSTSANCGGTLSTSICFDGSPSTGAGFGGALNTSASFGSALNTSAGFGGAMSTSADF 995
Cdd:COG4625     19 GGGAGGGGGAGGGAGGGGAGGGGGGGGGGGGAGGGGGGGGTGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGTGGVGGGGG 98
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899  996 GSTLSTSVCFGGSPGTSVSFGSALNTSAGFGGAVSTSTDFGGTLSTSVCFGGSPSTSAGFSGALNTNASFGCAISTSAGF 1075
Cdd:COG4625     99 GGGGGGGGGGGGGGGGGGGSAGGGGGGAGGAGGGGGGGAGGGGGGGGGGGAGGGGGGGAGGAGGGGGGGGGGGGGGGGGG 178
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1076 SGAVGTSAGFSGVPSTNPGFGGAFNTSAGFGGALSTTTDFGGTPNNSIGFGAAPSTSVSFGGAHSTslcfGGAPSTSLCF 1155
Cdd:COG4625    179 GGGGGGGGGGGGGGNGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG----GGGAGGGGGG 254
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1156 GSASNTNLCFGGPPSTSACFSGATSPSFGDGPSTSTGFSFGNGLSTSAGFGGGLNTSAGFGGGLGTSAGFSGDLSTSSGF 1235
Cdd:COG4625    255 GGGNGGGGGAGGGGGGGGGGSGGGGGGGGGGGSGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGA 334
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1236 DGGLGTSAGFSGGPGTSTGFGGGLGTSAGFSGGLGTGAGFGGGLVTSDGFGGGLGTNASFGSTLGTGAGFSGGLSTSDGF 1315
Cdd:COG4625    335 GGGGGSGGAGAGGGGAGGGGAGGGGGGGTGGGGGGGGGGGGGSGGGGAGGGGGSGGGGGGGAGGGGGGGGAGGTGGGGAG 414
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1316 GSRPNASFDRGLSTIIGFGSGSNTSTGFIGEPSTSTGFHSGPSSIVGFSGGPSTGVGFCSGPSISGFSGGPSTGAGFGGG 1395
Cdd:COG4625    415 GGGGAAGGGGGGTGAGGGGGGGGTGAGGGGATGGGGGGGGGAGGSGGGAGAGGGSGSGAGTLTLTGNNTYTGTTTVNGGG 494

                   ...
gi 1622971899 1396 PNT 1398
Cdd:COG4625    495 NYT 497
COG4625 COG4625
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function ...
832-1308 1.12e-10

Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function unknown];


Pssm-ID: 443664 [Multi-domain]  Cd Length: 900  Bit Score: 66.34  E-value: 1.12e-10
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899  832 NTSATFSGAASSGFGGTLSTTAGFSSVLSTSTSFGSAPTTNTVFSSALSTSTGFGGTLSTSVCFGGSPSSSGSFGGTLST 911
Cdd:COG4625     18 GGGGAGGGGGAGGGAGGGGAGGGGGGGGGGGGAGGGGGGGGTGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGTGGVGGGG 97
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899  912 SICFGGSPCTSTGFGGTLSTSVSFGGPSSTSANCGGTLSTSICFDGSPSTGAGFGGALNTSASFGSALNTSAGFGGAMST 991
Cdd:COG4625     98 GGGGGGGGGGGGGGGGGGGGSAGGGGGGAGGAGGGGGGGAGGGGGGGGGGGAGGGGGGGAGGAGGGGGGGGGGGGGGGGG 177
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899  992 SADFGSTLSTSVCFGGSPGTSVSFGSALNTSAGFGGAVSTSTDFGGTLSTSVCFGGSPSTSAGFSGALNTNASFGCAIST 1071
Cdd:COG4625    178 GGGGGGGGGGGGGGGNGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAGGGGGGGGG 257
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1072 SAGFSGAVGTSAGFSGVPSTNPGFGGAFNTSAGFGGALSTTTDFGGTPNNSIGFGAAPSTSVSFGGAHSTSLCFGGAPST 1151
Cdd:COG4625    258 NGGGGGAGGGGGGGGGGSGGGGGGGGGGGSGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAGGG 337
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1152 SLCFGSASNTNLCFGGPPSTSACFSGATSPSFGDGPSTSTGFSFGNGLSTSAGFGGGLNTSAGFGGGLGTSAGFSGDLST 1231
Cdd:COG4625    338 GGSGGAGAGGGGAGGGGAGGGGGGGTGGGGGGGGGGGGGSGGGGAGGGGGSGGGGGGGAGGGGGGGGAGGTGGGGAGGGG 417
                          410       420       430       440       450       460       470
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1622971899 1232 SSGFDGGLGTSAGFSGGPGTSTGFGGGLGTSAGFSGGLGTGAGFGGGLVTSDGFGGGLGTNASFGSTLGTGAGFSGG 1308
Cdd:COG4625    418 GAAGGGGGGTGAGGGGGGGGTGAGGGGATGGGGGGGGGAGGSGGGAGAGGGSGSGAGTLTLTGNNTYTGTTTVNGGG 494
COG4625 COG4625
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function ...
763-1264 3.28e-10

Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function unknown];


Pssm-ID: 443664 [Multi-domain]  Cd Length: 900  Bit Score: 64.80  E-value: 3.28e-10
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899  763 ASFSNTASISFGGTLSTSSSFSSAASISFGGAPSTSTSFSSEASISFGGTPCTSASFSGGVSSSFSGPLNTSATFSGAAS 842
Cdd:COG4625      1 GGGGGGGGGGGGGGGGTGGGGAGGGGGAGGGAGGGGAGGGGGGGGGGGGAGGGGGGGGTGGGGGGGGGGGGGGAGGGGGG 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899  843 SGFGGTLSTTAGFSSVLSTSTSFGSAPTTNTVFSSALSTSTGFGGTLSTSVCFGGSPSSSGSFGGTLSTSICFGGSPCTS 922
Cdd:COG4625     81 GGGGGGGGGTGGVGGGGGGGGGGGGGGGGGGGGGGGGSAGGGGGGAGGAGGGGGGGAGGGGGGGGGGGAGGGGGGGAGGA 160
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899  923 TGFGGTLSTSVSFGGPSSTSANCGGTLSTSICFDGSPSTGAGFGGALNTSASFGSALNTSAGFGGAMSTSADFGSTLSTS 1002
Cdd:COG4625    161 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGNGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGGGGGGGGGGGG 240
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1003 VCFGGSPGTSVSFGSALNTSAGFGGAVSTSTDFGGTLSTSVCFGGSPSTSAGFSGALNTNASFGCAISTSAGFSGAVGTS 1082
Cdd:COG4625    241 GGGGGGGAGGGGGGGGGNGGGGGAGGGGGGGGGGSGGGGGGGGGGGSGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 320
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1083 AGFSGVPSTNPGFGGAFNTSAGFGGALSTTTDFGGTPNNSIGFGAAPSTSVSFGGAHSTSLCFGGAPSTSLCFGSASNTN 1162
Cdd:COG4625    321 GGGGGGGGGGGGGAGGGGGSGGAGAGGGGAGGGGAGGGGGGGTGGGGGGGGGGGGGSGGGGAGGGGGSGGGGGGGAGGGG 400
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1163 LCFGGPpSTSACFSGATSPSFGDGPSTSTGFSFGNGLSTSAGFGGGLNTSAGFGGGLGTSAGFSGDLSTSSGFDGGLGTS 1242
Cdd:COG4625    401 GGGGAG-GTGGGGAGGGGGAAGGGGGGTGAGGGGGGGGTGAGGGGATGGGGGGGGGAGGSGGGAGAGGGSGSGAGTLTLT 479
                          490       500
                   ....*....|....*....|..
gi 1622971899 1243 AGFSGGPGTSTGFGGGLGTSAG 1264
Cdd:COG4625    480 GNNTYTGTTTVNGGGNYTQSAG 501
COG4625 COG4625
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function ...
792-1266 2.65e-09

Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function unknown];


Pssm-ID: 443664 [Multi-domain]  Cd Length: 900  Bit Score: 62.10  E-value: 2.65e-09
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899  792 GGAPSTSTSFSSEASISFGGTPCTSASFSGGVSSSFSGPLNTSATFSGAASSGFGGTLSTTAGFSSVLSTSTSFGSAPTT 871
Cdd:COG4625     10 GGGGGGGTGGGGAGGGGGAGGGAGGGGAGGGGGGGGGGGGAGGGGGGGGTGGGGGGGGGGGGGGAGGGGGGGGGGGGGGG 89
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899  872 NTVFSSALSTSTGFGGTLSTSVCFGGSPSSSGSFGGTLSTSICFGGSPCTSTGFGGTLSTSVSFGGPSSTSANCGGTLST 951
Cdd:COG4625     90 TGGVGGGGGGGGGGGGGGGGGGGGGGGGSAGGGGGGAGGAGGGGGGGAGGGGGGGGGGGAGGGGGGGAGGAGGGGGGGGG 169
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899  952 SICFDGSPSTGAGFGGALNTSASFGSALNTSAGFGGAMSTSADFGSTLSTSVcfGGSPGTSVSFGSALNTSAGFGGAVST 1031
Cdd:COG4625    170 GGGGGGGGGGGGGGGGGGGGGGGNGGGGGGGGGGGGGGGGGGGGAGGGGGGG--GGGGGGGGGGGGGGGGGGGGGGGGGG 247
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1032 STDFGGTLSTSVCFGGSPSTSAGFSGALNTNASFGCAISTSAGFSGAVGTSAGFSGVPSTNPGFGGAFNTSAGFGGALST 1111
Cdd:COG4625    248 AGGGGGGGGGNGGGGGAGGGGGGGGGGSGGGGGGGGGGGSGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 327
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1112 TTDFGGTPNNSIGFGAAPSTSVSFGGAHSTSLCFGGAPSTSLCFGSASNTNLCFGGPPSTSACFSGATSPSFGDGPSTST 1191
Cdd:COG4625    328 GGGGGGAGGGGGSGGAGAGGGGAGGGGAGGGGGGGTGGGGGGGGGGGGGSGGGGAGGGGGSGGGGGGGAGGGGGGGGAGG 407
                          410       420       430       440       450       460       470
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1622971899 1192 GFSFGNGLSTSAGFGGGLNTSAGFGGGLGTSAGFSGDLSTSSGFDGGLGTSAGFSGGPGTSTGFGGGLGTSAGFS 1266
Cdd:COG4625    408 TGGGGAGGGGGAAGGGGGGTGAGGGGGGGGTGAGGGGATGGGGGGGGGAGGSGGGAGAGGGSGSGAGTLTLTGNN 482
PTZ00395 PTZ00395
Sec24-related protein; Provisional
1005-1227 6.61e-08

Sec24-related protein; Provisional


Pssm-ID: 185594 [Multi-domain]  Cd Length: 1560  Bit Score: 57.78  E-value: 6.61e-08
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1005 FGGSPGTSVSFGSALNTSAGFGGAVStstdfGGTLSTSvcfggSPSTSAGFSGALNTNASFGCAISTSAGFSGAVGTSAG 1084
Cdd:PTZ00395   339 YGGFHDGSPNAASAGAPFNGLGNQAD-----GGHINQV-----HPDARGAWAGGPHSNASYNCAAYSNAAQSNAAQSNAG 408
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1085 FSGVPSTNPGfggafNTSAGFGGALSTTTDFGGTPNNSIGFGAAPSTSVSFGGAHSTSLCFGGAPSTSLCFGSASNTNLC 1164
Cdd:PTZ00395   409 FSNAGYSNPG-----NSNPGYNNAPNSNTPYNNPPNSNTPYSNPPNSNPPYSNLPYSNTPYSNAPLSNAPPSSAKDHHSA 483
                          170       180       190       200       210       220
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1622971899 1165 FggppSTSACFSGATSPSfGDGP----STSTGFSFGNGLSTSAGFGGGLNTSAGFGGGLGTSAGFSG 1227
Cdd:PTZ00395   484 Y----HAAYQHRAANQPA-ANLPtanqPAANNFHGAAGNSVGNPFASRPFGSAPYGGNAATTADPNG 545
Hia COG5295
Autotransporter adhesin [Intracellular trafficking, secretion, and vesicular transport, ...
846-1427 2.08e-07

Autotransporter adhesin [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures];


Pssm-ID: 444098 [Multi-domain]  Cd Length: 785  Bit Score: 55.55  E-value: 2.08e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899  846 GGTLSTTAGFSSVLSTSTSFGSAPTTNTVFSSALSTSTGFGGTLSTSVCFGGSPSSSGSFGGTLSTSICFGGSPCTSTGF 925
Cdd:COG5295      2 ASNAGAVAAGTALTTVASGASTTASGSSATVTSAAQSTGSAATSSGSSSAAGGSGSTSSLTAAAATAGAGSGGTSATAAS 81
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899  926 GGTLSTSVSFGGPSSTSANCGGTLSTSICFDGSPSTGAGFGGALNTSASFGSALNTSAGFGGAMSTSADFGSTLSTSVCF 1005
Cdd:COG5295     82 SVASGGASAATAASTGTGNTAGTAATVAGAASSGSATNAGASAGASAAAAAGSTAAAGGAAASTGGSSAAGGSNTATATG 161
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1006 GGSPGTSVSFGSALNTSAGFGGAVSTSTDFGGTLSTSVCFGGSPSTSAGFSGALNTNASFGCAISTSAGFSGAVGTSAGF 1085
Cdd:COG5295    162 SSTANAATAAAGATSTSASGSSSGASGAAAASAATGASAGGTASAAASASSSATGTSASVGVNAGAATGSAASAGGSASA 241
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1086 SGVPSTNPGFGGAFNTSAGFGGALSTTTDFGGTPNNSIGFG---AAPSTSVSFGGAHSTSLCFGGAPSTSLCFGSASNTN 1162
Cdd:COG5295    242 GAASGNATTASASSVSGSAVAAGTASTATTASTTAASGAAGtatAAAGGDAAAAGSASSTGAANATAGGGNAGSGGGGAA 321
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1163 LCFGGPPSTSACFSGATSPSFGDGPSTSTGFSFGNGLSTSAGFGGGLNTSAGFGGGLGTSAGFSGDLSTSSGFDGGLGTS 1242
Cdd:COG5295    322 ALGSAGGSSGVGTASGASAAAATNDGTANGAGTSAAADATSGGGAGGGGAAATSSSGGSATAAGNAAGAAGAGSAGSGGS 401
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1243 AGFSGGPGTSTGFGGGLGTSAGFSGGLGTGAGFGGGLVTSDGFGGGLGTNASFGSTLGTGAGFSGGLSTSDGFGSRPNAS 1322
Cdd:COG5295    402 STGASAGGGASAAGGAAAGSAAAGTSSNTSAVGASNGASGTSSSASSAGAAGGGTAGAGGAANVGAATTAASAAATAAAA 481
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1323 FDRGLSTIIGFGSGSNTSTGFIGEPSTSTGFHSGPSSIVGFSGGPSTGVGFCSGPSISGFSGGPSTGAGFGGGPNTGAGF 1402
Cdd:COG5295    482 TSSAAIAGATATGAGAAAGGAGAGAAGGAGSAAAGGAANAAAASGATATAGSAGGGAAAAAGGGSTTAATGTNSVAVGNN 561
                          570       580
                   ....*....|....*....|....*
gi 1622971899 1403 GGGPSTSAGFGSGATSLGACGFSYG 1427
Cdd:COG5295    562 TATGANSVALGAGSVASGANSVSVG 586
COG4625 COG4625
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function ...
714-1252 8.89e-07

Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function unknown];


Pssm-ID: 443664 [Multi-domain]  Cd Length: 900  Bit Score: 53.63  E-value: 8.89e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899  714 NADASTSVNFSRGAGTRAGFSDGASISFNGAPSSSGGPGITFGGAPSSSASFSNTASISFGGTLSTSSSFSSAASISFGG 793
Cdd:COG4625      6 GGGGGGGGGGGTGGGGAGGGGGAGGGAGGGGAGGGGGGGGGGGGAGGGGGGGGTGGGGGGGGGGGGGGAGGGGGGGGGGG 85
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899  794 APSTSTSFSSEASISFGGTPCTSASFSGGVSSSFSGPLNTSATFSGAASSGFGGTLSTTAGFSSVLSTSTSFGSAPTTNT 873
Cdd:COG4625     86 GGGGTGGVGGGGGGGGGGGGGGGGGGGGGGGGSAGGGGGGAGGAGGGGGGGAGGGGGGGGGGGAGGGGGGGAGGAGGGGG 165
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899  874 VFSSALSTSTGFGGTLSTSVCFGGSPSSSGSFGGTLSTSICFGGSPCTSTGFGGTLSTSVSFGGPSSTSANCGGTLSTSI 953
Cdd:COG4625    166 GGGGGGGGGGGGGGGGGGGGGGGGGGGNGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 245
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899  954 CFDGSPSTGAGFGGALNTSASFGSALNTSAGFGGAMSTSADFGSTLSTSVCFGGSPGTSVSFGSALNTSAGFGGAVSTST 1033
Cdd:COG4625    246 GGAGGGGGGGGGNGGGGGAGGGGGGGGGGSGGGGGGGGGGGSGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 325
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1034 DFGGTLSTSVCFGGSPSTSAGFSGALNTNASfgcAISTSAGFSGAVGTSAGFSGVPSTNPGFGGAFNTSAGFGGALSTTT 1113
Cdd:COG4625    326 GGGGGGGGAGGGGGSGGAGAGGGGAGGGGAG---GGGGGGTGGGGGGGGGGGGGSGGGGAGGGGGSGGGGGGGAGGGGGG 402
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1114 DFGGTPNNSIGFGAAPSTSVSFGGAHSTSLCFGGAPSTSLCFGSASNTNLCFGGPPSTSACFSGATSPSFGDGPSTSTGF 1193
Cdd:COG4625    403 GGAGGTGGGGAGGGGGAAGGGGGGTGAGGGGGGGGTGAGGGGATGGGGGGGGGAGGSGGGAGAGGGSGSGAGTLTLTGNN 482
                          490       500       510       520       530
                   ....*....|....*....|....*....|....*....|....*....|....*....
gi 1622971899 1194 SFGNGLSTSAGFGGGLNTSAGFGGGLGTSAGFSGDLSTSSGFDGGLGTSAGFSGGPGTS 1252
Cdd:COG4625    483 TYTGTTTVNGGGNYTQSAGSTLAVEVDAANSDRLVVTGTATLNGGTVVVLAGGYAPGTT 541
Chi1 COG3469
Chitinase [Carbohydrate transport and metabolism];
978-1192 1.70e-06

Chitinase [Carbohydrate transport and metabolism];


Pssm-ID: 442692 [Multi-domain]  Cd Length: 534  Bit Score: 52.45  E-value: 1.70e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899  978 ALNTSAGFGGAMSTSADFGSTLSTSVCFGGSPGTSVSFGSALNTSAGFGGAVSTSTDFGGTLSTSVCFGGSPSTSAGFSG 1057
Cdd:COG3469      1 SSSVSTAASPTAGGASATAVTLLGAAATAASVTLTAATATTVVSTTGSVVVAASGSAGSGTGTTAASSTAATSSTTSTTA 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1058 ALNTNASFGCAISTSAGFSGAVGTSAGFSGVPSTnpgfggafnTSAGFGGALSTTTDFGGTPNNSIGFGAAPSTSVSFGG 1137
Cdd:COG3469     81 TATAAAAAATSTSATLVATSTASGANTGTSTVTT---------TSTGAGSVTSTTSSTAGSTTTSGASATSSAGSTTTTT 151
                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 1622971899 1138 AHSTSLCF-GGAPSTSLCFGSASNTNLCFGGPPSTSACFSGATSPSFGDGPSTSTG 1192
Cdd:COG3469    152 TVSGTETAtGGTTTTSTTTTTTSASTTPSATTTATATTASGATTPSATTTATTTGP 207
Nucleoporin_FG2 pfam15967
Nucleoporin FG repeated region; Nucleoporin_FG2, or nucleoporin p58/p45, is a family of ...
1066-1263 1.71e-06

Nucleoporin FG repeated region; Nucleoporin_FG2, or nucleoporin p58/p45, is a family of chordate nucleoporins. The proteins carry many repeats of the FG sequence motif.


Pssm-ID: 435043 [Multi-domain]  Cd Length: 586  Bit Score: 52.36  E-value: 1.71e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1066 GCAISTSAGFSGAVGTSAGFSGVPSTNPGFGGAFntsaGFGGALSTTTDFGGTPNNSIGFGAAPstsvsFGGAHSTSLCF 1145
Cdd:pfam15967    3 GFSFGGGPGSTATAGGGFSFGAAAASNPGSTGGF----SFGTLGAAPAATATTTTATLGLGGGL-----FGQKPATGFTF 73
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1146 GGAPSTSlcfGSASNTNLCFGGPPSTSACFSG-----------ATSPSFGDGPSTSTGFSFGNGLSTSAGFGGGLNTSAG 1214
Cdd:pfam15967   74 GTPASST---AATGPTGLTLGTPAATTAASTGfslgfnkpaasATPFSLPASSTSGGGLSLGSVLTSTAAQQGATGFTLN 150
                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|..
gi 1622971899 1215 FGGGLGTSAGFSGDL---STSSGFDGGLGTSAGFSGGPGTSTGFGGGLGTSA 1263
Cdd:pfam15967  151 LGGTPATTTAVSTGLslgSTLTSLGGSLFQNTNSTGLGQTTLGLTLLATSTA 202
Chi1 COG3469
Chitinase [Carbohydrate transport and metabolism];
928-1122 5.63e-06

Chitinase [Carbohydrate transport and metabolism];


Pssm-ID: 442692 [Multi-domain]  Cd Length: 534  Bit Score: 50.91  E-value: 5.63e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899  928 TLSTSVSFGGPSSTSANCGGTLSTSICFDGSPSTGAGFGGALNTSASFGSALNTSAGFGGAMSTSADFGSTLSTSVCFGG 1007
Cdd:COG3469      1 SSSVSTAASPTAGGASATAVTLLGAAATAASVTLTAATATTVVSTTGSVVVAASGSAGSGTGTTAASSTAATSSTTSTTA 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1008 SPGTSVSFGSALNTSAGFGGAVSTSTDFGGTLSTSVCFGGSPSTSAGFSGALNTNASFGCAISTSAGFSGAVGTSAGFSG 1087
Cdd:COG3469     81 TATAAAAAATSTSATLVATSTASGANTGTSTVTTTSTGAGSVTSTTSSTAGSTTTSGASATSSAGSTTTTTTVSGTETAT 160
                          170       180       190
                   ....*....|....*....|....*....|....*...
gi 1622971899 1088 VPSTNP---GFGGAFNTSAGFGGALSTTTDFGGTPNNS 1122
Cdd:COG3469    161 GGTTTTsttTTTTSASTTPSATTTATATTASGATTPSA 198
Nucleoporin_FG2 pfam15967
Nucleoporin FG repeated region; Nucleoporin_FG2, or nucleoporin p58/p45, is a family of ...
1092-1326 8.12e-06

Nucleoporin FG repeated region; Nucleoporin_FG2, or nucleoporin p58/p45, is a family of chordate nucleoporins. The proteins carry many repeats of the FG sequence motif.


Pssm-ID: 435043 [Multi-domain]  Cd Length: 586  Bit Score: 50.44  E-value: 8.12e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1092 NPGFGGAFNTSAGFGGALSTTTDFGGTPNNSIGFGAAPSTSVSFGGAHSTSLCFGGAPstslcFGSASNTNLCFGGPPST 1171
Cdd:pfam15967    5 SFGGGPGSTATAGGGFSFGAAAASNPGSTGGFSFGTLGAAPAATATTTTATLGLGGGL-----FGQKPATGFTFGTPASS 79
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1172 SAcfSGATSPSFGDGPSTSTgfsfgnglSTSAGFGGGLNTSAgfggglGTSAGFSGDLSTSSGFDGGLGTSAGFSGGPGT 1251
Cdd:pfam15967   80 TA--ATGPTGLTLGTPAATT--------AASTGFSLGFNKPA------ASATPFSLPASSTSGGGLSLGSVLTSTAAQQG 143
                          170       180       190       200       210       220       230
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1622971899 1252 STGFGGGLGTSAGFSGGLGTGAGFGGGLvtsDGFGGGLGTNASfGSTLGTGAGFSGGLSTSDGFGSRPNASFDRG 1326
Cdd:pfam15967  144 ATGFTLNLGGTPATTTAVSTGLSLGSTL---TSLGGSLFQNTN-STGLGQTTLGLTLLATSTAPVSAPAASEGLG 214
PPE COG5651
PPE-repeat protein [Function unknown];
1053-1266 1.96e-05

PPE-repeat protein [Function unknown];


Pssm-ID: 444372 [Multi-domain]  Cd Length: 385  Bit Score: 48.74  E-value: 1.96e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1053 AGFSGALNTNASFGCAISTSAGFSGAVGTSAGFSGVPSTNPGFGGAFNTS---AGFGGALSTTTDFGGTPNNSIGFGAAP 1129
Cdd:COG5651    155 AAASAAAVALTPFTQPPPTITNPGGLLGAQNAGSGNTSSNPGFANLGLTGlnqVGIGGLNSGSGPIGLNSGPGNTGFAGT 234
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1130 STSVSFGGAHSTSLCFGGAPSTSLCFGSASNTNLCFGGPPSTSACFSGATSPSFGDGPSTSTGFSFGNGLSTSAGFGGGL 1209
Cdd:COG5651    235 GAAAGAAAAAAAAAAAAGAGASAALASLAATLLNASSLGLAATAASSAATNLGLAGSPLGLAGGGAGAAAATGLGLGAGG 314
                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|....*..
gi 1622971899 1210 NTSAGFGGGLGTSAGFSGDLSTSSGFDGGLGTSAGFSGGPGTSTGFGGGLGTSAGFS 1266
Cdd:COG5651    315 AAGAAGATGAGAALGAGAAAAAAGAAAGAGAAAAAAAGGAGGGGGGALGAGGGGGSA 371
Chi1 COG3469
Chitinase [Carbohydrate transport and metabolism];
908-1121 1.12e-04

Chitinase [Carbohydrate transport and metabolism];


Pssm-ID: 442692 [Multi-domain]  Cd Length: 534  Bit Score: 46.67  E-value: 1.12e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899  908 TLSTSICFGGSPCTSTGFGGTLSTSVSFGGPSSTSANCGGTLSTSICFDGSPSTGAGFGGALNTSASFGSALNTSAGFGG 987
Cdd:COG3469      1 SSSVSTAASPTAGGASATAVTLLGAAATAASVTLTAATATTVVSTTGSVVVAASGSAGSGTGTTAASSTAATSSTTSTTA 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899  988 AMSTSADFGSTLSTSVCFGGSPGTSVSFGSALNTSAGFGGAVSTSTDFGGTLSTSVcfgGSPSTSAGFSGALNTNASFGC 1067
Cdd:COG3469     81 TATAAAAAATSTSATLVATSTASGANTGTSTVTTTSTGAGSVTSTTSSTAGSTTTS---GASATSSAGSTTTTTTVSGTE 157
                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|....
gi 1622971899 1068 AISTSAGFSGAVGTSAGFSGVPSTNPGFGGAFNTSAGFGGALSTTTDFGGTPNN 1121
Cdd:COG3469    158 TATGGTTTTSTTTTTTSASTTPSATTTATATTASGATTPSATTTATTTGPPTPG 211
Nucleoporin_FG2 pfam15967
Nucleoporin FG repeated region; Nucleoporin_FG2, or nucleoporin p58/p45, is a family of ...
723-927 1.19e-04

Nucleoporin FG repeated region; Nucleoporin_FG2, or nucleoporin p58/p45, is a family of chordate nucleoporins. The proteins carry many repeats of the FG sequence motif.


Pssm-ID: 435043 [Multi-domain]  Cd Length: 586  Bit Score: 46.58  E-value: 1.19e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899  723 FSRGAGTRAGFSDGASISFNGAPSS----SGGPGI-TFGGAPSSSASfSNTASISFGGTLSTSSSFSSAASisfgGAPST 797
Cdd:pfam15967    4 FSFGGGPGSTATAGGGFSFGAAAASnpgsTGGFSFgTLGAAPAATAT-TTTATLGLGGGLFGQKPATGFTF----GTPAS 78
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899  798 STSFSSEASISfGGTPCTSASFSGGVSSSFSGPLNTSATFSGAASSGFGGTLSttagFSSVLSTSTS----------FGS 867
Cdd:pfam15967   79 STAATGPTGLT-LGTPAATTAASTGFSLGFNKPAASATPFSLPASSTSGGGLS----LGSVLTSTAAqqgatgftlnLGG 153
                          170       180       190       200       210       220
                   ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1622971899  868 APTTNTVFSSAL---STSTGFGGTLSTSVcFGGSPSSSGSFGGTLSTSICFGGSPCTSTGFGG 927
Cdd:pfam15967  154 TPATTTAVSTGLslgSTLTSLGGSLFQNT-NSTGLGQTTLGLTLLATSTAPVSAPAASEGLGG 215
Nucleoporin_FG2 pfam15967
Nucleoporin FG repeated region; Nucleoporin_FG2, or nucleoporin p58/p45, is a family of ...
731-994 2.27e-04

Nucleoporin FG repeated region; Nucleoporin_FG2, or nucleoporin p58/p45, is a family of chordate nucleoporins. The proteins carry many repeats of the FG sequence motif.


Pssm-ID: 435043 [Multi-domain]  Cd Length: 586  Bit Score: 45.81  E-value: 2.27e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899  731 AGFSDGASisfnGAPSSSGGPGITFGGAPSSSAsfSNTASISFGgtlstsssfssaasiSFGGAPSTSTSfSSEASISFG 810
Cdd:pfam15967    2 SGFSFGGG----PGSTATAGGGFSFGAAAASNP--GSTGGFSFG---------------TLGAAPAATAT-TTTATLGLG 59
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899  811 GTPctsasfsGGVSSSFSGPLNTSAtfSGAASSGFGGTLSTTAGFSSVLSTSTSFGSAPTTNTVFSSALSTSTGFGGTLS 890
Cdd:pfam15967   60 GGL-------FGQKPATGFTFGTPA--SSTAATGPTGLTLGTPAATTAASTGFSLGFNKPAASATPFSLPASSTSGGGLS 130
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899  891 TSVCFGGSPSSSGSFGGTLStsicFGGSPCTSTgfggTLSTSVSFGgpsSTSANCGGTLSTSICFDGSPSTGAGfGGALN 970
Cdd:pfam15967  131 LGSVLTSTAAQQGATGFTLN----LGGTPATTT----AVSTGLSLG---STLTSLGGSLFQNTNSTGLGQTTLG-LTLLA 198
                          250       260
                   ....*....|....*....|....*
gi 1622971899  971 TSASFGSALNTSAGFGGA-MSTSAD 994
Cdd:pfam15967  199 TSTAPVSAPAASEGLGGLdFSTSSE 223
PPE COG5651
PPE-repeat protein [Function unknown];
1196-1414 5.29e-04

PPE-repeat protein [Function unknown];


Pssm-ID: 444372 [Multi-domain]  Cd Length: 385  Bit Score: 44.11  E-value: 5.29e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1196 GNGLSTSAGFGGGLNTSAGFGgglgtSAGFSGDLSTSSGFDGGLGTSAGFSGGPGTSTGFGGGLGTSAGFSGGLGTGAGF 1275
Cdd:COG5651    178 GGLLGAQNAGSGNTSSNPGFA-----NLGLTGLNQVGIGGLNSGSGPIGLNSGPGNTGFAGTGAAAGAAAAAAAAAAAAG 252
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1276 GGGLVTSDGFGGGLGTNASFGSTLGTGAGFSGGLSTSDGFGSRPNASFDRGLSTIIGFGSGSNTSTGFIGEPSTSTGFHS 1355
Cdd:COG5651    253 AGASAALASLAATLLNASSLGLAATAASSAATNLGLAGSPLGLAGGGAGAAAATGLGLGAGGAAGAAGATGAGAALGAGA 332
                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|....*....
gi 1622971899 1356 GPSSIVGFSGGPSTGVGFCSGPSISGFSGGPSTGAGfgggpnTGAGFGGGPSTSAGFGS 1414
Cdd:COG5651    333 AAAAAGAAAGAGAAAAAAAGGAGGGGGGALGAGGGG------GSAGAAAGAASGGGAAA 385
Nucleoporin_FG2 pfam15967
Nucleoporin FG repeated region; Nucleoporin_FG2, or nucleoporin p58/p45, is a family of ...
955-1147 9.26e-04

Nucleoporin FG repeated region; Nucleoporin_FG2, or nucleoporin p58/p45, is a family of chordate nucleoporins. The proteins carry many repeats of the FG sequence motif.


Pssm-ID: 435043 [Multi-domain]  Cd Length: 586  Bit Score: 43.50  E-value: 9.26e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899  955 FDGSPSTGAGFGGALNTSASFGSALNTSAG--FGGAMSTSADFGSTLSTSVCFGGSPgtsvsFGSALNTSAGFGGAVSTS 1032
Cdd:pfam15967    6 FGGGPGSTATAGGGFSFGAAAASNPGSTGGfsFGTLGAAPAATATTTTATLGLGGGL-----FGQKPATGFTFGTPASST 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1033 TDFGGTLSTSVCFGGSPSTSAGFSGALNTNA------------------SFGCAISTSAGFSGAVGTSAGFSGVPSTNPG 1094
Cdd:pfam15967   81 AATGPTGLTLGTPAATTAASTGFSLGFNKPAasatpfslpasstsggglSLGSVLTSTAAQQGATGFTLNLGGTPATTTA 160
                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 1622971899 1095 FGGAFN---TSAGFGGALSTTTDFGGTPNNSIGfGAAPSTSVSFGGAHSTSLCFGG 1147
Cdd:pfam15967  161 VSTGLSlgsTLTSLGGSLFQNTNSTGLGQTTLG-LTLLATSTAPVSAPAASEGLGG 215
Hia COG5295
Autotransporter adhesin [Intracellular trafficking, secretion, and vesicular transport, ...
714-1104 1.29e-03

Autotransporter adhesin [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures];


Pssm-ID: 444098 [Multi-domain]  Cd Length: 785  Bit Score: 43.22  E-value: 1.29e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899  714 NADASTSVNFSRGAGTRAGFSDGASISFNGAPSSSGGPGITFGGAPSSSASFSNTASISFGGTLSTSSSFSSAASISFGG 793
Cdd:COG5295    200 AGGTASAAASASSSATGTSASVGVNAGAATGSAASAGGSASAGAASGNATTASASSVSGSAVAAGTASTATTASTTAASG 279
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899  794 APSTSTSFSSEASISFGGTPCTSASFSGGVSSSFSGPLNTSATFSGAASSGFGGTLSTTAGFSSVLSTSTSFGSAPTTNT 873
Cdd:COG5295    280 AAGTATAAAGGDAAAAGSASSTGAANATAGGGNAGSGGGGAAALGSAGGSSGVGTASGASAAAATNDGTANGAGTSAAAD 359
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899  874 VFSSALSTSTGFGGTLSTSV------CFGGSPSSSGSFGGTLSTSICFGGSPCTSTGFGGTLSTSVSFGGPSSTSANCGG 947
Cdd:COG5295    360 ATSGGGAGGGGAAATSSSGGsataagNAAGAAGAGSAGSGGSSTGASAGGGASAAGGAAAGSAAAGTSSNTSAVGASNGA 439
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899  948 TLSTSICFDGSPSTGAGFGGALNTSASFGSALNTSAGFGGAMSTSADFGSTLSTSVCFGGSPGTSVSFGSALNTSAGFGG 1027
Cdd:COG5295    440 SGTSSSASSAGAAGGGTAGAGGAANVGAATTAASAAATAAAATSSAAIAGATATGAGAAAGGAGAGAAGGAGSAAAGGAA 519
                          330       340       350       360       370       380       390
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1622971899 1028 AVSTSTDFGGTLSTSVCFGGSPSTSAGFSGALNTNASFGCAISTSAGFSGAVGTSAGFSGVPSTNPGFGGAFNTSAG 1104
Cdd:COG5295    520 NAAAASGATATAGSAGGGAAAAAGGGSTTAATGTNSVAVGNNTATGANSVALGAGSVASGANSVSVGAAGAENVAAG 596
PPE COG5651
PPE-repeat protein [Function unknown];
1165-1388 2.00e-03

PPE-repeat protein [Function unknown];


Pssm-ID: 444372 [Multi-domain]  Cd Length: 385  Bit Score: 42.19  E-value: 2.00e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1165 FGGPPSTSACFSGATSPSFGDGPSTSTGFSFGN-GLSTSAGFG-GGLNTSAGfggglgtSAGFSGDLSTSSGFDGGLGTS 1242
Cdd:COG5651    167 FTQPPPTITNPGGLLGAQNAGSGNTSSNPGFANlGLTGLNQVGiGGLNSGSG-------PIGLNSGPGNTGFAGTGAAAG 239
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1243 AGFSGGPGTSTGFGGGLGTSAGFSGGLGTGAGFGGGLVTSDGFGGGLGTNASFGSTLGTGAGFSGGLSTSDGFGSRPNAS 1322
Cdd:COG5651    240 AAAAAAAAAAAAGAGASAALASLAATLLNASSLGLAATAASSAATNLGLAGSPLGLAGGGAGAAAATGLGLGAGGAAGAA 319
                          170       180       190       200       210       220
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1622971899 1323 FDRGLSTIIGFGSGSNTSTGFIGEPSTSTGFHSGPSSIVGFSGGPSTGVGFcSGPSISGFSGGPST 1388
Cdd:COG5651    320 GATGAGAALGAGAAAAAAGAAAGAGAAAAAAAGGAGGGGGGALGAGGGGGS-AGAAAGAASGGGAA 384
dermokine cd21118
dermokine; Dermokine, also known as epidermis-specific secreted protein SK30/SK89, is a ...
1217-1420 3.79e-03

dermokine; Dermokine, also known as epidermis-specific secreted protein SK30/SK89, is a skin-specific glycoprotein that may play a regulatory role in the crosstalk between barrier dysfunction and inflammation, and therefore play a role in inflammatory diseases such as psoriasis. Dermokine is one of the most highly expressed proteins in differentiating keratinocytes, found mainly in the spinous and granular layers of the epidermis, but also in the epithelia of the small intestine, macrophages of the lung, and endothelial cells of the lung. Mouse dermokine has been reported to be encoded by 22 exons, and its expression leads to alpha, beta, and gamma transcripts.


Pssm-ID: 411053 [Multi-domain]  Cd Length: 495  Bit Score: 41.52  E-value: 3.79e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1217 GGLGTSAGFSGDLSTSSGFDGGLGTSaGFSGGPGTSTGFGGGLGTsaGFSGGLGTGAGFGGGLVTSDGFGGGLGTNASFG 1296
Cdd:cd21118    125 GGHGAYGSQGGPGVQGHGIPGGTGGP-WASGGNYGTNSLGGSVGQ--GGNGGPLNYGTNSQGAVAQPGYGTVRGNNQNSG 201
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1297 STLGTGAGFSGGLSTSDGfGSRPNASFDRGLSTIIGFGSGSNTSTGFIGEPSTSTGFHSGPSSivGFSGGPSTGVGFCSG 1376
Cdd:cd21118    202 CTNPPPSGSHESFSNSGG-SSSSGSSGSQGSHGSNGQGSSGSSGGQGNGGNNGSSSSNSGNSG--GSNGGSSGNSGSGSG 278
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|....*..
gi 1622971899 1377 PSISGFSGGPSTGAGFGGGPNTGAGFG---GGPSTSAGFGSGATSLG 1420
Cdd:cd21118    279 GSSSGGSNGWGGSSSSGGSGGSGGGNKpecNNPGNDVRMAGGGGSQG 325
Nucleoporin_FG2 pfam15967
Nucleoporin FG repeated region; Nucleoporin_FG2, or nucleoporin p58/p45, is a family of ...
1191-1427 4.05e-03

Nucleoporin FG repeated region; Nucleoporin_FG2, or nucleoporin p58/p45, is a family of chordate nucleoporins. The proteins carry many repeats of the FG sequence motif.


Pssm-ID: 435043 [Multi-domain]  Cd Length: 586  Bit Score: 41.58  E-value: 4.05e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1191 TGFSFGNGLSTSAGFGGGLNTSAGFGGGLGTSAGFsgdlstssGFDGGLGTSAGFSGGPGTSTGFGGGL---GTSAGFSg 1267
Cdd:pfam15967    2 SGFSFGGGPGSTATAGGGFSFGAAAASNPGSTGGF--------SFGTLGAAPAATATTTTATLGLGGGLfgqKPATGFT- 72
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1268 glgtgagfggglvtsdgFGGGLGTNASFGSTLGTGAGFSGGLSTSDGFG---SRPNAS---FDRGLSTIIGFGSGSNTST 1341
Cdd:pfam15967   73 -----------------FGTPASSTAATGPTGLTLGTPAATTAASTGFSlgfNKPAASatpFSLPASSTSGGGLSLGSVL 135
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1342 GFIGEPSTSTGFHSGPSSIVGFSGGPSTGVGFcsGPSISGFSGGPSTGAGFGGGPNTGAGFGGGPSTSAGFGSGATSLGA 1421
Cdd:pfam15967  136 TSTAAQQGATGFTLNLGGTPATTTAVSTGLSL--GSTLTSLGGSLFQNTNSTGLGQTTLGLTLLATSTAPVSAPAASEGL 213

                   ....*.
gi 1622971899 1422 CGFSYG 1427
Cdd:pfam15967  214 GGLDFS 219
PPE COG5651
PPE-repeat protein [Function unknown];
850-1082 4.14e-03

PPE-repeat protein [Function unknown];


Pssm-ID: 444372 [Multi-domain]  Cd Length: 385  Bit Score: 41.42  E-value: 4.14e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899  850 STTAGFSSVLSTSTSFGSAPTTNTVFSSALSTSTGFGGTLSTSvcfggsPSSSGSFGGTLSTSICFGGSPCTSTGFGGTl 929
Cdd:COG5651    162 VALTPFTQPPPTITNPGGLLGAQNAGSGNTSSNPGFANLGLTG------LNQVGIGGLNSGSGPIGLNSGPGNTGFAGT- 234
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899  930 STSVSFGGPSSTSANCGGTLSTSICFDGSPSTGAGFGGALNTSASFGSALNTSAGFGGAMSTSADFGSTLSTSvcFGGSP 1009
Cdd:COG5651    235 GAAAGAAAAAAAAAAAAGAGASAALASLAATLLNASSLGLAATAASSAATNLGLAGSPLGLAGGGAGAAAATG--LGLGA 312
                          170       180       190       200       210       220       230
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1622971899 1010 GTSVSFGSALNTSAGFGGAVSTSTDFGGTLSTSVCFGGSPSTSAGFSGALNTNASFGCAISTSAGFSGAVGTS 1082
Cdd:COG5651    313 GGAAGAAGATGAGAALGAGAAAAAAGAAAGAGAAAAAAAGGAGGGGGGALGAGGGGGSAGAAAGAASGGGAAA 385
Nucleoporin_FG2 pfam15967
Nucleoporin FG repeated region; Nucleoporin_FG2, or nucleoporin p58/p45, is a family of ...
1182-1394 5.10e-03

Nucleoporin FG repeated region; Nucleoporin_FG2, or nucleoporin p58/p45, is a family of chordate nucleoporins. The proteins carry many repeats of the FG sequence motif.


Pssm-ID: 435043 [Multi-domain]  Cd Length: 586  Bit Score: 41.19  E-value: 5.10e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1182 SFGDGPSTST----GFSFGNGLSTSAGFGGGLntsaGFGGGLGTSAGFSGDLSTSSGFDGGL---GTSAGFS-GGPGTST 1253
Cdd:pfam15967    5 SFGGGPGSTAtaggGFSFGAAAASNPGSTGGF----SFGTLGAAPAATATTTTATLGLGGGLfgqKPATGFTfGTPASST 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1254 GFGGGLGTSAGFSGGLGTGAGFGgglvtSDGFGGGLGTNASFGSTLGTGAGfsGGLSTSDGFGSRPNASFDRGLSTIIGf 1333
Cdd:pfam15967   81 AATGPTGLTLGTPAATTAASTGF-----SLGFNKPAASATPFSLPASSTSG--GGLSLGSVLTSTAAQQGATGFTLNLG- 152
                          170       180       190       200       210       220
                   ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1622971899 1334 GSGSNTSTGFIGEP--STSTGFHSGPSSIVGFSGGPSTGVGFCSGPSISGFSGGPSTGAGFGG 1394
Cdd:pfam15967  153 GTPATTTAVSTGLSlgSTLTSLGGSLFQNTNSTGLGQTTLGLTLLATSTAPVSAPAASEGLGG 215
Nucleoporin_FG2 pfam15967
Nucleoporin FG repeated region; Nucleoporin_FG2, or nucleoporin p58/p45, is a family of ...
985-1186 9.58e-03

Nucleoporin FG repeated region; Nucleoporin_FG2, or nucleoporin p58/p45, is a family of chordate nucleoporins. The proteins carry many repeats of the FG sequence motif.


Pssm-ID: 435043 [Multi-domain]  Cd Length: 586  Bit Score: 40.42  E-value: 9.58e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899  985 FGGAMSTSADFGSTLSTSVCFGGSPGTS--VSFGSALNTSAGFGGAVSTSTDFGGTLstsvcFGGSPSTSAGFSGALNTN 1062
Cdd:pfam15967    6 FGGGPGSTATAGGGFSFGAAAASNPGSTggFSFGTLGAAPAATATTTTATLGLGGGL-----FGQKPATGFTFGTPASST 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1622971899 1063 ASFGCAIST----SAGFSGAVGTSAGFSGVPSTNPGFGGAFNTSAG----FGGALSTTTDFGGTPNNSIGFGAAPSTSVs 1134
Cdd:pfam15967   81 AATGPTGLTlgtpAATTAASTGFSLGFNKPAASATPFSLPASSTSGgglsLGSVLTSTAAQQGATGFTLNLGGTPATTT- 159
                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|....*...
gi 1622971899 1135 fggAHSTSLCFGGAPST--SLCFGSASNTNL----CFGGPPSTSACFSGATSPSFGDG 1186
Cdd:pfam15967  160 ---AVSTGLSLGSTLTSlgGSLFQNTNSTGLgqttLGLTLLATSTAPVSAPAASEGLG 214
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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