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    PRP1 proline-rich protein 1 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 841938, updated on 18-Sep-2024

    Summary

    Official Symbol
    PRP1
    Official Full Name
    proline-rich protein 1
    Primary source
    TAIR:AT1G54970
    Locus tag
    AT1G54970
    See related
    Araport:AT1G54970
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATPRP1; F14C21.50; F14C21_50; proline-rich protein 1; RHS7; ROOT HAIR SPECIFIC 7
    Summary
    encodes a proline-rich protein that is specifically expressed in the root.
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    Genomic context

    See PRP1 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    2
    Sequence:
    Chromosome: 1; NC_003070.9 (20504901..20506504)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene NPK1-related protein kinase 2 Neighboring gene Plant invertase/pectin methylesterase inhibitor superfamily protein Neighboring gene miscRNA

    General gene information

    NM_104371.2

    Gene Ontology Provided by TAIR

    Component Evidence Code Pubs
    located_in plant-type cell wall PubMed 

    General protein information

    Preferred Names
    proline-rich protein 1
    NP_175895.1
    • proline-rich protein 1 (PRP1); CONTAINS InterPro DOMAIN/s: Pollen Ole e 1 allergen/extensin (InterPro:IPR006041); BEST Arabidopsis thaliana protein match is: proline-rich protein 3 (TAIR:AT3G62680.1); Has 45300 Blast hits to 21383 proteins in 1373 species: Archae - 227; Bacteria - 7064; Metazoa - 17109; Fungi - 5177; Plants - 7680; Viruses - 1757; Other Eukaryotes - 6286 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      20504901..20506504
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_104371.2 → NP_175895.1  proline-rich protein 1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_175895.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9FZ35, Q9M7P1
      UniProtKB/TrEMBL
      A0A178WBR5, A0A5S9WPU3, A0A654EK93
      Conserved Domains (2) summary
      pfam01190
      Location:214 → 296
      Pollen_Ole_e_I; Pollen proteins Ole e I like
      NF033804
      Location:26 → 170
      Streccoc_I_II; antigen I/II family LPXTG-anchored adhesin
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