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    5'-AMP-activated protein kinase beta-2 subunit protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 817350, updated on 18-Sep-2024

    Summary

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    Official Full Name
    5'-AMP-activated protein kinase beta-2 subunit protein
    Primary source
    TAIR:AT2G28060
    Locus tag
    AT2G28060
    See related
    Araport:AT2G28060
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F24D13.15; F24D13_15; KINbeta3
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    3
    Sequence:
    Chromosome: 2; NC_003071.7 (11949871..11952253, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ABC-2 type transporter family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A role for the carbohydrate-binding module (CBM) in regulatory SnRK1 subunits: the effect of maltose on SnRK1 activity. Ruiz-Gayosso A, et al. Plant J, 2018 Oct. PMID 30003611
    2. SnRK1 from Arabidopsis thaliana is an atypical AMPK. Emanuelle S, et al. Plant J, 2015 Apr. PMID 25736509
    3. AKINbetagamma contributes to SnRK1 heterotrimeric complexes and interacts with two proteins implicated in plant pathogen resistance through its KIS/GBD sequence. Gissot L, et al. Plant Physiol, 2006 Nov. PMID 17028154, Free PMC Article
    4. AKINbeta3, a plant specific SnRK1 protein, is lacking domains present in yeast and mammals non-catalytic beta-subunits. Gissot L, et al. Plant Mol Biol, 2004 Nov. PMID 15803412
    5. An abscisic acid-responsive protein interaction network for sucrose non-fermenting related kinase1 in abiotic stress response. Carianopol CS, et al. Commun Biol, 2020 Mar 26. PMID 32218501, Free PMC Article

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_001336140.1
    NM_001336141.1
    NM_001336142.1
    NM_128365.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables maltose binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    enables protein kinase regulator activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables protein kinase regulator activity IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in chloroplast starch grain IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in cytoplasm IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    part_of nucleotide-activated protein kinase complex IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    5'-AMP-activated protein kinase beta-2 subunit protein
    NP_565664.1
    • 5'-AMP-activated protein kinase beta-2 subunit protein; CONTAINS InterPro DOMAIN/s: 5-AMP-activated protein kinase, beta subunit, interaction domain (InterPro:IPR006828); BEST Arabidopsis thaliana protein match is: 5'-AMP-activated protein kinase beta-2 subunit protein (TAIR:AT5G21170.2); Has 379 Blast hits to 379 proteins in 106 species: Archae - 0; Bacteria - 0; Metazoa - 199; Fungi - 21; Plants - 141; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      11949871..11952253 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_128365.4 → NP_565664.1  5'-AMP-activated protein kinase beta-2 subunit protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_565664.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9ZUU8
      UniProtKB/TrEMBL
      A0A178VXP7, A0A5S9X216
      Conserved Domains (1) summary
      smart01010
      Location:21 → 106
      AMPKBI; 5'-AMP-activated protein kinase beta subunit, interation domain

    2. NM_001336140.1 → NP_001323592.1  5'-AMP-activated protein kinase beta-2 subunit protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9ZUU8
      UniProtKB/TrEMBL
      A0A178VXP7, A0A5S9X216
      Conserved Domains (1) summary
      smart01010
      Location:21 → 106
      AMPKBI; 5'-AMP-activated protein kinase beta subunit, interation domain

    3. NM_001336142.1 → NP_001323590.1  5'-AMP-activated protein kinase beta-2 subunit protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9ZUU8
      UniProtKB/TrEMBL
      A0A178VXP7, A0A5S9X216
      Conserved Domains (1) summary
      smart01010
      Location:21 → 106
      AMPKBI; 5'-AMP-activated protein kinase beta subunit, interation domain

    4. NM_001336141.1 → NP_001323591.1  5'-AMP-activated protein kinase beta-2 subunit protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9ZUU8
      UniProtKB/TrEMBL
      A0A178VXP7, A0A5S9X216
      Conserved Domains (1) summary
      smart01010
      Location:21 → 106
      AMPKBI; 5'-AMP-activated protein kinase beta subunit, interation domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9ZUU8.1

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